RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 DOT1LQ8TEK3 1739 aa26■■□□□ 1.75
ACTN4-208ENST00000497637 USP54Q70EL1 1684 aa26■■□□□ 1.75
ACTN4-208ENST00000497637 NMRK2Q9NPI5 230 aa25.99■■□□□ 1.75
ACTN4-208ENST00000497637 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
ACTN4-208ENST00000497637 COG3Q96JB2 828 aa25.98■■□□□ 1.75
ACTN4-208ENST00000497637 SALL2Q9Y467 1007 aaPredicted RBP25.98■■□□□ 1.75
ACTN4-208ENST00000497637 FAM208AQ9UK61 1670 aaKnown RBP25.97■■□□□ 1.75
ACTN4-208ENST00000497637 PCNTO95613 3336 aa25.97■■□□□ 1.75
ACTN4-208ENST00000497637 COL3A1P02461 1466 aaPredicted RBP25.97■■□□□ 1.75
ACTN4-208ENST00000497637 PALLDQ8WX93 1383 aa25.96■■□□□ 1.75
ACTN4-208ENST00000497637 FKBP8Q14318 412 aa25.96■■□□□ 1.75
ACTN4-208ENST00000497637 CCDC146Q8IYE0 955 aa25.96■■□□□ 1.75
ACTN4-208ENST00000497637 SMARCC1Q92922 1105 aaPredicted RBP25.96■■□□□ 1.75
ACTN4-208ENST00000497637 ZNF521Q96K83 1311 aa25.95■■□□□ 1.75
ACTN4-208ENST00000497637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.95■■□□□ 1.74
ACTN4-208ENST00000497637 SSFA2P28290 1259 aa25.95■■□□□ 1.74
ACTN4-208ENST00000497637 RUNDC1Q96C34 613 aa25.95■■□□□ 1.74
ACTN4-208ENST00000497637 POLKQ9UBT6 870 aa25.95■■□□□ 1.74
ACTN4-208ENST00000497637 WDR90Q96KV7 1748 aa25.94■■□□□ 1.74
ACTN4-208ENST00000497637 C5P01031 1676 aa25.94■■□□□ 1.74
ACTN4-208ENST00000497637 APAF1O14727 1248 aa25.94■■□□□ 1.74
ACTN4-208ENST00000497637 TGFB2P61812 414 aa25.94■■□□□ 1.74
ACTN4-208ENST00000497637 PHF14O94880 888 aa25.92■■□□□ 1.74
ACTN4-208ENST00000497637 HTRA3P83110 453 aa25.92■■□□□ 1.74
ACTN4-208ENST00000497637 NCBP3Q53F19 620 aaKnown RBP25.92■■□□□ 1.74
ACTN4-208ENST00000497637 ARHGAP27Q6ZUM4 889 aa25.92■■□□□ 1.74
ACTN4-208ENST00000497637 RAPGEF4Q8WZA2 1011 aa25.91■■□□□ 1.74
ACTN4-208ENST00000497637 BCS1LQ9Y276 419 aa25.91■■□□□ 1.74
ACTN4-208ENST00000497637 MEGF6O75095 1541 aa25.9■■□□□ 1.74
ACTN4-208ENST00000497637 DIAPH1O60610 1272 aaKnown RBP25.9■■□□□ 1.74
ACTN4-208ENST00000497637 HOXC9P31274 260 aa25.9■■□□□ 1.74
ACTN4-208ENST00000497637 AMPHP49418 695 aa25.9■■□□□ 1.74
ACTN4-208ENST00000497637 U2AF1L5P0DN76 240 aaPredicted RBP25.89■■□□□ 1.74
ACTN4-208ENST00000497637 U2AF1Q01081 240 aaKnown RBP eCLIP25.89■■□□□ 1.74
ACTN4-208ENST00000497637 MPRIPQ6WCQ1 1025 aa25.89■■□□□ 1.74
ACTN4-208ENST00000497637 CDCA7LQ96GN5 454 aa25.89■■□□□ 1.74
ACTN4-208ENST00000497637 PLEKHG2Q9H7P9 1386 aa25.89■■□□□ 1.74
ACTN4-208ENST00000497637 RNF123Q5XPI4 1314 aa25.88■■□□□ 1.73
ACTN4-208ENST00000497637 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
ACTN4-208ENST00000497637 AMIGO3Q86WK7 504 aa25.88■■□□□ 1.73
ACTN4-208ENST00000497637 ERICH6BQ5W0A0 696 aa25.87■■□□□ 1.73
ACTN4-208ENST00000497637 MAP3K19Q56UN5 1328 aa25.87■■□□□ 1.73
ACTN4-208ENST00000497637 PCDH11XQ9BZA7 1347 aa25.87■■□□□ 1.73
ACTN4-208ENST00000497637 PCDH11YQ9BZA8 1340 aa25.87■■□□□ 1.73
ACTN4-208ENST00000497637 C4BP0C0L5 1744 aa25.85■■□□□ 1.73
ACTN4-208ENST00000497637 PXDNLA1KZ92 1463 aa25.85■■□□□ 1.73
ACTN4-208ENST00000497637 MMP10P09238 476 aa25.85■■□□□ 1.73
ACTN4-208ENST00000497637 FBLN1P23142 703 aa25.85■■□□□ 1.73
ACTN4-208ENST00000497637 GOLGA2Q08379 1002 aa25.85■■□□□ 1.73
ACTN4-208ENST00000497637 TATP17735 454 aaPredicted RBP25.84■■□□□ 1.73
ACTN4-208ENST00000497637 C9orf131Q5VYM1 1079 aa25.83■■□□□ 1.73
ACTN4-208ENST00000497637 SMC1BQ8NDV3 1235 aa25.83■■□□□ 1.73
ACTN4-208ENST00000497637 PNNQ9H307 717 aaKnown RBP25.83■■□□□ 1.73
ACTN4-208ENST00000497637 EMILIN1Q9Y6C2 1016 aa25.83■■□□□ 1.73
ACTN4-208ENST00000497637 TAF1LQ8IZX4 1826 aa25.83■■□□□ 1.73
ACTN4-208ENST00000497637 A0A0G2JLW4 131 aa25.82■■□□□ 1.72
ACTN4-208ENST00000497637 U2SURPO15042 1029 aaKnown RBP25.82■■□□□ 1.72
ACTN4-208ENST00000497637 NBPF6Q5VWK0 638 aa25.82■■□□□ 1.72
ACTN4-208ENST00000497637 NBPF4Q96M43 638 aa25.82■■□□□ 1.72
ACTN4-208ENST00000497637 C10orf71Q711Q0 1435 aa25.81■■□□□ 1.72
ACTN4-208ENST00000497637 FCHSD2O94868 740 aa25.81■■□□□ 1.72
ACTN4-208ENST00000497637 SLFN5Q08AF3 891 aa25.81■■□□□ 1.72
ACTN4-208ENST00000497637 TRMT2AQ8IZ69 625 aaKnown RBP25.81■■□□□ 1.72
ACTN4-208ENST00000497637 PLEKHF1Q96S99 279 aa25.81■■□□□ 1.72
ACTN4-208ENST00000497637 PPM1GO15355 546 aaPredicted RBP25.8■■□□□ 1.72
ACTN4-208ENST00000497637 SLC34A2O95436 690 aa25.8■■□□□ 1.72
ACTN4-208ENST00000497637 CCDC27Q2M243 656 aa25.8■■□□□ 1.72
ACTN4-208ENST00000497637 NLGN1Q8N2Q7 840 aa25.8■■□□□ 1.72
ACTN4-208ENST00000497637 LOC102724428A0A0B4J2F2 783 aa25.79■■□□□ 1.72
ACTN4-208ENST00000497637 HSPA1AP0DMV8 641 aaKnown RBP25.79■■□□□ 1.72
ACTN4-208ENST00000497637 HSPA1BP0DMV9 641 aaKnown RBP25.79■■□□□ 1.72
ACTN4-208ENST00000497637 IL13P35225 146 aa25.79■■□□□ 1.72
ACTN4-208ENST00000497637 SIK1P57059 783 aa25.79■■□□□ 1.72
ACTN4-208ENST00000497637 SMIM5Q71RC9 77 aa25.79■■□□□ 1.72
ACTN4-208ENST00000497637 RCAN3Q9UKA8 241 aa25.79■■□□□ 1.72
ACTN4-208ENST00000497637 RTL1A6NKG5 1358 aa25.79■■□□□ 1.72
ACTN4-208ENST00000497637 GNPATO15228 680 aa25.78■■□□□ 1.72
ACTN4-208ENST00000497637 DUSP27Q5VZP5 1158 aa25.78■■□□□ 1.72
ACTN4-208ENST00000497637 MAP2P11137 1827 aaKnown RBP25.78■■□□□ 1.72
ACTN4-208ENST00000497637 UBR3Q6ZT12 1888 aa25.78■■□□□ 1.72
ACTN4-208ENST00000497637 RRS1Q15050 365 aaKnown RBP25.77■■□□□ 1.72
ACTN4-208ENST00000497637 WWC1Q8IX03 1113 aa25.77■■□□□ 1.72
ACTN4-208ENST00000497637 LINC00116Q8NCU8 138 aa25.77■■□□□ 1.72
ACTN4-208ENST00000497637 CCDC87Q9NVE4 849 aa25.77■■□□□ 1.72
ACTN4-208ENST00000497637 E9PSI1 815 aa25.76■■□□□ 1.71
ACTN4-208ENST00000497637 DPEP1P16444 411 aa25.76■■□□□ 1.71
ACTN4-208ENST00000497637 PIGBQ92521 554 aa25.76■■□□□ 1.71
ACTN4-208ENST00000497637 RRAGCQ9HB90 399 aa25.76■■□□□ 1.71
ACTN4-208ENST00000497637 TOGARAM1Q9Y4F4 1720 aa25.76■■□□□ 1.71
ACTN4-208ENST00000497637 WDR63Q8IWG1 891 aa25.75■■□□□ 1.71
ACTN4-208ENST00000497637 USHBP1Q8N6Y0 703 aa25.75■■□□□ 1.71
ACTN4-208ENST00000497637 CYP27B1O15528 508 aa25.74■■□□□ 1.71
ACTN4-208ENST00000497637 KIF13BQ9NQT8 1826 aa25.72■■□□□ 1.71
ACTN4-208ENST00000497637 TRAPPC3LQ5T215 181 aa25.72■■□□□ 1.71
ACTN4-208ENST00000497637 RSPH6AQ9H0K4 717 aa25.72■■□□□ 1.71
ACTN4-208ENST00000497637 KCPQ6ZWJ8 1503 aa25.72■■□□□ 1.71
ACTN4-208ENST00000497637 MAPK8IP3Q9UPT6 1336 aa25.71■■□□□ 1.71
ACTN4-208ENST00000497637 IRX6P78412 446 aaPredicted RBP25.71■■□□□ 1.71
ACTN4-208ENST00000497637 RNF181Q9P0P0 153 aa25.71■■□□□ 1.71
ACTN4-208ENST00000497637 PIM2Q9P1W9 311 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms