RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 ZCCHC11Q5TAX3 1644 aaKnown RBP12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 RAPGEF6Q8TEU7 1601 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 A0A087WWV3 80 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 SMTNL1A8MU46 457 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 TPM3P06753 285 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 SLFN14P0C7P3 912 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 TERF2Q15554 542 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 DNAJC25Q9H1X3 360 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 SYNMO15061 1565 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 C10orf67Q8IYJ2 551 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 ESYT1Q9BSJ8 1104 aa12.64□□□□□ -0.39
TRAPPC12-223ENST00000497597 TAF7LQ5H9L4 462 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 MLECQ14165 292 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 CWC27Q6UX04 472 aaKnown RBP12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 ANKRD7Q92527 254 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
TRAPPC12-223ENST00000497597 CAPN2P17655 700 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 TYRO3Q06418 890 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 CEP85Q6P2H3 762 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 KIF18AQ8NI77 898 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 DDX41Q9UJV9 622 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 GJB2P29033 226 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 ZNF165P49910 485 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 EFCAB2Q5VUJ9 269 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 ANKRD44Q8N8A2 993 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 FAM200AQ8TCP9 573 aa12.62□□□□□ -0.39
TRAPPC12-223ENST00000497597 GLI2P10070 1586 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 F13A1P00488 732 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 LIG1P18858 919 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 KMT5BQ4FZB7 885 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 ARHGAP5Q13017 1502 aa12.61□□□□□ -0.39
TRAPPC12-223ENST00000497597 SKILP12757 684 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 HNRNPH2P55795 449 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 FBXO38Q6PIJ6 1188 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 CACTINQ8WUQ7 758 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 KANK1Q14678 1352 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 AK2P54819 239 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 ERCC6LQ2NKX8 1250 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 MCM10Q7L590 875 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 RPAP2Q8IXW5 612 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 JAKMIP1Q96N16 626 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 USP27XA6NNY8 438 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 TEX35Q5T0J7 233 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 ZSCAN25Q6NSZ9 544 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 ERCC4Q92889 916 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 PLEKHF1Q96S99 279 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 CBX8Q9HC52 389 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 ADGBQ8N7X0 1667 aa12.6□□□□□ -0.39
TRAPPC12-223ENST00000497597 PTPRGP23470 1445 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 MNS1Q8NEH6 495 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 CD109Q6YHK3 1445 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 KRT85P78386 507 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 RRS1Q15050 365 aaKnown RBP12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 CCDC34Q96HJ3 373 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 LRRCC1Q9C099 1032 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 RSPH14Q9UHP6 348 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 STAG3Q9UJ98 1225 aa12.59□□□□□ -0.39
TRAPPC12-223ENST00000497597 TCHHQ07283 1943 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 PTPRTO14522 1441 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 ANKRD36BQ8N2N9 1353 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 FYB1O15117 783 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 CABP1Q9NZU7 370 aa12.58□□□□□ -0.4
TRAPPC12-223ENST00000497597 SURF6O75683 361 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 SMC2O95347 1197 aa12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 CHMLP26374 656 aa12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 ARHGAP29Q52LW3 1261 aa12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 PRPF40BQ6NWY9 871 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 GPATCH11Q8N954 259 aa12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 PPRC1Q5VV67 1664 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
TRAPPC12-223ENST00000497597 FCHSD2O94868 740 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 SYT10Q6XYQ8 523 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 KRBA2Q6ZNG9 492 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 DDX11Q96FC9 970 aa12.56□□□□□ -0.4
TRAPPC12-223ENST00000497597 INTS4Q96HW7 963 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms