RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 JUNDP17535 347 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 RASA1P20936 1047 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 MMP16P51512 607 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 ARHGAP4P98171 946 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 PTK2Q05397 1052 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 SF3B2Q13435 895 aaKnown RBP3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 LDLRAD1Q5T700 205 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 FAM177A1Q8N128 213 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 OGFOD1Q8N543 542 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 GIPC2Q8TF65 315 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 UBXN4Q92575 508 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 EVA1BQ9NVM1 165 aa3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 RNF17Q9BXT8 1623 aaKnown RBP3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 DENND4BO75064 1496 aaPredicted RBP3.79□□□□□ -1.8
CKS1BP2-201ENST00000497342 CARMIL2Q6F5E8 1435 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 C3P01024 1663 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 DXOO77932 396 aaKnown RBP3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 WEE1P30291 646 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 PBX2P40425 430 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 HDGFP51858 240 aaKnown RBP3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 DPYDQ12882 1025 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 EML3Q32P44 896 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 SLFNL1Q499Z3 407 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 POTEEQ6S8J3 1075 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 SH3BP5LQ7L8J4 393 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 SH3RF1Q7Z6J0 888 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 DEFB132Q7Z7B7 95 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 RBCK1Q9BYM8 510 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 QTRT2Q9H974 415 aaKnown RBP3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 DNAAF2Q9NVR5 837 aaKnown RBP3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 USP35Q9P2H5 1018 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 DCTN4Q9UJW0 460 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 ERICH3Q5RHP9 1530 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 ZFYVE16Q7Z3T8 1539 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 MAGI2Q86UL8 1455 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 PCNTO95613 3336 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 CUL9Q8IWT3 2517 aa3.78□□□□□ -1.8
CKS1BP2-201ENST00000497342 AFF2P51816 1311 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 EFCAB5A4FU69 1503 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 TK2O00142 265 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 ARHGAP33O14559 1287 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 IGHA2P01877 340 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 HSPA6P17066 643 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 SEC13P55735 322 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 SF3A1Q15459 793 aaKnown RBP3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 NBPF14Q5TI25 921 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 SAMD7Q7Z3H4 446 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 ARMC5Q96C12 935 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 SPATA32Q96LK8 384 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 CITED4Q96RK1 184 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 KCNK17Q96T54 332 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 NOD1Q9Y239 953 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 VPS9D1Q9Y2B5 631 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 PCDHGA11Q9Y5H2 935 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 NPATQ14207 1427 aa3.77□□□□□ -1.81
CKS1BP2-201ENST00000497342 ZMYM4Q5VZL5 1548 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 RICTORQ6R327 1708 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 ATP10AO60312 1499 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 ESPNB1AK53 854 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 WASLO00401 505 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 SNPHO15079 494 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 PTCD1O75127 700 aaKnown RBP3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 FGD1P98174 961 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 FKBP4Q02790 459 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 FMR1Q06787 632 aaKnown RBP eCLIP3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 KCNH2Q12809 1159 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 BLOC1S3Q6QNY0 202 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 RNF19BQ6ZMZ0 732 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 ZSCAN29Q8IWY8 852 aaPredicted RBP3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 SEPT12Q8IYM1 358 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 DEPDC4Q8N2C3 294 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 SLC43A3Q8NBI5 491 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 TSC1Q92574 1164 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 NGLY1Q96IV0 654 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 MAP10Q9P2G4 905 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 KIAA1024Q9UPX6 916 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 NWD1Q149M9 1564 aa3.76□□□□□ -1.81
CKS1BP2-201ENST00000497342 CDK13Q14004 1512 aaKnown RBP3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 CCNYL3P0C7X3 344 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 DSC3Q14574 896 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 MAMSTRQ6ZN01 415 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 ALKBH8Q96BT7 664 aaKnown RBP3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 CCDC85AQ96PX6 553 aaPredicted RBP3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 GMLQ99445 158 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 C1QTNF2Q9BXJ5 285 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 METTL5Q9NRN9 209 aaKnown RBP3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 RTEL1-TNFRSF6BF6WH68 1400 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 BLMP54132 1417 aaPredicted RBP3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 C9orf84Q5VXU9 1444 aa3.75□□□□□ -1.81
CKS1BP2-201ENST00000497342 SCAF11Q99590 1463 aaKnown RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 SCAMP3O14828 347 aaKnown RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 TREHO43280 583 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 FOXO3O43524 673 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 FMNL1O95466 1100 aaPredicted RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 ITGAEP38570 1179 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 RAD51AP2Q09MP3 1159 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 NAALADL2Q58DX5 795 aa3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 METTL16Q86W50 562 aaKnown RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 TRMT44Q8IYL2 757 aaKnown RBP3.74□□□□□ -1.81
CKS1BP2-201ENST00000497342 STAG2Q8N3U4 1231 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms