RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 PNNQ9H307 717 aaKnown RBP27.63■■■□□ 2.01
CCDC12-207ENST00000494655 C4BP0C0L5 1744 aa27.63■■■□□ 2.01
CCDC12-207ENST00000494655 LOC102724428A0A0B4J2F2 783 aa27.62■■■□□ 2.01
CCDC12-207ENST00000494655 GNAT3A8MTJ3 354 aa27.62■■■□□ 2.01
CCDC12-207ENST00000494655 SIK1P57059 783 aa27.62■■■□□ 2.01
CCDC12-207ENST00000494655 AKT1S1Q96B36 256 aa27.62■■■□□ 2.01
CCDC12-207ENST00000494655 ATG3Q9NT62 314 aa27.62■■■□□ 2.01
CCDC12-207ENST00000494655 RNMTO43148 476 aaKnown RBP27.61■■■□□ 2.01
CCDC12-207ENST00000494655 NFATC2IPQ8NCF5 419 aa27.61■■■□□ 2.01
CCDC12-207ENST00000494655 PRKRIP1Q9H875 184 aaPredicted RBP27.61■■■□□ 2.01
CCDC12-207ENST00000494655 SLC52A2Q9HAB3 445 aa27.61■■■□□ 2.01
CCDC12-207ENST00000494655 SPON1Q9HCB6 807 aa27.61■■■□□ 2.01
CCDC12-207ENST00000494655 ATP6V1AP38606 617 aa27.59■■■□□ 2.01
CCDC12-207ENST00000494655 MAPK8IP3Q9UPT6 1336 aa27.59■■■□□ 2.01
CCDC12-207ENST00000494655 AK7Q96M32 723 aa27.58■■■□□ 2.01
CCDC12-207ENST00000494655 RBM42Q9BTD8 480 aaKnown RBP27.58■■■□□ 2.01
CCDC12-207ENST00000494655 TEFQ10587 303 aa27.57■■■□□ 2
CCDC12-207ENST00000494655 RTF1Q92541 710 aaKnown RBP27.57■■■□□ 2
CCDC12-207ENST00000494655 PHACTR3Q96KR7 559 aa27.57■■■□□ 2
CCDC12-207ENST00000494655 LGR6Q9HBX8 967 aa27.57■■■□□ 2
CCDC12-207ENST00000494655 ZBTB7AO95365 584 aa27.54■■■□□ 2
CCDC12-207ENST00000494655 COL5A3P25940 1745 aaPredicted RBP27.54■■■□□ 2
CCDC12-207ENST00000494655 WDR43Q15061 677 aaKnown RBP eCLIP27.54■■■□□ 2
CCDC12-207ENST00000494655 CICQ96RK0 1608 aaPredicted RBP27.54■■■□□ 2
CCDC12-207ENST00000494655 MTFR1LQ9H019 292 aa27.54■■■□□ 2
CCDC12-207ENST00000494655 PPP1R1BQ9UD71 204 aaPredicted RBP27.54■■■□□ 2
CCDC12-207ENST00000494655 SIPA1L3O60292 1781 aaPredicted RBP27.53■■■□□ 2
CCDC12-207ENST00000494655 PNPLA7Q6ZV29 1317 aa27.53■■■□□ 2
CCDC12-207ENST00000494655 MSH5O43196 834 aa27.53■■■□□ 2
CCDC12-207ENST00000494655 FLAD1Q8NFF5 587 aa27.53■■■□□ 2
CCDC12-207ENST00000494655 PTCD1O75127 700 aaKnown RBP27.52■■■□□ 2
CCDC12-207ENST00000494655 PDGFDQ9GZP0 370 aaPredicted RBP27.52■■■□□ 2
CCDC12-207ENST00000494655 UBR3Q6ZT12 1888 aa27.52■■■□□ 2
CCDC12-207ENST00000494655 TTC5Q8N0Z6 440 aa27.51■■□□□ 1.99
CCDC12-207ENST00000494655 SLC16A10Q8TF71 515 aa27.51■■□□□ 1.99
CCDC12-207ENST00000494655 DLG5Q8TDM6 1919 aa27.5■■□□□ 1.99
CCDC12-207ENST00000494655 LINC00116Q8NCU8 138 aa27.5■■□□□ 1.99
CCDC12-207ENST00000494655 UBR2Q8IWV8 1755 aa27.5■■□□□ 1.99
CCDC12-207ENST00000494655 TJP1Q07157 1748 aa27.5■■□□□ 1.99
CCDC12-207ENST00000494655 ITPK1Q13572 414 aa27.49■■□□□ 1.99
CCDC12-207ENST00000494655 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
CCDC12-207ENST00000494655 HTATSF1O43719 755 aaKnown RBP27.48■■□□□ 1.99
CCDC12-207ENST00000494655 ANP32CO43423 234 aa27.47■■□□□ 1.99
CCDC12-207ENST00000494655 IL17REQ8NFR9 667 aa27.47■■□□□ 1.99
CCDC12-207ENST00000494655 ATF5Q9Y2D1 282 aaPredicted RBP27.47■■□□□ 1.99
CCDC12-207ENST00000494655 SRCAPQ6ZRS2 3230 aa27.46■■□□□ 1.99
CCDC12-207ENST00000494655 GNPATO15228 680 aa27.46■■□□□ 1.99
CCDC12-207ENST00000494655 KCPQ6ZWJ8 1503 aa27.46■■□□□ 1.99
CCDC12-207ENST00000494655 SSFA2P28290 1259 aa27.45■■□□□ 1.98
CCDC12-207ENST00000494655 PLEKHF1Q96S99 279 aa27.45■■□□□ 1.98
CCDC12-207ENST00000494655 CNTNAP4Q9C0A0 1308 aa27.44■■□□□ 1.98
CCDC12-207ENST00000494655 PHF14O94880 888 aa27.44■■□□□ 1.98
CCDC12-207ENST00000494655 SLC39A6Q13433 755 aa27.44■■□□□ 1.98
CCDC12-207ENST00000494655 NFE2L2Q16236 605 aa27.44■■□□□ 1.98
CCDC12-207ENST00000494655 POLD1P28340 1107 aa27.43■■□□□ 1.98
CCDC12-207ENST00000494655 MCM10Q7L590 875 aa27.43■■□□□ 1.98
CCDC12-207ENST00000494655 SLC4A9Q96Q91 983 aa27.43■■□□□ 1.98
CCDC12-207ENST00000494655 COL23A1Q86Y22 540 aaPredicted RBP27.42■■□□□ 1.98
CCDC12-207ENST00000494655 RTCBQ9Y3I0 505 aaKnown RBP27.42■■□□□ 1.98
CCDC12-207ENST00000494655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.41■■□□□ 1.98
CCDC12-207ENST00000494655 BTBD11A6QL63 1104 aa27.41■■□□□ 1.98
CCDC12-207ENST00000494655 COL24A1Q17RW2 1714 aa27.41■■□□□ 1.98
CCDC12-207ENST00000494655 RC3H1Q5TC82 1133 aaKnown RBP27.4■■□□□ 1.98
CCDC12-207ENST00000494655 ZNF790Q6PG37 636 aa27.4■■□□□ 1.98
CCDC12-207ENST00000494655 VSIG10Q8N0Z9 540 aa27.4■■□□□ 1.98
CCDC12-207ENST00000494655 LMOD3Q0VAK6 560 aa27.39■■□□□ 1.98
CCDC12-207ENST00000494655 PTGER2P43116 358 aa27.38■■□□□ 1.97
CCDC12-207ENST00000494655 ADRA2BP18089 450 aa27.37■■□□□ 1.97
CCDC12-207ENST00000494655 CRKLP46109 303 aaKnown RBP27.37■■□□□ 1.97
CCDC12-207ENST00000494655 DCTN1Q14203 1278 aa27.37■■□□□ 1.97
CCDC12-207ENST00000494655 FMNL2Q96PY5 1086 aa27.37■■□□□ 1.97
CCDC12-207ENST00000494655 DNAJC10Q8IXB1 793 aa27.36■■□□□ 1.97
CCDC12-207ENST00000494655 RUNDC1Q96C34 613 aa27.36■■□□□ 1.97
CCDC12-207ENST00000494655 TRAPPC3LQ5T215 181 aa27.35■■□□□ 1.97
CCDC12-207ENST00000494655 CCDC146Q8IYE0 955 aa27.35■■□□□ 1.97
CCDC12-207ENST00000494655 ARXQ96QS3 562 aa27.35■■□□□ 1.97
CCDC12-207ENST00000494655 C4AP0C0L4 1744 aa27.35■■□□□ 1.97
CCDC12-207ENST00000494655 MYH14Q7Z406 1995 aaKnown RBP27.35■■□□□ 1.97
CCDC12-207ENST00000494655 HEG1Q9ULI3 1381 aa27.35■■□□□ 1.97
CCDC12-207ENST00000494655 RPS6KA4O75676 772 aa27.34■■□□□ 1.97
CCDC12-207ENST00000494655 CCDC87Q9NVE4 849 aa27.34■■□□□ 1.97
CCDC12-207ENST00000494655 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
CCDC12-207ENST00000494655 STARD3NLO95772 234 aa27.33■■□□□ 1.97
CCDC12-207ENST00000494655 RIPK4P57078 832 aa27.33■■□□□ 1.97
CCDC12-207ENST00000494655 PNISRQ8TF01 805 aaKnown RBP27.33■■□□□ 1.97
CCDC12-207ENST00000494655 ZNF496Q96IT1 587 aaPredicted RBP27.33■■□□□ 1.97
CCDC12-207ENST00000494655 SGIP1Q9BQI5 828 aa27.33■■□□□ 1.97
CCDC12-207ENST00000494655 TEX13AQ9BXU3 409 aaPredicted RBP27.33■■□□□ 1.97
CCDC12-207ENST00000494655 TAF7Q15545 349 aaPredicted RBP27.32■■□□□ 1.96
CCDC12-207ENST00000494655 MSL1Q68DK7 614 aa27.32■■□□□ 1.96
CCDC12-207ENST00000494655 KDM3BQ7LBC6 1761 aa27.32■■□□□ 1.96
CCDC12-207ENST00000494655 RFC4P35249 363 aa27.31■■□□□ 1.96
CCDC12-207ENST00000494655 TMPOP42166 694 aaKnown RBP27.31■■□□□ 1.96
CCDC12-207ENST00000494655 AMIGO3Q86WK7 504 aa27.31■■□□□ 1.96
CCDC12-207ENST00000494655 CYP19A1P11511 503 aaPredicted RBP27.29■■□□□ 1.96
CCDC12-207ENST00000494655 MRS2Q9HD23 443 aa27.29■■□□□ 1.96
CCDC12-207ENST00000494655 SMIM5Q71RC9 77 aa27.28■■□□□ 1.96
CCDC12-207ENST00000494655 KLHL34Q8N239 644 aa27.28■■□□□ 1.96
CCDC12-207ENST00000494655 NEUROD2Q15784 382 aa27.27■■□□□ 1.96
CCDC12-207ENST00000494655 LAMB4A4D0S4 1761 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms