RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 CEP85Q6P2H3 762 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 CHMP4CQ96CF2 233 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 BOLA2Q9H3K6 86 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 ST18O60284 1047 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 GLIPR1L2Q4G1C9 344 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 ALKQ9UM73 1620 aa11.36□□□□□ -0.59
MINDY4-203ENST00000494187 HDAC1Q13547 482 aaPredicted RBP11.35□□□□□ -0.59
MINDY4-203ENST00000494187 AACSQ86V21 672 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 CHMP5Q9NZZ3 219 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 ARAP3Q8WWN8 1544 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 USP19O94966 1318 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
MINDY4-203ENST00000494187 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 DNAAF4Q8WXU2 420 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
MINDY4-203ENST00000494187 QRICH2Q9H0J4 1663 aa11.35□□□□□ -0.59
MINDY4-203ENST00000494187 GPTP24298 496 aa11.34□□□□□ -0.59
MINDY4-203ENST00000494187 AXIN2Q9Y2T1 843 aa11.34□□□□□ -0.59
MINDY4-203ENST00000494187 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
MINDY4-203ENST00000494187 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
MINDY4-203ENST00000494187 REC8O95072 547 aa11.34□□□□□ -0.59
MINDY4-203ENST00000494187 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
MINDY4-203ENST00000494187 UBE3BQ7Z3V4 1068 aa11.34□□□□□ -0.59
MINDY4-203ENST00000494187 DDX58O95786 925 aaKnown RBP11.33□□□□□ -0.6
MINDY4-203ENST00000494187 STK3Q13188 491 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 PLEKHM2Q8IWE5 1019 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 CPA1P15085 419 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 MX1P20591 662 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 MROH1Q8NDA8 1641 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
MINDY4-203ENST00000494187 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
MINDY4-203ENST00000494187 TRAK2O60296 914 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 SSFA2P28290 1259 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 RNF214Q8ND24 703 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 XAGE3Q8WTP9 111 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 FSD1Q9BTV5 496 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 PTPRMP28827 1452 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 NEXMIFQ5QGS0 1516 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 GOLGA6L3A6NEY3 463 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 VSIG10Q8N0Z9 540 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 ANKRD44Q8N8A2 993 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 CAMSAP1Q5T5Y3 1602 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 IP6K1Q92551 441 aa11.32□□□□□ -0.6
MINDY4-203ENST00000494187 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
MINDY4-203ENST00000494187 CLTCQ00610 1675 aaKnown RBP11.32□□□□□ -0.6
MINDY4-203ENST00000494187 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
MINDY4-203ENST00000494187 TOMM22Q9NS69 142 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 ADGRB1O14514 1584 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
MINDY4-203ENST00000494187 ARID3AQ99856 593 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 C19orf44Q9H6X5 657 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 SNRKQ9NRH2 765 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 CPS1P31327 1500 aa11.31□□□□□ -0.6
MINDY4-203ENST00000494187 PRPF40AO75400 957 aaKnown RBP11.31□□□□□ -0.6
MINDY4-203ENST00000494187 ARHGAP31Q2M1Z3 1444 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 ERC2O15083 957 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 CD2BP2O95400 341 aaKnown RBP11.3□□□□□ -0.6
MINDY4-203ENST00000494187 GSPT1P15170 499 aaKnown RBP11.3□□□□□ -0.6
MINDY4-203ENST00000494187 ACSBG1Q96GR2 724 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 PTMAP06454 111 aaKnown RBP11.3□□□□□ -0.6
MINDY4-203ENST00000494187 PDE1AP54750 535 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 TTC22Q5TAA0 569 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 GPATCH3Q96I76 525 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 ZFYVE9O95405 1425 aa11.3□□□□□ -0.6
MINDY4-203ENST00000494187 A0A087WZG4 1122 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 DCTPP1Q9H773 170 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 USP16Q9Y5T5 823 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 CAVIN1Q6NZI2 390 aaKnown RBP11.29□□□□□ -0.6
MINDY4-203ENST00000494187 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 FBXW7Q969H0 707 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 EDC3Q96F86 508 aaKnown RBP11.29□□□□□ -0.6
MINDY4-203ENST00000494187 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
MINDY4-203ENST00000494187 USP6P35125 1406 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
MINDY4-203ENST00000494187 ZGPATQ8N5A5 531 aaKnown RBP11.29□□□□□ -0.6
MINDY4-203ENST00000494187 IQGAP1P46940 1657 aa11.29□□□□□ -0.6
MINDY4-203ENST00000494187 MCM4P33991 863 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 FKBP4Q02790 459 aaKnown RBP eCLIP11.28□□□□□ -0.6
MINDY4-203ENST00000494187 ARHGAP45Q92619 1136 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 A1BGP04217 495 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 ZNF496Q96IT1 587 aaPredicted RBP11.28□□□□□ -0.6
MINDY4-203ENST00000494187 CFAP74Q9C0B2 1584 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
MINDY4-203ENST00000494187 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 APPP05067 770 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 FERMT3Q86UX7 667 aa11.28□□□□□ -0.6
MINDY4-203ENST00000494187 ARHGEF40Q8TER5 1519 aa11.27□□□□□ -0.6
MINDY4-203ENST00000494187 RNMTO43148 476 aaKnown RBP11.27□□□□□ -0.6
MINDY4-203ENST00000494187 CEBPZQ03701 1054 aaKnown RBP11.27□□□□□ -0.6
MINDY4-203ENST00000494187 WASHC4Q2M389 1173 aa11.27□□□□□ -0.6
MINDY4-203ENST00000494187 RHPN1Q8TCX5 695 aa11.27□□□□□ -0.6
MINDY4-203ENST00000494187 USP44Q9H0E7 712 aa11.27□□□□□ -0.6
MINDY4-203ENST00000494187 MAP3K5Q99683 1374 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms