RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 TTC21BQ7Z4L5 1316 aa8.26□□□□□ -1.09
SF3A3-208ENST00000489537 EP400Q96L91 3159 aa8.25□□□□□ -1.09
SF3A3-208ENST00000489537 APAF1O14727 1248 aa8.25□□□□□ -1.09
SF3A3-208ENST00000489537 FOXO3O43524 673 aa8.25□□□□□ -1.09
SF3A3-208ENST00000489537 RRP1P56182 461 aaKnown RBP8.25□□□□□ -1.09
SF3A3-208ENST00000489537 MAP3K9P80192 1104 aa8.25□□□□□ -1.09
SF3A3-208ENST00000489537 TRMT2AQ8IZ69 625 aaKnown RBP8.25□□□□□ -1.09
SF3A3-208ENST00000489537 NGDNQ8NEJ9 315 aaKnown RBP8.25□□□□□ -1.09
SF3A3-208ENST00000489537 LRRC59Q96AG4 307 aaKnown RBP8.25□□□□□ -1.09
SF3A3-208ENST00000489537 RGS12O14924 1447 aa8.25□□□□□ -1.09
SF3A3-208ENST00000489537 CDK12Q9NYV4 1490 aaPredicted RBP8.25□□□□□ -1.09
SF3A3-208ENST00000489537 RGPD8O14715 1765 aaPredicted RBP8.25□□□□□ -1.09
SF3A3-208ENST00000489537 ITSN1Q15811 1721 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 USP6P35125 1406 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 TNNT2P45379 298 aaPredicted RBP8.24□□□□□ -1.09
SF3A3-208ENST00000489537 ESCO1Q5FWF5 840 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.24□□□□□ -1.09
SF3A3-208ENST00000489537 WWC1Q8IX03 1113 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 TCP11L2Q8N4U5 519 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 KCNK17Q96T54 332 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 ACEP12821 1306 aa8.24□□□□□ -1.09
SF3A3-208ENST00000489537 USP31Q70CQ4 1352 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 RXRBP28702 533 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 PSEN2P49810 448 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 MFSD10Q14728 455 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 ZNF772Q68DY9 489 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-208ENST00000489537 BBXQ8WY36 941 aaPredicted RBP8.23□□□□□ -1.09
SF3A3-208ENST00000489537 CHMP4BQ9H444 224 aaKnown RBP8.23□□□□□ -1.09
SF3A3-208ENST00000489537 QTRT2Q9H974 415 aaKnown RBP8.23□□□□□ -1.09
SF3A3-208ENST00000489537 POLKQ9UBT6 870 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 KIF20BQ96Q89 1820 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 FMN2Q9NZ56 1722 aa8.23□□□□□ -1.09
SF3A3-208ENST00000489537 COL22A1Q8NFW1 1626 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-208ENST00000489537 U2SURPO15042 1029 aaKnown RBP8.22□□□□□ -1.09
SF3A3-208ENST00000489537 EVI5O60447 810 aa8.22□□□□□ -1.09
SF3A3-208ENST00000489537 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
SF3A3-208ENST00000489537 CCDC136Q96JN2 1154 aa8.22□□□□□ -1.09
SF3A3-208ENST00000489537 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.22□□□□□ -1.09
SF3A3-208ENST00000489537 MON2Q7Z3U7 1717 aa8.22□□□□□ -1.09
SF3A3-208ENST00000489537 PRR36Q9H6K5 1346 aa8.22□□□□□ -1.09
SF3A3-208ENST00000489537 PDE3AQ14432 1141 aa8.21□□□□□ -1.1
SF3A3-208ENST00000489537 CCDC146Q8IYE0 955 aa8.21□□□□□ -1.1
SF3A3-208ENST00000489537 FNBP4Q8N3X1 1017 aaPredicted RBP8.21□□□□□ -1.1
SF3A3-208ENST00000489537 KCNH5Q8NCM2 988 aa8.21□□□□□ -1.1
SF3A3-208ENST00000489537 NGLY1Q96IV0 654 aa8.21□□□□□ -1.1
SF3A3-208ENST00000489537 CHMP4AQ9BY43 222 aa8.21□□□□□ -1.1
SF3A3-208ENST00000489537 SALL2Q9Y467 1007 aaPredicted RBP8.21□□□□□ -1.1
SF3A3-208ENST00000489537 TOPAZ1Q8N9V7 1692 aa8.21□□□□□ -1.1
SF3A3-208ENST00000489537 ATRNO75882 1429 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 COL3A1P02461 1466 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-208ENST00000489537 AKAP12Q02952 1782 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 PTPREP23469 700 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 SPATA31A3Q5VYP0 1347 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 RTL1A6NKG5 1358 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 SSH2Q76I76 1423 aa8.2□□□□□ -1.1
SF3A3-208ENST00000489537 PPM1GO15355 546 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-208ENST00000489537 TMPOP42166 694 aaKnown RBP8.19□□□□□ -1.1
SF3A3-208ENST00000489537 FOSBP53539 338 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 RBM6P78332 1123 aaKnown RBP8.19□□□□□ -1.1
SF3A3-208ENST00000489537 NME9Q86XW9 330 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 CDCA7LQ96GN5 454 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 PLEKHF1Q96S99 279 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 USP21Q9UK80 565 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 SBNO1A3KN83 1393 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 FLT4P35916 1363 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 OVOS2A0A0J9YW53 1432 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 OVOS2Q6IE36 1432 aa8.19□□□□□ -1.1
SF3A3-208ENST00000489537 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
SF3A3-208ENST00000489537 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
SF3A3-208ENST00000489537 IL13P35225 146 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 RIPK4P57078 832 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 GNAI1P63096 354 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 PSME1Q06323 249 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 KRT28Q7Z3Y7 464 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 PMFBP1Q8TBY8 1022 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-208ENST00000489537 NPHP3Q7Z494 1330 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 GLI3P10071 1580 aa8.18□□□□□ -1.1
SF3A3-208ENST00000489537 HTATSF1O43719 755 aaKnown RBP8.17□□□□□ -1.1
SF3A3-208ENST00000489537 AMPHP49418 695 aa8.17□□□□□ -1.1
SF3A3-208ENST00000489537 RSPH6AQ9H0K4 717 aa8.17□□□□□ -1.1
SF3A3-208ENST00000489537 ARHGEF10O15013 1369 aa8.17□□□□□ -1.1
SF3A3-208ENST00000489537 SLIT2O94813 1529 aa8.17□□□□□ -1.1
SF3A3-208ENST00000489537 MARF1Q9Y4F3 1742 aaKnown RBP8.17□□□□□ -1.1
SF3A3-208ENST00000489537 HRO43593 1189 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 PRKAR2BP31323 418 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
SF3A3-208ENST00000489537 NEUROD2Q15784 382 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 ALDH1L2Q3SY69 923 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 SPRYD3Q8NCJ5 442 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 KIF16BQ96L93 1317 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 PLEKHG2Q9H7P9 1386 aa8.16□□□□□ -1.1
SF3A3-208ENST00000489537 TRPM3Q9HCF6 1732 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms