RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 VAMP4O75379 141 aa26.91■■□□□ 1.9
SND1-214ENST00000489417 IRX6P78412 446 aaPredicted RBP26.91■■□□□ 1.9
SND1-214ENST00000489417 KDM3BQ7LBC6 1761 aa26.91■■□□□ 1.9
SND1-214ENST00000489417 EXOC5O00471 708 aa26.9■■□□□ 1.9
SND1-214ENST00000489417 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.9■■□□□ 1.9
SND1-214ENST00000489417 SLC52A2Q9HAB3 445 aa26.9■■□□□ 1.9
SND1-214ENST00000489417 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
SND1-214ENST00000489417 ELL2O00472 640 aaPredicted RBP26.89■■□□□ 1.89
SND1-214ENST00000489417 KRT24Q2M2I5 525 aa26.89■■□□□ 1.89
SND1-214ENST00000489417 ALDH1L2Q3SY69 923 aa26.88■■□□□ 1.89
SND1-214ENST00000489417 PLIN1O60240 522 aa26.87■■□□□ 1.89
SND1-214ENST00000489417 BCL2L13Q9BXK5 485 aa26.87■■□□□ 1.89
SND1-214ENST00000489417 DDB1Q16531 1140 aa26.86■■□□□ 1.89
SND1-214ENST00000489417 SSH1Q8WYL5 1049 aa26.86■■□□□ 1.89
SND1-214ENST00000489417 SMC4Q9NTJ3 1288 aa26.86■■□□□ 1.89
SND1-214ENST00000489417 ERVV-2B6SEH9 535 aa26.85■■□□□ 1.89
SND1-214ENST00000489417 CABP4P57796 275 aa26.85■■□□□ 1.89
SND1-214ENST00000489417 ATRNO75882 1429 aa26.84■■□□□ 1.89
SND1-214ENST00000489417 NFATC2IPQ8NCF5 419 aa26.84■■□□□ 1.89
SND1-214ENST00000489417 SOS1Q07889 1333 aaPredicted RBP26.84■■□□□ 1.89
SND1-214ENST00000489417 KCNQ3O43525 872 aa26.83■■□□□ 1.89
SND1-214ENST00000489417 EIF4A1P60842 406 aaKnown RBP26.83■■□□□ 1.89
SND1-214ENST00000489417 FAM98CQ17RN3 349 aaKnown RBP26.83■■□□□ 1.89
SND1-214ENST00000489417 TOGARAM1Q9Y4F4 1720 aa26.82■■□□□ 1.88
SND1-214ENST00000489417 CANXP27824 592 aaKnown RBP26.82■■□□□ 1.88
SND1-214ENST00000489417 TRPC5Q9UL62 973 aaPredicted RBP26.82■■□□□ 1.88
SND1-214ENST00000489417 GLI3P10071 1580 aa26.81■■□□□ 1.88
SND1-214ENST00000489417 ERICH6BQ5W0A0 696 aa26.8■■□□□ 1.88
SND1-214ENST00000489417 FRAT1Q92837 279 aaPredicted RBP26.8■■□□□ 1.88
SND1-214ENST00000489417 BRPF1P55201 1214 aaPredicted RBP26.79■■□□□ 1.88
SND1-214ENST00000489417 MRPL50Q8N5N7 158 aaKnown RBP26.79■■□□□ 1.88
SND1-214ENST00000489417 GJD4Q96KN9 370 aaPredicted RBP26.79■■□□□ 1.88
SND1-214ENST00000489417 THSD7AQ9UPZ6 1657 aa26.78■■□□□ 1.88
SND1-214ENST00000489417 ZNF790Q6PG37 636 aa26.78■■□□□ 1.88
SND1-214ENST00000489417 KIF16BQ96L93 1317 aa26.78■■□□□ 1.88
SND1-214ENST00000489417 HOXB7P09629 217 aa26.77■■□□□ 1.88
SND1-214ENST00000489417 SLC39A6Q13433 755 aa26.77■■□□□ 1.88
SND1-214ENST00000489417 TCERG1O14776 1098 aaKnown RBP26.76■■□□□ 1.87
SND1-214ENST00000489417 HEG1Q9ULI3 1381 aa26.76■■□□□ 1.87
SND1-214ENST00000489417 C20orf194Q5TEA3 1177 aa26.75■■□□□ 1.87
SND1-214ENST00000489417 ZKSCAN2Q63HK3 967 aa26.75■■□□□ 1.87
SND1-214ENST00000489417 MARCH10Q8NA82 808 aaPredicted RBP26.75■■□□□ 1.87
SND1-214ENST00000489417 TTC5Q8N0Z6 440 aa26.74■■□□□ 1.87
SND1-214ENST00000489417 TMOD3Q9NYL9 352 aa26.74■■□□□ 1.87
SND1-214ENST00000489417 PAPPAQ13219 1627 aa26.74■■□□□ 1.87
SND1-214ENST00000489417 A0A0G2JS52 829 aa26.73■■□□□ 1.87
SND1-214ENST00000489417 MYT1Q01538 1121 aa26.73■■□□□ 1.87
SND1-214ENST00000489417 PDE3AQ14432 1141 aa26.73■■□□□ 1.87
SND1-214ENST00000489417 QTRT2Q9H974 415 aaKnown RBP26.73■■□□□ 1.87
SND1-214ENST00000489417 NOB1Q9ULX3 412 aaKnown RBP26.73■■□□□ 1.87
SND1-214ENST00000489417 IPO8O15397 1037 aaKnown RBP26.72■■□□□ 1.87
SND1-214ENST00000489417 CCDC30Q5VVM6 783 aa26.72■■□□□ 1.87
SND1-214ENST00000489417 DOT1LQ8TEK3 1739 aa26.71■■□□□ 1.87
SND1-214ENST00000489417 GIGYF1O75420 1035 aaPredicted RBP26.71■■□□□ 1.87
SND1-214ENST00000489417 HDGFL1Q5TGJ6 251 aa26.71■■□□□ 1.87
SND1-214ENST00000489417 CRBNQ96SW2 442 aa26.71■■□□□ 1.87
SND1-214ENST00000489417 CHMP4AQ9BY43 222 aa26.71■■□□□ 1.87
SND1-214ENST00000489417 MS4A1P11836 297 aa26.7■■□□□ 1.86
SND1-214ENST00000489417 STK31Q9BXU1 1019 aa26.7■■□□□ 1.86
SND1-214ENST00000489417 ITGB4P16144 1822 aa26.7■■□□□ 1.86
SND1-214ENST00000489417 ATF7IPQ6VMQ6 1270 aa26.69■■□□□ 1.86
SND1-214ENST00000489417 EXOC6Q8TAG9 804 aa26.69■■□□□ 1.86
SND1-214ENST00000489417 ZNF496Q96IT1 587 aaPredicted RBP26.69■■□□□ 1.86
SND1-214ENST00000489417 FMNL2Q96PY5 1086 aa26.69■■□□□ 1.86
SND1-214ENST00000489417 ONECUT3O60422 494 aaPredicted RBP26.68■■□□□ 1.86
SND1-214ENST00000489417 PIGBQ92521 554 aa26.68■■□□□ 1.86
SND1-214ENST00000489417 ARHGAP45Q92619 1136 aa26.68■■□□□ 1.86
SND1-214ENST00000489417 TNNQ9UQP3 1299 aa26.68■■□□□ 1.86
SND1-214ENST00000489417 UBR2Q8IWV8 1755 aa26.68■■□□□ 1.86
SND1-214ENST00000489417 BCL9O00512 1426 aa26.67■■□□□ 1.86
SND1-214ENST00000489417 TRIM27P14373 513 aa26.67■■□□□ 1.86
SND1-214ENST00000489417 ZNF772Q68DY9 489 aaPredicted RBP26.67■■□□□ 1.86
SND1-214ENST00000489417 PANK1Q8TE04 598 aa26.67■■□□□ 1.86
SND1-214ENST00000489417 NECTIN2Q92692 538 aa26.67■■□□□ 1.86
SND1-214ENST00000489417 SLC4A2P04920 1241 aa26.66■■□□□ 1.86
SND1-214ENST00000489417 KCPQ6ZWJ8 1503 aa26.66■■□□□ 1.86
SND1-214ENST00000489417 EIF2S2P20042 333 aaKnown RBP26.65■■□□□ 1.86
SND1-214ENST00000489417 DZIP1LQ8IYY4 767 aaKnown RBP26.65■■□□□ 1.86
SND1-214ENST00000489417 C5P01031 1676 aa26.65■■□□□ 1.86
SND1-214ENST00000489417 SNRPA1P09661 255 aaKnown RBP26.65■■□□□ 1.86
SND1-214ENST00000489417 PRIM1P49642 420 aaKnown RBP26.65■■□□□ 1.86
SND1-214ENST00000489417 FTSJ3Q8IY81 847 aaKnown RBP26.65■■□□□ 1.86
SND1-214ENST00000489417 CLUAP1Q96AJ1 413 aa26.65■■□□□ 1.86
SND1-214ENST00000489417 PRAMEF22A3QJZ6 481 aa26.64■■□□□ 1.85
SND1-214ENST00000489417 RLBP1P12271 317 aa26.64■■□□□ 1.85
SND1-214ENST00000489417 SYTL4Q96C24 671 aaPredicted RBP26.64■■□□□ 1.85
SND1-214ENST00000489417 API5Q9BZZ5 524 aaKnown RBP26.64■■□□□ 1.85
SND1-214ENST00000489417 PPP4R2Q9NY27 417 aa26.64■■□□□ 1.85
SND1-214ENST00000489417 SEPT12Q8IYM1 358 aa26.63■■□□□ 1.85
SND1-214ENST00000489417 PTPRCP08575 1304 aa26.62■■□□□ 1.85
SND1-214ENST00000489417 ACSBG1Q96GR2 724 aa26.62■■□□□ 1.85
SND1-214ENST00000489417 ATG3Q9NT62 314 aa26.62■■□□□ 1.85
SND1-214ENST00000489417 ASAP1Q9ULH1 1129 aa26.61■■□□□ 1.85
SND1-214ENST00000489417 COG6Q9Y2V7 657 aa26.61■■□□□ 1.85
SND1-214ENST00000489417 LAMB4A4D0S4 1761 aa26.6■■□□□ 1.85
SND1-214ENST00000489417 G2E3Q7L622 706 aa26.6■■□□□ 1.85
SND1-214ENST00000489417 CHPF2Q9P2E5 772 aa26.6■■□□□ 1.85
SND1-214ENST00000489417 PTCD1O75127 700 aaKnown RBP26.58■■□□□ 1.85
SND1-214ENST00000489417 DBF4Q9UBU7 674 aaPredicted RBP26.58■■□□□ 1.85
SND1-214ENST00000489417 CACNA1FO60840 1977 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms