RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 THUMPD2Q9BTF0 503 aaKnown RBP20.51■□□□□ 0.87
TM2D1-208ENST00000488206 WWC1Q8IX03 1113 aa20.5■□□□□ 0.87
TM2D1-208ENST00000488206 RGPD3A6NKT7 1758 aaPredicted RBP20.49■□□□□ 0.87
TM2D1-208ENST00000488206 RGPD4Q7Z3J3 1758 aa20.49■□□□□ 0.87
TM2D1-208ENST00000488206 KAT6BQ8WYB5 2073 aa20.49■□□□□ 0.87
TM2D1-208ENST00000488206 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
TM2D1-208ENST00000488206 NFATC2IPQ8NCF5 419 aa20.49■□□□□ 0.87
TM2D1-208ENST00000488206 PIGBQ92521 554 aa20.49■□□□□ 0.87
TM2D1-208ENST00000488206 SALL2Q9Y467 1007 aaPredicted RBP20.49■□□□□ 0.87
TM2D1-208ENST00000488206 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
TM2D1-208ENST00000488206 SF3B2Q13435 895 aaKnown RBP20.46■□□□□ 0.87
TM2D1-208ENST00000488206 TAF7Q15545 349 aaPredicted RBP20.46■□□□□ 0.87
TM2D1-208ENST00000488206 PTF1AQ7RTS3 328 aa20.46■□□□□ 0.87
TM2D1-208ENST00000488206 CCDC125Q86Z20 511 aa20.46■□□□□ 0.87
TM2D1-208ENST00000488206 IL16Q14005 1332 aa20.46■□□□□ 0.87
TM2D1-208ENST00000488206 ZNF521Q96K83 1311 aa20.46■□□□□ 0.87
TM2D1-208ENST00000488206 UBR2Q8IWV8 1755 aa20.45■□□□□ 0.86
TM2D1-208ENST00000488206 BTBD11A6QL63 1104 aa20.45■□□□□ 0.86
TM2D1-208ENST00000488206 WDR63Q8IWG1 891 aa20.45■□□□□ 0.86
TM2D1-208ENST00000488206 SMARCC1Q92922 1105 aaPredicted RBP20.45■□□□□ 0.86
TM2D1-208ENST00000488206 IFT57Q9NWB7 429 aa20.45■□□□□ 0.86
TM2D1-208ENST00000488206 BABAM1Q9NWV8 329 aa20.45■□□□□ 0.86
TM2D1-208ENST00000488206 PALLDQ8WX93 1383 aa20.45■□□□□ 0.86
TM2D1-208ENST00000488206 GNAI1P63096 354 aa20.43■□□□□ 0.86
TM2D1-208ENST00000488206 TTC5Q8N0Z6 440 aa20.43■□□□□ 0.86
TM2D1-208ENST00000488206 LY75O60449 1722 aa20.43■□□□□ 0.86
TM2D1-208ENST00000488206 KCPQ6ZWJ8 1503 aa20.43■□□□□ 0.86
TM2D1-208ENST00000488206 APBA3O96018 575 aa20.42■□□□□ 0.86
TM2D1-208ENST00000488206 CFAP44Q96MT7 982 aa20.42■□□□□ 0.86
TM2D1-208ENST00000488206 ATG3Q9NT62 314 aa20.42■□□□□ 0.86
TM2D1-208ENST00000488206 TSPYL4Q9UJ04 414 aa20.42■□□□□ 0.86
TM2D1-208ENST00000488206 ASAP1Q9ULH1 1129 aa20.42■□□□□ 0.86
TM2D1-208ENST00000488206 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
TM2D1-208ENST00000488206 BAG6P46379 1132 aa20.41■□□□□ 0.86
TM2D1-208ENST00000488206 ZNF790Q6PG37 636 aa20.41■□□□□ 0.86
TM2D1-208ENST00000488206 UPF1Q92900 1129 aaKnown RBP eCLIP20.41■□□□□ 0.86
TM2D1-208ENST00000488206 LAS1LQ9Y4W2 734 aaKnown RBP20.41■□□□□ 0.86
TM2D1-208ENST00000488206 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
TM2D1-208ENST00000488206 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
TM2D1-208ENST00000488206 SLC39A6Q13433 755 aa20.4■□□□□ 0.86
TM2D1-208ENST00000488206 ZNF831Q5JPB2 1677 aa20.4■□□□□ 0.86
TM2D1-208ENST00000488206 CHL1O00533 1208 aa20.39■□□□□ 0.85
TM2D1-208ENST00000488206 PLSCR1O15162 318 aa20.39■□□□□ 0.85
TM2D1-208ENST00000488206 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
TM2D1-208ENST00000488206 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
TM2D1-208ENST00000488206 RREB1Q92766 1687 aa20.38■□□□□ 0.85
TM2D1-208ENST00000488206 FMNL2Q96PY5 1086 aa20.37■□□□□ 0.85
TM2D1-208ENST00000488206 MYH16Q9H6N6 1097 aa20.37■□□□□ 0.85
TM2D1-208ENST00000488206 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
TM2D1-208ENST00000488206 E9PSI1 815 aa20.36■□□□□ 0.85
TM2D1-208ENST00000488206 TJP1Q07157 1748 aa20.36■□□□□ 0.85
TM2D1-208ENST00000488206 HEG1Q9ULI3 1381 aa20.35■□□□□ 0.85
TM2D1-208ENST00000488206 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
TM2D1-208ENST00000488206 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
TM2D1-208ENST00000488206 KCNQ3O43525 872 aa20.35■□□□□ 0.85
TM2D1-208ENST00000488206 PTCD1O75127 700 aaKnown RBP20.35■□□□□ 0.85
TM2D1-208ENST00000488206 SIK1P57059 783 aa20.35■□□□□ 0.85
TM2D1-208ENST00000488206 SLC27A3Q5K4L6 730 aa20.35■□□□□ 0.85
TM2D1-208ENST00000488206 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
TM2D1-208ENST00000488206 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
TM2D1-208ENST00000488206 LAMB4A4D0S4 1761 aa20.34■□□□□ 0.85
TM2D1-208ENST00000488206 MSH5O43196 834 aa20.34■□□□□ 0.85
TM2D1-208ENST00000488206 EN1Q05925 392 aaPredicted RBP20.34■□□□□ 0.85
TM2D1-208ENST00000488206 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
TM2D1-208ENST00000488206 CCNL1Q9UK58 526 aaPredicted RBP20.34■□□□□ 0.85
TM2D1-208ENST00000488206 C5P01031 1676 aa20.34■□□□□ 0.85
TM2D1-208ENST00000488206 EIF4A1P60842 406 aaKnown RBP20.33■□□□□ 0.85
TM2D1-208ENST00000488206 TXNRD1Q16881 649 aa20.33■□□□□ 0.85
TM2D1-208ENST00000488206 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
TM2D1-208ENST00000488206 YTHDC1Q96MU7 727 aaKnown RBP20.33■□□□□ 0.85
TM2D1-208ENST00000488206 CAMKK2Q96RR4 588 aa20.33■□□□□ 0.85
TM2D1-208ENST00000488206 COL5A3P25940 1745 aaPredicted RBP20.33■□□□□ 0.84
TM2D1-208ENST00000488206 HMGB2P26583 209 aaKnown RBP20.32■□□□□ 0.84
TM2D1-208ENST00000488206 DEFB132Q7Z7B7 95 aa20.32■□□□□ 0.84
TM2D1-208ENST00000488206 SPINK5Q9NQ38 1064 aaPredicted RBP20.32■□□□□ 0.84
TM2D1-208ENST00000488206 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
TM2D1-208ENST00000488206 ATP6V1AP38606 617 aa20.31■□□□□ 0.84
TM2D1-208ENST00000488206 SLFN5Q08AF3 891 aa20.31■□□□□ 0.84
TM2D1-208ENST00000488206 EZH2Q15910 746 aaKnown RBP20.31■□□□□ 0.84
TM2D1-208ENST00000488206 SNRPA1P09661 255 aaKnown RBP20.3■□□□□ 0.84
TM2D1-208ENST00000488206 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
TM2D1-208ENST00000488206 TAF1LQ8IZX4 1826 aa20.3■□□□□ 0.84
TM2D1-208ENST00000488206 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
TM2D1-208ENST00000488206 HOXB7P09629 217 aa20.28■□□□□ 0.84
TM2D1-208ENST00000488206 ITPK1Q13572 414 aa20.28■□□□□ 0.84
TM2D1-208ENST00000488206 TEX13AQ9BXU3 409 aaPredicted RBP20.28■□□□□ 0.84
TM2D1-208ENST00000488206 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
TM2D1-208ENST00000488206 C4BP0C0L5 1744 aa20.27■□□□□ 0.84
TM2D1-208ENST00000488206 GIGYF1O75420 1035 aaPredicted RBP20.27■□□□□ 0.84
TM2D1-208ENST00000488206 PROM2Q8N271 834 aa20.27■□□□□ 0.84
TM2D1-208ENST00000488206 LRRC4BQ9NT99 713 aa20.27■□□□□ 0.84
TM2D1-208ENST00000488206 DNAJC10Q8IXB1 793 aa20.26■□□□□ 0.83
TM2D1-208ENST00000488206 TRMT2AQ8IZ69 625 aaKnown RBP20.26■□□□□ 0.83
TM2D1-208ENST00000488206 SOCS7O14512 581 aa20.25■□□□□ 0.83
TM2D1-208ENST00000488206 STARD3NLO95772 234 aa20.25■□□□□ 0.83
TM2D1-208ENST00000488206 KCNQ4P56696 695 aa20.25■□□□□ 0.83
TM2D1-208ENST00000488206 KRT24Q2M2I5 525 aa20.25■□□□□ 0.83
TM2D1-208ENST00000488206 DUSP27Q5VZP5 1158 aa20.25■□□□□ 0.83
TM2D1-208ENST00000488206 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
TM2D1-208ENST00000488206 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms