RNA–Protein interactions for RNA: ENST00000486593.5

LAMP2-204, Transcript of lysosomal associated membrane protein 2, humanhuman

TSL 5

Gene LAMP2, Length 1,069 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-204ENST00000486593 APLP1P51693 650 aa11.49□□□□□ -0.57
LAMP2-204ENST00000486593 PROSER2Q86WR7 435 aaPredicted RBP11.49□□□□□ -0.57
LAMP2-204ENST00000486593 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
LAMP2-204ENST00000486593 A0A1W2PP64 1363 aa11.49□□□□□ -0.57
LAMP2-204ENST00000486593 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
LAMP2-204ENST00000486593 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
LAMP2-204ENST00000486593 ANKRD26Q9UPS8 1709 aa11.49□□□□□ -0.57
LAMP2-204ENST00000486593 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
LAMP2-204ENST00000486593 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 GNPATO15228 680 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 RNF40O75150 1001 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 C14orf37Q86TY3 774 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 C19orf44Q9H6X5 657 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
LAMP2-204ENST00000486593 EDC4Q6P2E9 1401 aaKnown RBP11.48□□□□□ -0.57
LAMP2-204ENST00000486593 CD163L1Q9NR16 1453 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 KIF1AQ12756 1690 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 KIF20BQ96Q89 1820 aa11.48□□□□□ -0.57
LAMP2-204ENST00000486593 RBM46Q8TBY0 533 aaKnown RBP11.47□□□□□ -0.57
LAMP2-204ENST00000486593 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
LAMP2-204ENST00000486593 TMEM134Q9H6X4 195 aa11.47□□□□□ -0.57
LAMP2-204ENST00000486593 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
LAMP2-204ENST00000486593 POLR3AO14802 1390 aaPredicted RBP11.46□□□□□ -0.57
LAMP2-204ENST00000486593 MSH6P52701 1360 aa11.46□□□□□ -0.57
LAMP2-204ENST00000486593 NRKQ7Z2Y5 1582 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 DNAJB2P25686 324 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 TJAP1Q5JTD0 557 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 NLRP13Q86W25 1043 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 GPIHBP1Q8IV16 184 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 PHOX2BQ99453 314 aa11.45□□□□□ -0.58
LAMP2-204ENST00000486593 ATF3P18847 181 aa11.44□□□□□ -0.58
LAMP2-204ENST00000486593 METTL3Q86U44 580 aaKnown RBP11.44□□□□□ -0.58
LAMP2-204ENST00000486593 CARD14Q9BXL6 1004 aa11.44□□□□□ -0.58
LAMP2-204ENST00000486593 LRRC7Q96NW7 1537 aa11.44□□□□□ -0.58
LAMP2-204ENST00000486593 USP6P35125 1406 aa11.43□□□□□ -0.58
LAMP2-204ENST00000486593 TTC21AQ8NDW8 1320 aa11.43□□□□□ -0.58
LAMP2-204ENST00000486593 A0A0G2JS52 829 aa11.43□□□□□ -0.58
LAMP2-204ENST00000486593 NLRP7Q8WX94 980 aa11.43□□□□□ -0.58
LAMP2-204ENST00000486593 RGPD8O14715 1765 aaPredicted RBP11.43□□□□□ -0.58
LAMP2-204ENST00000486593 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
LAMP2-204ENST00000486593 CC2D1BQ5T0F9 858 aaKnown RBP11.42□□□□□ -0.58
LAMP2-204ENST00000486593 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
LAMP2-204ENST00000486593 ACEP12821 1306 aa11.41□□□□□ -0.58
LAMP2-204ENST00000486593 MTRQ99707 1265 aa11.41□□□□□ -0.58
LAMP2-204ENST00000486593 ZNF335Q9H4Z2 1342 aaPredicted RBP11.4□□□□□ -0.58
LAMP2-204ENST00000486593 USP54Q70EL1 1684 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 C1orf167Q5SNV9 1468 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 SLC10A3P09131 477 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 KCNC4Q03721 635 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 MORC1Q86VD1 984 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 NGDNQ8NEJ9 315 aaKnown RBP11.4□□□□□ -0.58
LAMP2-204ENST00000486593 ZNF516Q92618 1163 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 MST1RQ04912 1400 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 SSH2Q76I76 1423 aa11.4□□□□□ -0.58
LAMP2-204ENST00000486593 INSRP06213 1382 aa11.4□□□□□ -0.59
LAMP2-204ENST00000486593 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
LAMP2-204ENST00000486593 OATP04181 439 aa11.39□□□□□ -0.59
LAMP2-204ENST00000486593 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
LAMP2-204ENST00000486593 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 FYB1O15117 783 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 ESCO1Q5FWF5 840 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 AATKQ6ZMQ8 1374 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 USP31Q70CQ4 1352 aa11.37□□□□□ -0.59
LAMP2-204ENST00000486593 COG3Q96JB2 828 aa11.36□□□□□ -0.59
LAMP2-204ENST00000486593 CFAP53Q96M91 514 aa11.36□□□□□ -0.59
LAMP2-204ENST00000486593 IQSEC2Q5JU85 1478 aa11.36□□□□□ -0.59
LAMP2-204ENST00000486593 OVOS2A0A0J9YW53 1432 aa11.35□□□□□ -0.59
LAMP2-204ENST00000486593 OVOS2Q6IE36 1432 aa11.35□□□□□ -0.59
LAMP2-204ENST00000486593 PSME1Q06323 249 aa11.35□□□□□ -0.59
LAMP2-204ENST00000486593 PMFBP1Q8TBY8 1022 aa11.35□□□□□ -0.59
LAMP2-204ENST00000486593 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
LAMP2-204ENST00000486593 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
LAMP2-204ENST00000486593 PIK3C2AO00443 1686 aa11.34□□□□□ -0.59
LAMP2-204ENST00000486593 COPS2P61201 443 aa11.34□□□□□ -0.59
LAMP2-204ENST00000486593 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.59
LAMP2-204ENST00000486593 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
LAMP2-204ENST00000486593 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
LAMP2-204ENST00000486593 KIF24Q5T7B8 1368 aa11.33□□□□□ -0.6
LAMP2-204ENST00000486593 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
LAMP2-204ENST00000486593 CNGB1Q14028 1251 aaPredicted RBP11.33□□□□□ -0.6
LAMP2-204ENST00000486593 GGNBP2Q9H3C7 697 aa11.33□□□□□ -0.6
LAMP2-204ENST00000486593 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
LAMP2-204ENST00000486593 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
LAMP2-204ENST00000486593 CFHP08603 1231 aa11.31□□□□□ -0.6
LAMP2-204ENST00000486593 NME9Q86XW9 330 aa11.31□□□□□ -0.6
LAMP2-204ENST00000486593 PNISRQ8TF01 805 aaKnown RBP11.31□□□□□ -0.6
LAMP2-204ENST00000486593 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
LAMP2-204ENST00000486593 MAP2K5Q13163 448 aa11.3□□□□□ -0.6
LAMP2-204ENST00000486593 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
LAMP2-204ENST00000486593 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
LAMP2-204ENST00000486593 BLOC1S3Q6QNY0 202 aa11.3□□□□□ -0.6
LAMP2-204ENST00000486593 KCNH5Q8NCM2 988 aa11.3□□□□□ -0.6
LAMP2-204ENST00000486593 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
LAMP2-204ENST00000486593 SLAIN2Q9P270 581 aa11.3□□□□□ -0.6
LAMP2-204ENST00000486593 NHSL1Q5SYE7 1610 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 160 ms