RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 HMGB2P26583 209 aaKnown RBP35.41■■■■□ 3.26
SMDT1-203ENST00000484235 KCNQ4P56696 695 aa35.41■■■■□ 3.26
SMDT1-203ENST00000484235 ANP32CO43423 234 aa35.4■■■■□ 3.26
SMDT1-203ENST00000484235 PLEKHF1Q96S99 279 aa35.4■■■■□ 3.26
SMDT1-203ENST00000484235 SLC52A2Q9HAB3 445 aa35.4■■■■□ 3.26
SMDT1-203ENST00000484235 LY75O60449 1722 aa35.38■■■■□ 3.25
SMDT1-203ENST00000484235 ATF5Q9Y2D1 282 aaPredicted RBP35.37■■■■□ 3.25
SMDT1-203ENST00000484235 LOC102724428A0A0B4J2F2 783 aa35.36■■■■□ 3.25
SMDT1-203ENST00000484235 SIK1P57059 783 aa35.36■■■■□ 3.25
SMDT1-203ENST00000484235 IL17REQ8NFR9 667 aa35.36■■■■□ 3.25
SMDT1-203ENST00000484235 WDR43Q15061 677 aaKnown RBP eCLIP35.35■■■■□ 3.25
SMDT1-203ENST00000484235 SCN11AQ9UI33 1791 aa35.34■■■■□ 3.25
SMDT1-203ENST00000484235 AKT1S1Q96B36 256 aa35.34■■■■□ 3.25
SMDT1-203ENST00000484235 SGIP1Q9BQI5 828 aa35.34■■■■□ 3.25
SMDT1-203ENST00000484235 HTATSF1O43719 755 aaKnown RBP35.31■■■■□ 3.24
SMDT1-203ENST00000484235 ZNF827Q17R98 1081 aa35.31■■■■□ 3.24
SMDT1-203ENST00000484235 RTF1Q92541 710 aaKnown RBP35.31■■■■□ 3.24
SMDT1-203ENST00000484235 MAPK8IP3Q9UPT6 1336 aa35.31■■■■□ 3.24
SMDT1-203ENST00000484235 ADAMTS7Q9UKP4 1686 aa35.3■■■■□ 3.24
SMDT1-203ENST00000484235 MTFR1LQ9H019 292 aa35.3■■■■□ 3.24
SMDT1-203ENST00000484235 PAPPAQ13219 1627 aa35.3■■■■□ 3.24
SMDT1-203ENST00000484235 ATP6V1AP38606 617 aa35.29■■■■□ 3.24
SMDT1-203ENST00000484235 TEFQ10587 303 aa35.29■■■■□ 3.24
SMDT1-203ENST00000484235 MRC1P22897 1456 aa35.29■■■■□ 3.24
SMDT1-203ENST00000484235 DCAF8L1A6NGE4 600 aa35.28■■■■□ 3.24
SMDT1-203ENST00000484235 RBM42Q9BTD8 480 aaKnown RBP35.28■■■■□ 3.24
SMDT1-203ENST00000484235 ADAMTS8Q9UP79 889 aa35.28■■■■□ 3.24
SMDT1-203ENST00000484235 CEMIPQ8WUJ3 1361 aa35.27■■■■□ 3.24
SMDT1-203ENST00000484235 NFE2L2Q16236 605 aa35.27■■■■□ 3.24
SMDT1-203ENST00000484235 TFCP2L1Q9NZI6 479 aa35.26■■■■□ 3.24
SMDT1-203ENST00000484235 PTCD1O75127 700 aaKnown RBP35.25■■■■□ 3.23
SMDT1-203ENST00000484235 SYT17Q9BSW7 474 aa35.25■■■■□ 3.23
SMDT1-203ENST00000484235 ITPK1Q13572 414 aa35.24■■■■□ 3.23
SMDT1-203ENST00000484235 SLC4A9Q96Q91 983 aa35.24■■■■□ 3.23
SMDT1-203ENST00000484235 FHDC1Q9C0D6 1143 aaPredicted RBP35.24■■■■□ 3.23
SMDT1-203ENST00000484235 MCM10Q7L590 875 aa35.23■■■■□ 3.23
SMDT1-203ENST00000484235 SLC39A6Q13433 755 aa35.22■■■■□ 3.23
SMDT1-203ENST00000484235 CCDC184Q52MB2 194 aa35.21■■■■□ 3.23
SMDT1-203ENST00000484235 LINC00116Q8NCU8 138 aa35.21■■■■□ 3.23
SMDT1-203ENST00000484235 RUNDC1Q96C34 613 aa35.21■■■■□ 3.23
SMDT1-203ENST00000484235 DCTN1Q14203 1278 aa35.19■■■■□ 3.22
SMDT1-203ENST00000484235 CCDC146Q8IYE0 955 aa35.19■■■■□ 3.22
SMDT1-203ENST00000484235 AK7Q96M32 723 aa35.17■■■■□ 3.22
SMDT1-203ENST00000484235 C5P01031 1676 aa35.17■■■■□ 3.22
SMDT1-203ENST00000484235 PNPLA7Q6ZV29 1317 aa35.16■■■■□ 3.22
SMDT1-203ENST00000484235 TMPOP42166 694 aaKnown RBP35.16■■■■□ 3.22
SMDT1-203ENST00000484235 TTC5Q8N0Z6 440 aa35.16■■■■□ 3.22
SMDT1-203ENST00000484235 VIRMAQ69YN4 1812 aaKnown RBP35.16■■■■□ 3.22
SMDT1-203ENST00000484235 BTBD11A6QL63 1104 aa35.15■■■■□ 3.22
SMDT1-203ENST00000484235 RIPK4P57078 832 aa35.15■■■■□ 3.22
SMDT1-203ENST00000484235 ZNF790Q6PG37 636 aa35.15■■■■□ 3.22
SMDT1-203ENST00000484235 MRS2Q9HD23 443 aa35.15■■■■□ 3.22
SMDT1-203ENST00000484235 FLAD1Q8NFF5 587 aa35.13■■■■□ 3.21
SMDT1-203ENST00000484235 ARXQ96QS3 562 aa35.13■■■■□ 3.21
SMDT1-203ENST00000484235 ZNF831Q5JPB2 1677 aa35.13■■■■□ 3.21
SMDT1-203ENST00000484235 TAF1LQ8IZX4 1826 aa35.13■■■■□ 3.21
SMDT1-203ENST00000484235 TAF7Q15545 349 aaPredicted RBP35.12■■■■□ 3.21
SMDT1-203ENST00000484235 RC3H1Q5TC82 1133 aaKnown RBP35.12■■■■□ 3.21
SMDT1-203ENST00000484235 PNISRQ8TF01 805 aaKnown RBP35.12■■■■□ 3.21
SMDT1-203ENST00000484235 C4BP0C0L5 1744 aa35.12■■■■□ 3.21
SMDT1-203ENST00000484235 VSIG10Q8N0Z9 540 aa35.11■■■■□ 3.21
SMDT1-203ENST00000484235 SLC16A10Q8TF71 515 aa35.11■■■■□ 3.21
SMDT1-203ENST00000484235 LMOD3Q0VAK6 560 aa35.09■■■■□ 3.21
SMDT1-203ENST00000484235 COL23A1Q86Y22 540 aaPredicted RBP35.09■■■■□ 3.21
SMDT1-203ENST00000484235 UTRNP46939 3433 aa35.09■■■■□ 3.21
SMDT1-203ENST00000484235 ZNF496Q96IT1 587 aaPredicted RBP35.08■■■■□ 3.21
SMDT1-203ENST00000484235 RRP7AQ9Y3A4 280 aaKnown RBP35.08■■■■□ 3.21
SMDT1-203ENST00000484235 CNTNAP4Q9C0A0 1308 aa35.07■■■■□ 3.21
SMDT1-203ENST00000484235 KCPQ6ZWJ8 1503 aa35.07■■■■□ 3.21
SMDT1-203ENST00000484235 GNPATO15228 680 aa35.07■■■■□ 3.2
SMDT1-203ENST00000484235 SIPA1L3O60292 1781 aaPredicted RBP35.07■■■■□ 3.2
SMDT1-203ENST00000484235 SSFA2P28290 1259 aa35.06■■■■□ 3.2
SMDT1-203ENST00000484235 NEUROD2Q15784 382 aa35.06■■■■□ 3.2
SMDT1-203ENST00000484235 DNAJC10Q8IXB1 793 aa35.06■■■■□ 3.2
SMDT1-203ENST00000484235 THUMPD2Q9BTF0 503 aaKnown RBP35.06■■■■□ 3.2
SMDT1-203ENST00000484235 QSER1Q2KHR3 1735 aa35.06■■■■□ 3.2
SMDT1-203ENST00000484235 MSH5O43196 834 aa35.05■■■■□ 3.2
SMDT1-203ENST00000484235 FMNL2Q96PY5 1086 aa35.05■■■■□ 3.2
SMDT1-203ENST00000484235 DLG5Q8TDM6 1919 aa35.04■■■■□ 3.2
SMDT1-203ENST00000484235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.04■■■■□ 3.2
SMDT1-203ENST00000484235 KCNQ3O43525 872 aa35.04■■■■□ 3.2
SMDT1-203ENST00000484235 AMIGO3Q86WK7 504 aa35.04■■■■□ 3.2
SMDT1-203ENST00000484235 CRKLP46109 303 aaKnown RBP35.03■■■■□ 3.2
SMDT1-203ENST00000484235 RTCBQ9Y3I0 505 aaKnown RBP35.03■■■■□ 3.2
SMDT1-203ENST00000484235 ZNF784Q8NCA9 323 aaPredicted RBP35.02■■■■□ 3.2
SMDT1-203ENST00000484235 TEX13AQ9BXU3 409 aaPredicted RBP35.02■■■■□ 3.2
SMDT1-203ENST00000484235 HEG1Q9ULI3 1381 aa35.01■■■■□ 3.2
SMDT1-203ENST00000484235 RPS6KA4O75676 772 aa35.01■■■■□ 3.2
SMDT1-203ENST00000484235 PHF14O94880 888 aa35.01■■■■□ 3.2
SMDT1-203ENST00000484235 CYP19A1P11511 503 aaPredicted RBP35.01■■■■□ 3.2
SMDT1-203ENST00000484235 MIS18AQ9NYP9 233 aa35.01■■■■□ 3.2
SMDT1-203ENST00000484235 APAF1O14727 1248 aa35■■■■□ 3.19
SMDT1-203ENST00000484235 SMIM5Q71RC9 77 aa35■■■■□ 3.19
SMDT1-203ENST00000484235 TRIM35Q9UPQ4 493 aa35■■■■□ 3.19
SMDT1-203ENST00000484235 COL24A1Q17RW2 1714 aa34.99■■■■□ 3.19
SMDT1-203ENST00000484235 TRAPPC3LQ5T215 181 aa34.99■■■■□ 3.19
SMDT1-203ENST00000484235 INTS5Q6P9B9 1019 aaKnown RBP34.99■■■■□ 3.19
SMDT1-203ENST00000484235 UBR2Q8IWV8 1755 aa34.99■■■■□ 3.19
SMDT1-203ENST00000484235 TUBGCP6Q96RT7 1819 aa34.99■■■■□ 3.19
SMDT1-203ENST00000484235 CICQ96RK0 1608 aaPredicted RBP34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms