RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, human

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCB-215	ENST00000482086	GLI3	P10071	1580 aa		18.87	■□□□□ 0.61
PCCB-215	ENST00000482086	THSD7A	Q9UPZ6	1657 aa		18.87	■□□□□ 0.61
PCCB-215	ENST00000482086	SOS1	Q07889	1333 aa	Predicted RBP	18.86	■□□□□ 0.61
PCCB-215	ENST00000482086	CABP4	P57796	275 aa		18.86	■□□□□ 0.61
PCCB-215	ENST00000482086	ONECUT3	O60422	494 aa	Predicted RBP	18.85	■□□□□ 0.61
PCCB-215	ENST00000482086	CHMP4A	Q9BY43	222 aa		18.84	■□□□□ 0.61
PCCB-215	ENST00000482086		A0A0G2JS52	829 aa		18.83	■□□□□ 0.61
PCCB-215	ENST00000482086	MYT1	Q01538	1121 aa		18.83	■□□□□ 0.61
PCCB-215	ENST00000482086	NFATC2IP	Q8NCF5	419 aa		18.83	■□□□□ 0.61
PCCB-215	ENST00000482086	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.83	■□□□□ 0.61
PCCB-215	ENST00000482086	TWISTNB	Q3B726	338 aa	Predicted RBP	18.83	■□□□□ 0.6
PCCB-215	ENST00000482086	MIS18A	Q9NYP9	233 aa		18.83	■□□□□ 0.6
PCCB-215	ENST00000482086	ITGB4	P16144	1822 aa		18.82	■□□□□ 0.6
PCCB-215	ENST00000482086	CACNA1F	O60840	1977 aa		18.82	■□□□□ 0.6
PCCB-215	ENST00000482086	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.82	■□□□□ 0.6
PCCB-215	ENST00000482086	RBM6	P78332	1123 aa	Known RBP	18.81	■□□□□ 0.6
PCCB-215	ENST00000482086	ALDH1L2	Q3SY69	923 aa		18.81	■□□□□ 0.6
PCCB-215	ENST00000482086	TMOD3	Q9NYL9	352 aa		18.81	■□□□□ 0.6
PCCB-215	ENST00000482086	TOGARAM1	Q9Y4F4	1720 aa		18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	VAMP4	O75379	141 aa		18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	HOXB7	P09629	217 aa		18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	RARS	P54136	660 aa	Known RBP	18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	MARCH10	Q8NA82	808 aa	Predicted RBP	18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	C8orf58	Q8NAV2	365 aa		18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	RNF123	Q5XPI4	1314 aa		18.8	■□□□□ 0.6
PCCB-215	ENST00000482086	NEFL	P07196	543 aa		18.79	■□□□□ 0.6
PCCB-215	ENST00000482086	EIF4A1	P60842	406 aa	Known RBP	18.79	■□□□□ 0.6
PCCB-215	ENST00000482086	ZNF790	Q6PG37	636 aa		18.79	■□□□□ 0.6
PCCB-215	ENST00000482086	TTC5	Q8N0Z6	440 aa		18.79	■□□□□ 0.6
PCCB-215	ENST00000482086	DOT1L	Q8TEK3	1739 aa		18.78	■□□□□ 0.6
PCCB-215	ENST00000482086	SEPT12	Q8IYM1	358 aa		18.77	■□□□□ 0.6
PCCB-215	ENST00000482086	ELL2	O00472	640 aa	Predicted RBP	18.76	■□□□□ 0.59
PCCB-215	ENST00000482086	RRP1	P56182	461 aa	Known RBP	18.76	■□□□□ 0.59
PCCB-215	ENST00000482086	TSPYL6	Q8N831	410 aa		18.76	■□□□□ 0.59
PCCB-215	ENST00000482086	PAPPA	Q13219	1627 aa		18.76	■□□□□ 0.59
PCCB-215	ENST00000482086	BRPF1	P55201	1214 aa	Predicted RBP	18.75	■□□□□ 0.59
PCCB-215	ENST00000482086	BCL9	O00512	1426 aa		18.75	■□□□□ 0.59
PCCB-215	ENST00000482086	FMNL2	Q96PY5	1086 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	SMC4	Q9NTJ3	1288 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	HEG1	Q9ULI3	1381 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	UBR2	Q8IWV8	1755 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	RXRB	P28702	533 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	SLC39A6	Q13433	755 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	CCDC30	Q5VVM6	783 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	SSH1	Q8WYL5	1049 aa		18.74	■□□□□ 0.59
PCCB-215	ENST00000482086	KIF16B	Q96L93	1317 aa		18.73	■□□□□ 0.59
PCCB-215	ENST00000482086	KCNQ3	O43525	872 aa		18.73	■□□□□ 0.59
PCCB-215	ENST00000482086	BCAR3	O75815	825 aa		18.73	■□□□□ 0.59
PCCB-215	ENST00000482086	KRT24	Q2M2I5	525 aa		18.73	■□□□□ 0.59
PCCB-215	ENST00000482086	PIGB	Q92521	554 aa		18.73	■□□□□ 0.59
PCCB-215	ENST00000482086	IPO8	O15397	1037 aa	Known RBP	18.72	■□□□□ 0.59
PCCB-215	ENST00000482086	GIGYF1	O75420	1035 aa	Predicted RBP	18.72	■□□□□ 0.59
PCCB-215	ENST00000482086	PRIM1	P49642	420 aa	Known RBP	18.72	■□□□□ 0.59
PCCB-215	ENST00000482086	SYTL4	Q96C24	671 aa	Predicted RBP	18.72	■□□□□ 0.59
PCCB-215	ENST00000482086	STK31	Q9BXU1	1019 aa		18.72	■□□□□ 0.59
PCCB-215	ENST00000482086	BRWD3	Q6RI45	1802 aa		18.72	■□□□□ 0.59
PCCB-215	ENST00000482086	SNRPA1	P09661	255 aa	Known RBP	18.71	■□□□□ 0.59
PCCB-215	ENST00000482086	MS4A1	P11836	297 aa		18.71	■□□□□ 0.59
PCCB-215	ENST00000482086	CANX	P27824	592 aa	Known RBP	18.71	■□□□□ 0.59
PCCB-215	ENST00000482086	HDGFL1	Q5TGJ6	251 aa		18.7	■□□□□ 0.58
PCCB-215	ENST00000482086	KRT27	Q7Z3Y8	459 aa		18.69	■□□□□ 0.58
PCCB-215	ENST00000482086	MRPL50	Q8N5N7	158 aa	Known RBP	18.69	■□□□□ 0.58
PCCB-215	ENST00000482086	ZNF496	Q96IT1	587 aa	Predicted RBP	18.69	■□□□□ 0.58
PCCB-215	ENST00000482086	BCL2L13	Q9BXK5	485 aa		18.69	■□□□□ 0.58
PCCB-215	ENST00000482086	SBF2	Q86WG5	1849 aa		18.69	■□□□□ 0.58
PCCB-215	ENST00000482086	VSIG10	Q8N0Z9	540 aa		18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	SMARCC1	Q92922	1105 aa	Predicted RBP	18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	ACSBG1	Q96GR2	724 aa		18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	ATG3	Q9NT62	314 aa		18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	NHS	Q6T4R5	1651 aa		18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	KCP	Q6ZWJ8	1503 aa		18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	LAMB4	A4D0S4	1761 aa		18.68	■□□□□ 0.58
PCCB-215	ENST00000482086	PDE3A	Q14432	1141 aa		18.67	■□□□□ 0.58
PCCB-215	ENST00000482086	ERICH6B	Q5W0A0	696 aa		18.67	■□□□□ 0.58
PCCB-215	ENST00000482086	ZKSCAN2	Q63HK3	967 aa		18.67	■□□□□ 0.58
PCCB-215	ENST00000482086	ARHGAP45	Q92619	1136 aa		18.67	■□□□□ 0.58
PCCB-215	ENST00000482086	FRAT1	Q92837	279 aa	Predicted RBP	18.67	■□□□□ 0.58
PCCB-215	ENST00000482086	RGS17	Q9UGC6	210 aa	Predicted RBP	18.67	■□□□□ 0.58
PCCB-215	ENST00000482086	FAM196A	Q6ZSG2	479 aa		18.66	■□□□□ 0.58
PCCB-215	ENST00000482086	ASAP1	Q9ULH1	1129 aa		18.66	■□□□□ 0.58
PCCB-215	ENST00000482086	SLC4A2	P04920	1241 aa		18.66	■□□□□ 0.58
PCCB-215	ENST00000482086	EIF2S2	P20042	333 aa	Known RBP	18.66	■□□□□ 0.58
PCCB-215	ENST00000482086	C5	P01031	1676 aa		18.65	■□□□□ 0.58
PCCB-215	ENST00000482086	PTPRC	P08575	1304 aa		18.65	■□□□□ 0.58
PCCB-215	ENST00000482086	PLIN1	O60240	522 aa		18.65	■□□□□ 0.58
PCCB-215	ENST00000482086	DBF4	Q9UBU7	674 aa	Predicted RBP	18.65	■□□□□ 0.58
PCCB-215	ENST00000482086	NOB1	Q9ULX3	412 aa	Known RBP	18.65	■□□□□ 0.58
PCCB-215	ENST00000482086	ERBB4	Q15303	1308 aa		18.64	■□□□□ 0.57
PCCB-215	ENST00000482086	PTCD1	O75127	700 aa	Known RBP	18.64	■□□□□ 0.57
PCCB-215	ENST00000482086	ATF7IP	Q6VMQ6	1270 aa		18.64	■□□□□ 0.57
PCCB-215	ENST00000482086	ILDR1	Q86SU0	546 aa	Predicted RBP	18.64	■□□□□ 0.57
PCCB-215	ENST00000482086	API5	Q9BZZ5	524 aa	Known RBP	18.64	■□□□□ 0.57
PCCB-215	ENST00000482086	FKBP8	Q14318	412 aa		18.63	■□□□□ 0.57
PCCB-215	ENST00000482086	POTEA	Q6S8J7	498 aa		18.63	■□□□□ 0.57
PCCB-215	ENST00000482086	GTF3C3	Q9Y5Q9	886 aa		18.63	■□□□□ 0.57
PCCB-215	ENST00000482086	BTAF1	O14981	1849 aa		18.63	■□□□□ 0.57
PCCB-215	ENST00000482086	TCERG1	O14776	1098 aa	Known RBP	18.62	■□□□□ 0.57
PCCB-215	ENST00000482086	KCNQ2	O43526	872 aa		18.62	■□□□□ 0.57
PCCB-215	ENST00000482086	RBM42	Q9BTD8	480 aa	Known RBP	18.62	■□□□□ 0.57

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