RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 THUMPD2Q9BTF0 503 aaKnown RBP27.1■■□□□ 1.93
VPS16-207ENST00000481812 BCL11BQ9C0K0 894 aaPredicted RBP27.1■■□□□ 1.93
VPS16-207ENST00000481812 EP400Q96L91 3159 aa27.08■■□□□ 1.93
VPS16-207ENST00000481812 KCNQ2O43526 872 aa27.08■■□□□ 1.93
VPS16-207ENST00000481812 PIGBQ92521 554 aa27.08■■□□□ 1.93
VPS16-207ENST00000481812 ZBED9Q6R2W3 1325 aa27.08■■□□□ 1.93
VPS16-207ENST00000481812 BTAF1O14981 1849 aa27.07■■□□□ 1.92
VPS16-207ENST00000481812 SYTL4Q96C24 671 aaPredicted RBP27.07■■□□□ 1.92
VPS16-207ENST00000481812 ZNF853P0CG23 659 aa27.06■■□□□ 1.92
VPS16-207ENST00000481812 CFAP44Q96MT7 982 aa27.06■■□□□ 1.92
VPS16-207ENST00000481812 IFT57Q9NWB7 429 aa27.06■■□□□ 1.92
VPS16-207ENST00000481812 PAPPAQ13219 1627 aa27.05■■□□□ 1.92
VPS16-207ENST00000481812 GNAI1P63096 354 aa27.05■■□□□ 1.92
VPS16-207ENST00000481812 KDM3BQ7LBC6 1761 aa27.04■■□□□ 1.92
VPS16-207ENST00000481812 CHL1O00533 1208 aa27.04■■□□□ 1.92
VPS16-207ENST00000481812 TRIM37O94972 964 aa27.04■■□□□ 1.92
VPS16-207ENST00000481812 BTBD11A6QL63 1104 aa27.03■■□□□ 1.92
VPS16-207ENST00000481812 GOLGA2Q08379 1002 aa27.03■■□□□ 1.92
VPS16-207ENST00000481812 TNS1Q9HBL0 1735 aaKnown RBP27.02■■□□□ 1.92
VPS16-207ENST00000481812 SMARCC1Q92922 1105 aaPredicted RBP27.01■■□□□ 1.91
VPS16-207ENST00000481812 UBR2Q8IWV8 1755 aa27■■□□□ 1.91
VPS16-207ENST00000481812 PTF1AQ7RTS3 328 aa27■■□□□ 1.91
VPS16-207ENST00000481812 CCDC125Q86Z20 511 aa27■■□□□ 1.91
VPS16-207ENST00000481812 ZNF790Q6PG37 636 aa26.99■■□□□ 1.91
VPS16-207ENST00000481812 ATG3Q9NT62 314 aa26.99■■□□□ 1.91
VPS16-207ENST00000481812 TSPYL4Q9UJ04 414 aa26.99■■□□□ 1.91
VPS16-207ENST00000481812 E9PSI1 815 aa26.98■■□□□ 1.91
VPS16-207ENST00000481812 ILDR2Q71H61 639 aa26.98■■□□□ 1.91
VPS16-207ENST00000481812 ASAP1Q9ULH1 1129 aa26.98■■□□□ 1.91
VPS16-207ENST00000481812 LAS1LQ9Y4W2 734 aaKnown RBP26.97■■□□□ 1.91
VPS16-207ENST00000481812 RGPD3A6NKT7 1758 aaPredicted RBP26.97■■□□□ 1.91
VPS16-207ENST00000481812 RGPD4Q7Z3J3 1758 aa26.97■■□□□ 1.91
VPS16-207ENST00000481812 PLSCR1O15162 318 aa26.96■■□□□ 1.91
VPS16-207ENST00000481812 SLFN5Q08AF3 891 aa26.96■■□□□ 1.91
VPS16-207ENST00000481812 TTC5Q8N0Z6 440 aa26.96■■□□□ 1.91
VPS16-207ENST00000481812 MYH16Q9H6N6 1097 aa26.96■■□□□ 1.91
VPS16-207ENST00000481812 MIS18AQ9NYP9 233 aa26.96■■□□□ 1.91
VPS16-207ENST00000481812 LY75O60449 1722 aa26.96■■□□□ 1.91
VPS16-207ENST00000481812 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.91
VPS16-207ENST00000481812 SLC39A6Q13433 755 aa26.95■■□□□ 1.9
VPS16-207ENST00000481812 TRMT2AQ8IZ69 625 aaKnown RBP26.95■■□□□ 1.9
VPS16-207ENST00000481812 SPINK5Q9NQ38 1064 aaPredicted RBP26.95■■□□□ 1.9
VPS16-207ENST00000481812 MBIPQ9NS73 344 aa26.95■■□□□ 1.9
VPS16-207ENST00000481812 KCPQ6ZWJ8 1503 aa26.94■■□□□ 1.9
VPS16-207ENST00000481812 PALLDQ8WX93 1383 aa26.94■■□□□ 1.9
VPS16-207ENST00000481812 KCNQ3O43525 872 aa26.92■■□□□ 1.9
VPS16-207ENST00000481812 APBA3O96018 575 aa26.92■■□□□ 1.9
VPS16-207ENST00000481812 EIF4A1P60842 406 aaKnown RBP26.92■■□□□ 1.9
VPS16-207ENST00000481812 SF3B2Q13435 895 aaKnown RBP26.92■■□□□ 1.9
VPS16-207ENST00000481812 YTHDC1Q96MU7 727 aaKnown RBP26.92■■□□□ 1.9
VPS16-207ENST00000481812 HEG1Q9ULI3 1381 aa26.92■■□□□ 1.9
VPS16-207ENST00000481812 CICQ96RK0 1608 aaPredicted RBP26.91■■□□□ 1.9
VPS16-207ENST00000481812 VSIG10Q8N0Z9 540 aa26.91■■□□□ 1.9
VPS16-207ENST00000481812 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
VPS16-207ENST00000481812 FANCIQ9NVI1 1328 aa26.9■■□□□ 1.9
VPS16-207ENST00000481812 CDCA7LQ96GN5 454 aa26.9■■□□□ 1.9
VPS16-207ENST00000481812 ZNF496Q96IT1 587 aaPredicted RBP26.89■■□□□ 1.9
VPS16-207ENST00000481812 HMGB2P26583 209 aaKnown RBP26.88■■□□□ 1.89
VPS16-207ENST00000481812 UPF1Q92900 1129 aaKnown RBP eCLIP26.88■■□□□ 1.89
VPS16-207ENST00000481812 TSR2Q969E8 191 aaKnown RBP26.88■■□□□ 1.89
VPS16-207ENST00000481812 LOC102724428A0A0B4J2F2 783 aa26.87■■□□□ 1.89
VPS16-207ENST00000481812 BAG6P46379 1132 aa26.87■■□□□ 1.89
VPS16-207ENST00000481812 SIK1P57059 783 aa26.87■■□□□ 1.89
VPS16-207ENST00000481812 DUSP27Q5VZP5 1158 aa26.87■■□□□ 1.89
VPS16-207ENST00000481812 SOS1Q07889 1333 aaPredicted RBP26.87■■□□□ 1.89
VPS16-207ENST00000481812 PTCD1O75127 700 aaKnown RBP26.86■■□□□ 1.89
VPS16-207ENST00000481812 SLC27A3Q5K4L6 730 aa26.86■■□□□ 1.89
VPS16-207ENST00000481812 RBM42Q9BTD8 480 aaKnown RBP26.86■■□□□ 1.89
VPS16-207ENST00000481812 HOXB7P09629 217 aa26.85■■□□□ 1.89
VPS16-207ENST00000481812 TEX13AQ9BXU3 409 aaPredicted RBP26.85■■□□□ 1.89
VPS16-207ENST00000481812 GIGYF1O75420 1035 aaPredicted RBP26.84■■□□□ 1.89
VPS16-207ENST00000481812 SNRPA1P09661 255 aaKnown RBP26.84■■□□□ 1.89
VPS16-207ENST00000481812 SLC4A9Q96Q91 983 aa26.84■■□□□ 1.89
VPS16-207ENST00000481812 CAMKK2Q96RR4 588 aa26.83■■□□□ 1.89
VPS16-207ENST00000481812 TAF1LQ8IZX4 1826 aa26.83■■□□□ 1.89
VPS16-207ENST00000481812 TJP1Q07157 1748 aa26.82■■□□□ 1.88
VPS16-207ENST00000481812 LAMB4A4D0S4 1761 aa26.81■■□□□ 1.88
VPS16-207ENST00000481812 ATP6V1AP38606 617 aa26.81■■□□□ 1.88
VPS16-207ENST00000481812 TXNRD1Q16881 649 aa26.81■■□□□ 1.88
VPS16-207ENST00000481812 PROM2Q8N271 834 aa26.81■■□□□ 1.88
VPS16-207ENST00000481812 CHMP4AQ9BY43 222 aa26.81■■□□□ 1.88
VPS16-207ENST00000481812 CCNL1Q9UK58 526 aaPredicted RBP26.81■■□□□ 1.88
VPS16-207ENST00000481812 C5P01031 1676 aa26.8■■□□□ 1.88
VPS16-207ENST00000481812 COL5A3P25940 1745 aaPredicted RBP26.8■■□□□ 1.88
VPS16-207ENST00000481812 EXOSC9Q06265 439 aaKnown RBP26.8■■□□□ 1.88
VPS16-207ENST00000481812 C8orf58Q8NAV2 365 aa26.8■■□□□ 1.88
VPS16-207ENST00000481812 CT47B1P0C2W7 299 aaPredicted RBP26.79■■□□□ 1.88
VPS16-207ENST00000481812 RREB1Q92766 1687 aa26.79■■□□□ 1.88
VPS16-207ENST00000481812 EN1Q05925 392 aaPredicted RBP26.78■■□□□ 1.88
VPS16-207ENST00000481812 KRT24Q2M2I5 525 aa26.78■■□□□ 1.88
VPS16-207ENST00000481812 TWISTNBQ3B726 338 aaPredicted RBP26.77■■□□□ 1.88
VPS16-207ENST00000481812 LRRC4BQ9NT99 713 aa26.77■■□□□ 1.88
VPS16-207ENST00000481812 STARD3NLO95772 234 aa26.76■■□□□ 1.87
VPS16-207ENST00000481812 ITPK1Q13572 414 aa26.76■■□□□ 1.87
VPS16-207ENST00000481812 DNAJC10Q8IXB1 793 aa26.76■■□□□ 1.87
VPS16-207ENST00000481812 TSPYL6Q8N831 410 aa26.76■■□□□ 1.87
VPS16-207ENST00000481812 VAMP4O75379 141 aa26.75■■□□□ 1.87
VPS16-207ENST00000481812 EZH2Q15910 746 aaKnown RBP26.75■■□□□ 1.87
VPS16-207ENST00000481812 DEFB132Q7Z7B7 95 aa26.75■■□□□ 1.87
VPS16-207ENST00000481812 ZNF428Q96B54 188 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms