RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 PTMAP06454 111 aaKnown RBP17.35■□□□□ 0.37
NR1H3-220ENST00000481020 PDIA4P13667 645 aaKnown RBP17.35■□□□□ 0.37
NR1H3-220ENST00000481020 PIBF1Q8WXW3 757 aa17.35■□□□□ 0.37
NR1H3-220ENST00000481020 TECPR2O15040 1411 aa17.35■□□□□ 0.37
NR1H3-220ENST00000481020 SPATA31D1Q6ZQQ2 1576 aa17.35■□□□□ 0.37
NR1H3-220ENST00000481020 GNAI2P04899 355 aa17.34■□□□□ 0.37
NR1H3-220ENST00000481020 GNAI3P08754 354 aa17.34■□□□□ 0.37
NR1H3-220ENST00000481020 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
NR1H3-220ENST00000481020 MEIS3Q99687 375 aa17.34■□□□□ 0.37
NR1H3-220ENST00000481020 TUBGCP6Q96RT7 1819 aa17.33■□□□□ 0.37
NR1H3-220ENST00000481020 TTC21BQ7Z4L5 1316 aa17.33■□□□□ 0.37
NR1H3-220ENST00000481020 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.37
NR1H3-220ENST00000481020 ATP6V1DQ9Y5K8 247 aa17.33■□□□□ 0.37
NR1H3-220ENST00000481020 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.37
NR1H3-220ENST00000481020 AK9Q5TCS8 1911 aa17.33■□□□□ 0.36
NR1H3-220ENST00000481020 CRB1P82279 1406 aa17.33■□□□□ 0.36
NR1H3-220ENST00000481020 CCDC183Q5T5S1 534 aa17.33■□□□□ 0.36
NR1H3-220ENST00000481020 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
NR1H3-220ENST00000481020 MX1P20591 662 aa17.32■□□□□ 0.36
NR1H3-220ENST00000481020 NME9Q86XW9 330 aa17.32■□□□□ 0.36
NR1H3-220ENST00000481020 CCDC94Q9BW85 323 aaPredicted RBP17.32■□□□□ 0.36
NR1H3-220ENST00000481020 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
NR1H3-220ENST00000481020 SMARCA5O60264 1052 aaPredicted RBP17.31■□□□□ 0.36
NR1H3-220ENST00000481020 CHMLP26374 656 aa17.31■□□□□ 0.36
NR1H3-220ENST00000481020 SPTLC3Q9NUV7 552 aa17.31■□□□□ 0.36
NR1H3-220ENST00000481020 RGPD1P0DJD0 1748 aa17.31■□□□□ 0.36
NR1H3-220ENST00000481020 ITSN1Q15811 1721 aa17.31■□□□□ 0.36
NR1H3-220ENST00000481020 FAM83GA6ND36 823 aa17.3■□□□□ 0.36
NR1H3-220ENST00000481020 RBM10P98175 930 aaKnown RBP17.3■□□□□ 0.36
NR1H3-220ENST00000481020 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.3■□□□□ 0.36
NR1H3-220ENST00000481020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.3■□□□□ 0.36
NR1H3-220ENST00000481020 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
NR1H3-220ENST00000481020 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
NR1H3-220ENST00000481020 CPS1P31327 1500 aa17.29■□□□□ 0.36
NR1H3-220ENST00000481020 HTATSF1O43719 755 aaKnown RBP17.29■□□□□ 0.36
NR1H3-220ENST00000481020 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
NR1H3-220ENST00000481020 UBE2HP62256 183 aa17.29■□□□□ 0.36
NR1H3-220ENST00000481020 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-220ENST00000481020 HSPA4P34932 840 aa17.28■□□□□ 0.36
NR1H3-220ENST00000481020 ATP8B2P98198 1209 aa17.28■□□□□ 0.36
NR1H3-220ENST00000481020 NUDT16Q96DE0 195 aaKnown RBP17.28■□□□□ 0.36
NR1H3-220ENST00000481020 STAG3Q9UJ98 1225 aa17.28■□□□□ 0.36
NR1H3-220ENST00000481020 RPAP1Q9BWH6 1393 aaPredicted RBP17.28■□□□□ 0.36
NR1H3-220ENST00000481020 MLECQ14165 292 aa17.27■□□□□ 0.36
NR1H3-220ENST00000481020 EIF4A2Q14240 407 aaKnown RBP17.27■□□□□ 0.36
NR1H3-220ENST00000481020 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
NR1H3-220ENST00000481020 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-220ENST00000481020 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
NR1H3-220ENST00000481020 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
NR1H3-220ENST00000481020 RAB11FIP3O75154 756 aa17.27■□□□□ 0.35
NR1H3-220ENST00000481020 NOLC1Q14978 699 aaKnown RBP eCLIP17.27■□□□□ 0.35
NR1H3-220ENST00000481020 PRDM4Q9UKN5 801 aa17.27■□□□□ 0.35
NR1H3-220ENST00000481020 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-220ENST00000481020 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 USP48Q86UV5 1035 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 ANO2Q9NQ90 1003 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 USP25Q9UHP3 1055 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
NR1H3-220ENST00000481020 NALCNQ8IZF0 1738 aa17.25■□□□□ 0.35
NR1H3-220ENST00000481020 FBLN1P23142 703 aa17.25■□□□□ 0.35
NR1H3-220ENST00000481020 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
NR1H3-220ENST00000481020 DIAPH3Q9NSV4 1193 aa17.25■□□□□ 0.35
NR1H3-220ENST00000481020 ZSCAN22P10073 491 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-220ENST00000481020 GOLGA6L6A8MZA4 724 aa17.24■□□□□ 0.35
NR1H3-220ENST00000481020 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
NR1H3-220ENST00000481020 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
NR1H3-220ENST00000481020 KDRP35968 1356 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 NRXN3Q9Y4C0 1643 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 KDM4AO75164 1064 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 DNTTIP2Q5QJE6 756 aaKnown RBP17.23■□□□□ 0.35
NR1H3-220ENST00000481020 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
NR1H3-220ENST00000481020 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 RAD50Q92878 1312 aa17.23■□□□□ 0.35
NR1H3-220ENST00000481020 APBB1O00213 710 aa17.22■□□□□ 0.35
NR1H3-220ENST00000481020 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
NR1H3-220ENST00000481020 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
NR1H3-220ENST00000481020 ADCY5O95622 1261 aa17.21■□□□□ 0.35
NR1H3-220ENST00000481020 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-220ENST00000481020 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-220ENST00000481020 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
NR1H3-220ENST00000481020 LIMCH1Q9UPQ0 1083 aa17.21■□□□□ 0.35
NR1H3-220ENST00000481020 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
NR1H3-220ENST00000481020 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
NR1H3-220ENST00000481020 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
NR1H3-220ENST00000481020 LRRC37A3O60309 1634 aa17.21■□□□□ 0.35
NR1H3-220ENST00000481020 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
NR1H3-220ENST00000481020 MCM10Q7L590 875 aa17.2■□□□□ 0.34
NR1H3-220ENST00000481020 TTC14Q96N46 770 aa17.2■□□□□ 0.34
NR1H3-220ENST00000481020 GTPBP4Q9BZE4 634 aaKnown RBP17.2■□□□□ 0.34
NR1H3-220ENST00000481020 EXOC6BQ9Y2D4 811 aa17.2■□□□□ 0.34
NR1H3-220ENST00000481020 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
NR1H3-220ENST00000481020 CACNA1FO60840 1977 aa17.2■□□□□ 0.34
NR1H3-220ENST00000481020 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
NR1H3-220ENST00000481020 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
NR1H3-220ENST00000481020 STX6O43752 255 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms