RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.56□□□□□ -0.72
USP33-208ENST00000477949 J3QL48 77 aa10.56□□□□□ -0.72
USP33-208ENST00000477949 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
USP33-208ENST00000477949 RC3H1Q5TC82 1133 aaKnown RBP10.56□□□□□ -0.72
USP33-208ENST00000477949 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
USP33-208ENST00000477949 LRP5O75197 1615 aa10.55□□□□□ -0.72
USP33-208ENST00000477949 JUNDP17535 347 aa10.55□□□□□ -0.72
USP33-208ENST00000477949 WNT7BP56706 349 aa10.55□□□□□ -0.72
USP33-208ENST00000477949 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
USP33-208ENST00000477949 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
USP33-208ENST00000477949 SETD5Q9C0A6 1442 aa10.55□□□□□ -0.72
USP33-208ENST00000477949 ADGRB3O60242 1522 aa10.54□□□□□ -0.72
USP33-208ENST00000477949 RBM6P78332 1123 aaKnown RBP10.54□□□□□ -0.72
USP33-208ENST00000477949 NHSL1Q5SYE7 1610 aa10.54□□□□□ -0.72
USP33-208ENST00000477949 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
USP33-208ENST00000477949 ZFYVE9O95405 1425 aa10.53□□□□□ -0.72
USP33-208ENST00000477949 SKOR1P84550 965 aa10.53□□□□□ -0.72
USP33-208ENST00000477949 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
USP33-208ENST00000477949 IDI1Q13907 227 aa10.52□□□□□ -0.73
USP33-208ENST00000477949 BRINP3Q76B58 766 aa10.52□□□□□ -0.73
USP33-208ENST00000477949 NOS1P29475 1434 aa10.51□□□□□ -0.73
USP33-208ENST00000477949 FDX1P10109 184 aa10.51□□□□□ -0.73
USP33-208ENST00000477949 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
USP33-208ENST00000477949 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
USP33-208ENST00000477949 ATP13A2Q9NQ11 1180 aa10.51□□□□□ -0.73
USP33-208ENST00000477949 ASXL1Q8IXJ9 1541 aa10.51□□□□□ -0.73
USP33-208ENST00000477949 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 DUOX2Q9NRD8 1548 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
USP33-208ENST00000477949 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
USP33-208ENST00000477949 WFS1O76024 890 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 NUTM2DQ5VT03 806 aaPredicted RBP10.5□□□□□ -0.73
USP33-208ENST00000477949 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
USP33-208ENST00000477949 HPS1Q92902 700 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 PNPLA6Q8IY17 1366 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 PLEKHG1Q9ULL1 1385 aa10.5□□□□□ -0.73
USP33-208ENST00000477949 SENP2Q9HC62 589 aa10.49□□□□□ -0.73
USP33-208ENST00000477949 C6orf229H3BNL8 230 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 TSPY4P0CV99 314 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 TSPY10P0CW01 314 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
USP33-208ENST00000477949 PCDHGC3Q9UN70 934 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 MYO5BQ9ULV0 1848 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 DCCP43146 1447 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 ADAMTS13Q76LX8 1427 aa10.48□□□□□ -0.73
USP33-208ENST00000477949 SPIRE2Q8WWL2 714 aa10.47□□□□□ -0.73
USP33-208ENST00000477949 C8orf37Q96NL8 207 aa10.47□□□□□ -0.73
USP33-208ENST00000477949 C19orf44Q9H6X5 657 aa10.47□□□□□ -0.73
USP33-208ENST00000477949 ALDH1A1P00352 501 aa10.46□□□□□ -0.73
USP33-208ENST00000477949 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
USP33-208ENST00000477949 ATRNO75882 1429 aa10.46□□□□□ -0.74
USP33-208ENST00000477949 MST1RQ04912 1400 aa10.46□□□□□ -0.74
USP33-208ENST00000477949 ERBINQ96RT1 1412 aa10.46□□□□□ -0.74
USP33-208ENST00000477949 LAMC1P11047 1609 aa10.45□□□□□ -0.74
USP33-208ENST00000477949 SIAH2O43255 324 aa10.45□□□□□ -0.74
USP33-208ENST00000477949 MS4A1P11836 297 aa10.45□□□□□ -0.74
USP33-208ENST00000477949 SNRPBP14678 240 aaKnown RBP10.45□□□□□ -0.74
USP33-208ENST00000477949 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
USP33-208ENST00000477949 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
USP33-208ENST00000477949 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
USP33-208ENST00000477949 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
USP33-208ENST00000477949 EHBP1Q8NDI1 1231 aa10.44□□□□□ -0.74
USP33-208ENST00000477949 KIFC2Q96AC6 838 aa10.44□□□□□ -0.74
USP33-208ENST00000477949 NGLY1Q96IV0 654 aa10.44□□□□□ -0.74
USP33-208ENST00000477949 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
USP33-208ENST00000477949 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
USP33-208ENST00000477949 BCL9LQ86UU0 1499 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 RIMS2Q9UQ26 1411 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 PIK3R4Q99570 1358 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 KIF15Q9NS87 1388 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 CCNYL3P0C7X3 344 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 CCDC125Q86Z20 511 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 EVA1BQ9NVM1 165 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 GCC2Q8IWJ2 1684 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 TRPM2O94759 1503 aa10.43□□□□□ -0.74
USP33-208ENST00000477949 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
USP33-208ENST00000477949 ZMYND10O75800 440 aa10.42□□□□□ -0.74
USP33-208ENST00000477949 ATF3P18847 181 aa10.42□□□□□ -0.74
USP33-208ENST00000477949 NDUFV2P19404 249 aa10.42□□□□□ -0.74
USP33-208ENST00000477949 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
USP33-208ENST00000477949 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
USP33-208ENST00000477949 SH3BP2P78314 561 aa10.41□□□□□ -0.74
USP33-208ENST00000477949 AMHR2Q16671 573 aa10.41□□□□□ -0.74
USP33-208ENST00000477949 PTPRNQ16849 979 aa10.41□□□□□ -0.74
USP33-208ENST00000477949 FNBP4Q8N3X1 1017 aaPredicted RBP10.41□□□□□ -0.74
USP33-208ENST00000477949 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
USP33-208ENST00000477949 LRRC59Q96AG4 307 aaKnown RBP10.41□□□□□ -0.74
USP33-208ENST00000477949 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
USP33-208ENST00000477949 TERTO14746 1132 aaKnown RBP10.4□□□□□ -0.74
USP33-208ENST00000477949 WASF2Q9Y6W5 498 aa10.4□□□□□ -0.74
USP33-208ENST00000477949 BLMP54132 1417 aaPredicted RBP10.4□□□□□ -0.75
USP33-208ENST00000477949 COL22A1Q8NFW1 1626 aaPredicted RBP10.4□□□□□ -0.75
USP33-208ENST00000477949 C14orf37Q86TY3 774 aa10.39□□□□□ -0.75
USP33-208ENST00000477949 PRR7Q8TB68 274 aa10.39□□□□□ -0.75
USP33-208ENST00000477949 SLC52A1Q9NWF4 448 aa10.39□□□□□ -0.75
USP33-208ENST00000477949 TRPC5Q9UL62 973 aaPredicted RBP10.39□□□□□ -0.75
USP33-208ENST00000477949 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
USP33-208ENST00000477949 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
USP33-208ENST00000477949 WIPF1O43516 503 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms