RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 FRMPD1Q5SYB0 1578 aa7.92□□□□□ -1.14
CKS1B-207ENST00000477676 SAMD9Q5K651 1589 aa7.91□□□□□ -1.14
CKS1B-207ENST00000477676 SIGLEC1Q9BZZ2 1709 aa7.9□□□□□ -1.14
CKS1B-207ENST00000477676 ARID3CA6NKF2 412 aa7.9□□□□□ -1.14
CKS1B-207ENST00000477676 RTL5Q5HYW3 569 aaPredicted RBP7.9□□□□□ -1.14
CKS1B-207ENST00000477676 INTS6LQ5JSJ4 861 aaKnown RBP7.9□□□□□ -1.14
CKS1B-207ENST00000477676 GALNT6Q8NCL4 622 aa7.9□□□□□ -1.14
CKS1B-207ENST00000477676 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
CKS1B-207ENST00000477676 AK7Q96M32 723 aa7.9□□□□□ -1.14
CKS1B-207ENST00000477676 ARHGAP9Q9BRR9 750 aa7.9□□□□□ -1.14
CKS1B-207ENST00000477676 CDV3Q9UKY7 258 aaKnown RBP7.9□□□□□ -1.14
CKS1B-207ENST00000477676 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
CKS1B-207ENST00000477676 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
CKS1B-207ENST00000477676 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
CKS1B-207ENST00000477676 PDXDC2PQ6P474 469 aa7.89□□□□□ -1.15
CKS1B-207ENST00000477676 NEDD1Q8NHV4 660 aa7.89□□□□□ -1.15
CKS1B-207ENST00000477676 SLC10A4Q96EP9 437 aa7.89□□□□□ -1.15
CKS1B-207ENST00000477676 K7ELQ4 463 aaPredicted RBP7.88□□□□□ -1.15
CKS1B-207ENST00000477676 SLC24A1O60721 1099 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 BCRP11274 1271 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 PODNQ7Z5L7 613 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 MBIPQ9NS73 344 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 RICTORQ6R327 1708 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 RAPGEF6Q8TEU7 1601 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 MADDQ8WXG6 1647 aa7.88□□□□□ -1.15
CKS1B-207ENST00000477676 PTPRMP28827 1452 aa7.87□□□□□ -1.15
CKS1B-207ENST00000477676 RAPGEF3O95398 923 aa7.87□□□□□ -1.15
CKS1B-207ENST00000477676 LYSMD3Q7Z3D4 306 aa7.87□□□□□ -1.15
CKS1B-207ENST00000477676 ZBTB33Q86T24 672 aa7.87□□□□□ -1.15
CKS1B-207ENST00000477676 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
CKS1B-207ENST00000477676 GPR25O00155 361 aa7.86□□□□□ -1.15
CKS1B-207ENST00000477676 ADD1P35611 737 aaKnown RBP7.86□□□□□ -1.15
CKS1B-207ENST00000477676 PTGIRP43119 386 aa7.86□□□□□ -1.15
CKS1B-207ENST00000477676 Q8N3U1 123 aa7.86□□□□□ -1.15
CKS1B-207ENST00000477676 KDF1Q8NAX2 398 aaPredicted RBP7.86□□□□□ -1.15
CKS1B-207ENST00000477676 ACDQ96AP0 544 aa7.86□□□□□ -1.15
CKS1B-207ENST00000477676 ZNF837Q96EG3 531 aaPredicted RBP7.86□□□□□ -1.15
CKS1B-207ENST00000477676 ADH1AP07327 375 aa7.85□□□□□ -1.15
CKS1B-207ENST00000477676 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
CKS1B-207ENST00000477676 TRIM22Q8IYM9 498 aa7.85□□□□□ -1.15
CKS1B-207ENST00000477676 NUP153P49790 1475 aaKnown RBP7.85□□□□□ -1.15
CKS1B-207ENST00000477676 RIMS1Q86UR5 1692 aaKnown RBP7.85□□□□□ -1.15
CKS1B-207ENST00000477676 NEO1Q92859 1461 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 TRIM66O15016 1216 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 RHOQP17081 205 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 CTDSPL2Q05D32 466 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 DBN1Q16643 649 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 FOXR1Q6PIV2 292 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 ZNF784Q8NCA9 323 aaPredicted RBP7.84□□□□□ -1.15
CKS1B-207ENST00000477676 GMCL1Q96IK5 515 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 PSMG3-AS1Q96PY0 264 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
CKS1B-207ENST00000477676 ARHGEF40Q8TER5 1519 aa7.83□□□□□ -1.16
CKS1B-207ENST00000477676 LMTK3Q96Q04 1460 aa7.83□□□□□ -1.16
CKS1B-207ENST00000477676 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.83□□□□□ -1.16
CKS1B-207ENST00000477676 LILRA1O75019 489 aa7.83□□□□□ -1.16
CKS1B-207ENST00000477676 BAG6P46379 1132 aa7.83□□□□□ -1.16
CKS1B-207ENST00000477676 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
CKS1B-207ENST00000477676 PCF11O94913 1555 aaKnown RBP7.83□□□□□ -1.16
CKS1B-207ENST00000477676 TTC37Q6PGP7 1564 aa7.83□□□□□ -1.16
CKS1B-207ENST00000477676 KRTAP9-2Q9BYQ4 174 aa7.82□□□□□ -1.16
CKS1B-207ENST00000477676 PHLDB1Q86UU1 1377 aa7.82□□□□□ -1.16
CKS1B-207ENST00000477676 FHOD3Q2V2M9 1422 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 KRBA1A5PL33 1030 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 FURINP09958 794 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 RAB15P59190 212 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 RIPOR1Q6ZS17 1223 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 FBXO41Q8TF61 875 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 GTPBP3Q969Y2 492 aaKnown RBP7.81□□□□□ -1.16
CKS1B-207ENST00000477676 RSPH6AQ9H0K4 717 aa7.81□□□□□ -1.16
CKS1B-207ENST00000477676 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.81□□□□□ -1.16
CKS1B-207ENST00000477676 ERVH48-1M5A8F1 160 aa7.8□□□□□ -1.16
CKS1B-207ENST00000477676 RNF144AP50876 292 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-207ENST00000477676 ADAM32Q8TC27 787 aa7.8□□□□□ -1.16
CKS1B-207ENST00000477676 LRRN4Q8WUT4 740 aa7.8□□□□□ -1.16
CKS1B-207ENST00000477676 LRRC4BQ9NT99 713 aa7.8□□□□□ -1.16
CKS1B-207ENST00000477676 FER1L4A9Z1Z3 1794 aa7.79□□□□□ -1.16
CKS1B-207ENST00000477676 YEATS2Q9ULM3 1422 aa7.79□□□□□ -1.16
CKS1B-207ENST00000477676 ZMYM4Q5VZL5 1548 aa7.79□□□□□ -1.16
CKS1B-207ENST00000477676 PTK2Q05397 1052 aa7.79□□□□□ -1.16
CKS1B-207ENST00000477676 AKNAQ7Z591 1439 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 CDK13Q14004 1512 aaKnown RBP7.78□□□□□ -1.16
CKS1B-207ENST00000477676 LRRIQ1Q96JM4 1722 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 OIP5O43482 229 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 SNRPNP63162 240 aaKnown RBP7.78□□□□□ -1.16
CKS1B-207ENST00000477676 NR6A1Q15406 480 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 NBPF20Q3BBV1 942 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 DENND4BO75064 1496 aaPredicted RBP7.78□□□□□ -1.16
CKS1B-207ENST00000477676 HECW1Q76N89 1606 aa7.78□□□□□ -1.16
CKS1B-207ENST00000477676 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
CKS1B-207ENST00000477676 CFAP74Q9C0B2 1584 aa7.77□□□□□ -1.17
CKS1B-207ENST00000477676 FANCAO15360 1455 aa7.77□□□□□ -1.17
CKS1B-207ENST00000477676 RANGAP1P46060 587 aaPredicted RBP7.77□□□□□ -1.17
CKS1B-207ENST00000477676 CLK2P49760 499 aaKnown RBP7.77□□□□□ -1.17
CKS1B-207ENST00000477676 HSPA2P54652 639 aa7.77□□□□□ -1.17
CKS1B-207ENST00000477676 STRCQ7RTU9 1775 aa7.76□□□□□ -1.17
CKS1B-207ENST00000477676 H7C1W4 665 aa7.76□□□□□ -1.17
CKS1B-207ENST00000477676 MX2P20592 715 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms