RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
RPSA-206ENST00000477325 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
RPSA-206ENST00000477325 MMP10P09238 476 aa13.5□□□□□ -0.25
RPSA-206ENST00000477325 KCNA3P22001 575 aa13.5□□□□□ -0.25
RPSA-206ENST00000477325 NBPF6Q5VWK0 638 aa13.5□□□□□ -0.25
RPSA-206ENST00000477325 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
RPSA-206ENST00000477325 NBPF4Q96M43 638 aa13.5□□□□□ -0.25
RPSA-206ENST00000477325 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
RPSA-206ENST00000477325 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
RPSA-206ENST00000477325 C4AP0C0L4 1744 aa13.48□□□□□ -0.25
RPSA-206ENST00000477325 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
RPSA-206ENST00000477325 DPEP1P16444 411 aa13.48□□□□□ -0.25
RPSA-206ENST00000477325 FBLN1P23142 703 aa13.48□□□□□ -0.25
RPSA-206ENST00000477325 SMC1BQ8NDV3 1235 aa13.48□□□□□ -0.25
RPSA-206ENST00000477325 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
RPSA-206ENST00000477325 CYP27B1O15528 508 aa13.47□□□□□ -0.25
RPSA-206ENST00000477325 FCHSD2O94868 740 aa13.47□□□□□ -0.25
RPSA-206ENST00000477325 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
RPSA-206ENST00000477325 SMARCC1Q92922 1105 aaPredicted RBP13.47□□□□□ -0.25
RPSA-206ENST00000477325 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
RPSA-206ENST00000477325 TNRC18O15417 2968 aaPredicted RBP13.47□□□□□ -0.25
RPSA-206ENST00000477325 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 ITPK1Q13572 414 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 PIGBQ92521 554 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 DCAF5Q96JK2 942 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
RPSA-206ENST00000477325 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
RPSA-206ENST00000477325 SIK1P57059 783 aa13.45□□□□□ -0.26
RPSA-206ENST00000477325 GNPATO15228 680 aa13.44□□□□□ -0.26
RPSA-206ENST00000477325 RNF181Q9P0P0 153 aa13.44□□□□□ -0.26
RPSA-206ENST00000477325 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
RPSA-206ENST00000477325 KDM6AO15550 1401 aaPredicted RBP13.43□□□□□ -0.26
RPSA-206ENST00000477325 HDGFL2Q7Z4V5 671 aaPredicted RBP13.43□□□□□ -0.26
RPSA-206ENST00000477325 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
RPSA-206ENST00000477325 AMPHP49418 695 aa13.42□□□□□ -0.26
RPSA-206ENST00000477325 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
RPSA-206ENST00000477325 POTEHQ6S545 545 aa13.42□□□□□ -0.26
RPSA-206ENST00000477325 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
RPSA-206ENST00000477325 TATP17735 454 aaPredicted RBP13.41□□□□□ -0.26
RPSA-206ENST00000477325 TMF1P82094 1093 aa13.41□□□□□ -0.26
RPSA-206ENST00000477325 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
RPSA-206ENST00000477325 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
RPSA-206ENST00000477325 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
RPSA-206ENST00000477325 ZNF831Q5JPB2 1677 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 COL5A3P25940 1745 aaPredicted RBP13.4□□□□□ -0.26
RPSA-206ENST00000477325 FOXN1O15353 648 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 GYS1P13807 737 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 CCDC87Q9NVE4 849 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 ASAP1Q9ULH1 1129 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 KDRP35968 1356 aa13.4□□□□□ -0.26
RPSA-206ENST00000477325 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
RPSA-206ENST00000477325 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
RPSA-206ENST00000477325 POTECB2RU33 542 aa13.39□□□□□ -0.27
RPSA-206ENST00000477325 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
RPSA-206ENST00000477325 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
RPSA-206ENST00000477325 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
RPSA-206ENST00000477325 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
RPSA-206ENST00000477325 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
RPSA-206ENST00000477325 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
RPSA-206ENST00000477325 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
RPSA-206ENST00000477325 COG3Q96JB2 828 aa13.38□□□□□ -0.27
RPSA-206ENST00000477325 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
RPSA-206ENST00000477325 INSRP06213 1382 aa13.37□□□□□ -0.27
RPSA-206ENST00000477325 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
RPSA-206ENST00000477325 GLTPD2A6NH11 291 aa13.37□□□□□ -0.27
RPSA-206ENST00000477325 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
RPSA-206ENST00000477325 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
RPSA-206ENST00000477325 TRAPPC3LQ5T215 181 aa13.37□□□□□ -0.27
RPSA-206ENST00000477325 RASSF7Q02833 373 aa13.36□□□□□ -0.27
RPSA-206ENST00000477325 HSP90AB2PQ58FF8 381 aa13.36□□□□□ -0.27
RPSA-206ENST00000477325 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
RPSA-206ENST00000477325 RTCBQ9Y3I0 505 aaKnown RBP13.36□□□□□ -0.27
RPSA-206ENST00000477325 SMG6Q86US8 1419 aaKnown RBP13.36□□□□□ -0.27
RPSA-206ENST00000477325 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
RPSA-206ENST00000477325 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
RPSA-206ENST00000477325 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
RPSA-206ENST00000477325 PARP3Q9Y6F1 533 aa13.35□□□□□ -0.27
RPSA-206ENST00000477325 CHRNA5P30532 468 aa13.34□□□□□ -0.27
RPSA-206ENST00000477325 DDR1Q08345 913 aa13.34□□□□□ -0.27
RPSA-206ENST00000477325 RC3H1Q5TC82 1133 aaKnown RBP13.34□□□□□ -0.27
RPSA-206ENST00000477325 CHRDL2Q6WN34 429 aa13.34□□□□□ -0.27
RPSA-206ENST00000477325 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
RPSA-206ENST00000477325 VIRMAQ69YN4 1812 aaKnown RBP13.34□□□□□ -0.27
RPSA-206ENST00000477325 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
RPSA-206ENST00000477325 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
RPSA-206ENST00000477325 ADAMTS7Q9UKP4 1686 aa13.33□□□□□ -0.28
RPSA-206ENST00000477325 CNTNAP4Q9C0A0 1308 aa13.33□□□□□ -0.28
RPSA-206ENST00000477325 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 SPDYE2BA6NHP3 402 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 RPS6KA4O75676 772 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 SPDYE6P0CI01 402 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 SPDYE2Q495Y8 402 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 FLT4P35916 1363 aa13.32□□□□□ -0.28
RPSA-206ENST00000477325 FYB1O15117 783 aa13.31□□□□□ -0.28
RPSA-206ENST00000477325 LMNB1P20700 586 aa13.31□□□□□ -0.28
RPSA-206ENST00000477325 RGS19P49795 217 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms