RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
RPSA-206ENST00000477325 AEBP2Q6ZN18 517 aaPredicted RBP24.26■■□□□ 1.47
RPSA-206ENST00000477325 CHIC1Q5VXU3 224 aa23.21■■□□□ 1.31
RPSA-206ENST00000477325 ABCC9O60706 1549 aa23■■□□□ 1.27
RPSA-206ENST00000477325 CCDC180Q9P1Z9 1646 aa22.42■■□□□ 1.18
RPSA-206ENST00000477325 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
RPSA-206ENST00000477325 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
RPSA-206ENST00000477325 NACADO15069 1562 aa21.32■■□□□ 1
RPSA-206ENST00000477325 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
RPSA-206ENST00000477325 UNC13AQ9UPW8 1703 aa21.21■□□□□ 0.99
RPSA-206ENST00000477325 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
RPSA-206ENST00000477325 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
RPSA-206ENST00000477325 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
RPSA-206ENST00000477325 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
RPSA-206ENST00000477325 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
RPSA-206ENST00000477325 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
RPSA-206ENST00000477325 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
RPSA-206ENST00000477325 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
RPSA-206ENST00000477325 EIF4G1Q04637 1599 aaKnown RBP20.59■□□□□ 0.89
RPSA-206ENST00000477325 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
RPSA-206ENST00000477325 DCAF1Q9Y4B6 1507 aa20.36■□□□□ 0.85
RPSA-206ENST00000477325 SCRIBQ14160 1630 aa20.35■□□□□ 0.85
RPSA-206ENST00000477325 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
RPSA-206ENST00000477325 CUX2O14529 1486 aa20.1■□□□□ 0.81
RPSA-206ENST00000477325 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
RPSA-206ENST00000477325 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
RPSA-206ENST00000477325 NESP48681 1621 aa19.62■□□□□ 0.73
RPSA-206ENST00000477325 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
RPSA-206ENST00000477325 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
RPSA-206ENST00000477325 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
RPSA-206ENST00000477325 HMGXB3Q12766 1538 aa19.51■□□□□ 0.71
RPSA-206ENST00000477325 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
RPSA-206ENST00000477325 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
RPSA-206ENST00000477325 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
RPSA-206ENST00000477325 KIF21AQ7Z4S6 1674 aa19.34■□□□□ 0.69
RPSA-206ENST00000477325 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
RPSA-206ENST00000477325 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
RPSA-206ENST00000477325 PDS5BQ9NTI5 1447 aa19.22■□□□□ 0.67
RPSA-206ENST00000477325 FOXD1Q16676 465 aa19.21■□□□□ 0.67
RPSA-206ENST00000477325 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
RPSA-206ENST00000477325 WDR62O43379 1518 aa19.14■□□□□ 0.65
RPSA-206ENST00000477325 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
RPSA-206ENST00000477325 CADPSQ9ULU8 1353 aa19.05■□□□□ 0.64
RPSA-206ENST00000477325 OSCARQ8IYS5 282 aa19.01■□□□□ 0.63
RPSA-206ENST00000477325 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
RPSA-206ENST00000477325 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
RPSA-206ENST00000477325 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
RPSA-206ENST00000477325 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
RPSA-206ENST00000477325 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
RPSA-206ENST00000477325 FANCD2Q9BXW9 1451 aa18.84■□□□□ 0.61
RPSA-206ENST00000477325 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
RPSA-206ENST00000477325 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
RPSA-206ENST00000477325 WIZO95785 1651 aa18.73■□□□□ 0.59
RPSA-206ENST00000477325 CFTRP13569 1480 aa18.73■□□□□ 0.59
RPSA-206ENST00000477325 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
RPSA-206ENST00000477325 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
RPSA-206ENST00000477325 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
RPSA-206ENST00000477325 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
RPSA-206ENST00000477325 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
RPSA-206ENST00000477325 TRHP20396 242 aaPredicted RBP18.55■□□□□ 0.56
RPSA-206ENST00000477325 EIF4G3O43432 1585 aaKnown RBP18.49■□□□□ 0.55
RPSA-206ENST00000477325 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
RPSA-206ENST00000477325 CHD1O14646 1710 aa18.47■□□□□ 0.55
RPSA-206ENST00000477325 RSF1Q96T23 1441 aaPredicted RBP18.44■□□□□ 0.54
RPSA-206ENST00000477325 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
RPSA-206ENST00000477325 TOPBP1Q92547 1522 aa18.43■□□□□ 0.54
RPSA-206ENST00000477325 TARBP1Q13395 1621 aaKnown RBP18.35■□□□□ 0.53
RPSA-206ENST00000477325 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53not detected■■■■■ 39.4
RPSA-206ENST00000477325 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
RPSA-206ENST00000477325 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
RPSA-206ENST00000477325 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
RPSA-206ENST00000477325 FBLN2P98095 1184 aa18.24■□□□□ 0.51
RPSA-206ENST00000477325 CCDC88BA6NC98 1476 aa18.24■□□□□ 0.51
RPSA-206ENST00000477325 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
RPSA-206ENST00000477325 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
RPSA-206ENST00000477325 ADRA2BP18089 450 aa18.14■□□□□ 0.49
RPSA-206ENST00000477325 SNAPC4Q5SXM2 1469 aa18.14■□□□□ 0.49
RPSA-206ENST00000477325 RAD54L2Q9Y4B4 1467 aa18.14■□□□□ 0.49
RPSA-206ENST00000477325 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
RPSA-206ENST00000477325 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
RPSA-206ENST00000477325 WDR97A6NE52 1622 aa18.08■□□□□ 0.48
RPSA-206ENST00000477325 GAPVD1Q14C86 1478 aa18.07■□□□□ 0.48
RPSA-206ENST00000477325 MAGI1Q96QZ7 1491 aaPredicted RBP18.07■□□□□ 0.48
RPSA-206ENST00000477325 SOGA1O94964 1423 aa18.06■□□□□ 0.48
RPSA-206ENST00000477325 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
RPSA-206ENST00000477325 CHMP7Q8WUX9 453 aaPredicted RBP18.03■□□□□ 0.48
RPSA-206ENST00000477325 SYNJ2O15056 1496 aa18.01■□□□□ 0.47
RPSA-206ENST00000477325 GRIN2BQ13224 1484 aa17.99■□□□□ 0.47
RPSA-206ENST00000477325 FGD5Q6ZNL6 1462 aa17.97■□□□□ 0.47
RPSA-206ENST00000477325 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
RPSA-206ENST00000477325 KIF13AQ9H1H9 1805 aa17.92■□□□□ 0.46
RPSA-206ENST00000477325 PBRM1Q86U86 1689 aa17.9■□□□□ 0.46
RPSA-206ENST00000477325 CUX1P39880 1505 aa17.89■□□□□ 0.45
RPSA-206ENST00000477325 ILDR1Q86SU0 546 aaPredicted RBP17.86■□□□□ 0.45
RPSA-206ENST00000477325 MSH5O43196 834 aa17.85■□□□□ 0.45
RPSA-206ENST00000477325 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
RPSA-206ENST00000477325 ABCA5Q8WWZ7 1642 aa17.81■□□□□ 0.44
RPSA-206ENST00000477325 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
RPSA-206ENST00000477325 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
RPSA-206ENST00000477325 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms