RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
SREBF1-211ENST00000476994 MAP3K5Q99683 1374 aa23.34■■□□□ 1.33
SREBF1-211ENST00000476994 C5P01031 1676 aa23.34■■□□□ 1.33
SREBF1-211ENST00000476994 ADAMTS7Q9UKP4 1686 aa23.34■■□□□ 1.33
SREBF1-211ENST00000476994 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.33
SREBF1-211ENST00000476994 MSH5O43196 834 aa23.33■■□□□ 1.33
SREBF1-211ENST00000476994 KCNQ4P56696 695 aa23.33■■□□□ 1.33
SREBF1-211ENST00000476994 KLHL34Q8N239 644 aa23.33■■□□□ 1.33
SREBF1-211ENST00000476994 COL24A1Q17RW2 1714 aa23.33■■□□□ 1.32
SREBF1-211ENST00000476994 SCN11AQ9UI33 1791 aa23.32■■□□□ 1.32
SREBF1-211ENST00000476994 SPG7Q9UQ90 795 aa23.31■■□□□ 1.32
SREBF1-211ENST00000476994 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
SREBF1-211ENST00000476994 APAF1O14727 1248 aa23.3■■□□□ 1.32
SREBF1-211ENST00000476994 MTHFSDQ2M296 383 aaKnown RBP23.3■■□□□ 1.32
SREBF1-211ENST00000476994 MPRIPQ6WCQ1 1025 aa23.3■■□□□ 1.32
SREBF1-211ENST00000476994 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.3■■□□□ 1.32
SREBF1-211ENST00000476994 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-211ENST00000476994 MAPK8IP3Q9UPT6 1336 aa23.29■■□□□ 1.32
SREBF1-211ENST00000476994 TMPOP42166 694 aaKnown RBP23.28■■□□□ 1.32
SREBF1-211ENST00000476994 NFE2L2Q16236 605 aa23.28■■□□□ 1.32
SREBF1-211ENST00000476994 GPR162Q16538 588 aa23.28■■□□□ 1.32
SREBF1-211ENST00000476994 PALLDQ8WX93 1383 aa23.27■■□□□ 1.32
SREBF1-211ENST00000476994 TOGARAM1Q9Y4F4 1720 aa23.27■■□□□ 1.32
SREBF1-211ENST00000476994 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
SREBF1-211ENST00000476994 CYP27B1O15528 508 aa23.26■■□□□ 1.31
SREBF1-211ENST00000476994 AMOTQ4VCS5 1084 aa23.26■■□□□ 1.31
SREBF1-211ENST00000476994 NCBP3Q53F19 620 aaKnown RBP23.26■■□□□ 1.31
SREBF1-211ENST00000476994 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
SREBF1-211ENST00000476994 FLAD1Q8NFF5 587 aa23.26■■□□□ 1.31
SREBF1-211ENST00000476994 UTRNP46939 3433 aa23.26■■□□□ 1.31
SREBF1-211ENST00000476994 GAS2L2Q8NHY3 880 aa23.25■■□□□ 1.31
SREBF1-211ENST00000476994 SENP3-EIF4A1A0A087X0R7 540 aa23.24■■□□□ 1.31
SREBF1-211ENST00000476994 RRP7AQ9Y3A4 280 aaKnown RBP23.24■■□□□ 1.31
SREBF1-211ENST00000476994 PELP1Q8IZL8 1130 aaKnown RBP23.23■■□□□ 1.31
SREBF1-211ENST00000476994 NEFMP07197 916 aa23.22■■□□□ 1.31
SREBF1-211ENST00000476994 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-211ENST00000476994 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
SREBF1-211ENST00000476994 TRIM35Q9UPQ4 493 aa23.22■■□□□ 1.31
SREBF1-211ENST00000476994 AK7Q96M32 723 aa23.21■■□□□ 1.31
SREBF1-211ENST00000476994 ZNF521Q96K83 1311 aa23.21■■□□□ 1.31
SREBF1-211ENST00000476994 KDM6AO15550 1401 aaPredicted RBP23.21■■□□□ 1.31
SREBF1-211ENST00000476994 C4BP0C0L5 1744 aa23.21■■□□□ 1.31
SREBF1-211ENST00000476994 PHKG2P15735 406 aa23.2■■□□□ 1.3
SREBF1-211ENST00000476994 RIPK4P57078 832 aa23.2■■□□□ 1.3
SREBF1-211ENST00000476994 HNRNPUQ00839 825 aaKnown RBP eCLIP23.2■■□□□ 1.33e-6■■■■□ 20.1
SREBF1-211ENST00000476994 NKX1-1Q15270 411 aaPredicted RBP23.2■■□□□ 1.3
SREBF1-211ENST00000476994 CCDC27Q2M243 656 aa23.2■■□□□ 1.3
SREBF1-211ENST00000476994 IFNL2Q8IZJ0 200 aa23.2■■□□□ 1.3
SREBF1-211ENST00000476994 NGEFQ8N5V2 710 aa23.2■■□□□ 1.3
SREBF1-211ENST00000476994 TMOD3Q9NYL9 352 aa23.2■■□□□ 1.3
SREBF1-211ENST00000476994 AKAP4Q5JQC9 854 aa23.19■■□□□ 1.3
SREBF1-211ENST00000476994 ZNF784Q8NCA9 323 aaPredicted RBP23.18■■□□□ 1.3
SREBF1-211ENST00000476994 MRC1P22897 1456 aa23.17■■□□□ 1.3
SREBF1-211ENST00000476994 CEMIPQ8WUJ3 1361 aa23.17■■□□□ 1.3
SREBF1-211ENST00000476994 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
SREBF1-211ENST00000476994 PIGBQ92521 554 aa23.17■■□□□ 1.3
SREBF1-211ENST00000476994 UBR3Q6ZT12 1888 aa23.17■■□□□ 1.3
SREBF1-211ENST00000476994 ZBED9Q6R2W3 1325 aa23.16■■□□□ 1.3
SREBF1-211ENST00000476994 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
SREBF1-211ENST00000476994 HTATSF1O43719 755 aaKnown RBP23.16■■□□□ 1.3
SREBF1-211ENST00000476994 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
SREBF1-211ENST00000476994 WWC1Q8IX03 1113 aa23.16■■□□□ 1.3
SREBF1-211ENST00000476994 IL17REQ8NFR9 667 aa23.15■■□□□ 1.3
SREBF1-211ENST00000476994 SALL2Q9Y467 1007 aaPredicted RBP23.14■■□□□ 1.29
SREBF1-211ENST00000476994 KDM3BQ7LBC6 1761 aa23.14■■□□□ 1.29
SREBF1-211ENST00000476994 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
SREBF1-211ENST00000476994 GRIN3BO60391 1043 aa23.13■■□□□ 1.29
SREBF1-211ENST00000476994 HSP90AB1P08238 724 aaKnown RBP23.13■■□□□ 1.29
SREBF1-211ENST00000476994 SIK1P57059 783 aa23.13■■□□□ 1.29
SREBF1-211ENST00000476994 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
SREBF1-211ENST00000476994 C1orf141Q5JVX7 400 aa23.13■■□□□ 1.29
SREBF1-211ENST00000476994 NLGN2Q8NFZ4 835 aa23.13■■□□□ 1.29
SREBF1-211ENST00000476994 LMOD3Q0VAK6 560 aa23.12■■□□□ 1.29
SREBF1-211ENST00000476994 YTHDC1Q96MU7 727 aaKnown RBP23.12■■□□□ 1.29
SREBF1-211ENST00000476994 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
SREBF1-211ENST00000476994 RNMTO43148 476 aaKnown RBP23.11■■□□□ 1.29
SREBF1-211ENST00000476994 PHF14O94880 888 aa23.11■■□□□ 1.29
SREBF1-211ENST00000476994 MCM10Q7L590 875 aa23.11■■□□□ 1.29
SREBF1-211ENST00000476994 THUMPD2Q9BTF0 503 aaKnown RBP23.11■■□□□ 1.29
SREBF1-211ENST00000476994 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
SREBF1-211ENST00000476994 CD2APQ9Y5K6 639 aa23.11■■□□□ 1.29
SREBF1-211ENST00000476994 SSFA2P28290 1259 aa23.1■■□□□ 1.29
SREBF1-211ENST00000476994 ATP6V1AP38606 617 aa23.1■■□□□ 1.29
SREBF1-211ENST00000476994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.09■■□□□ 1.29
SREBF1-211ENST00000476994 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
SREBF1-211ENST00000476994 WDR63Q8IWG1 891 aa23.08■■□□□ 1.29
SREBF1-211ENST00000476994 ASAP1Q9ULH1 1129 aa23.08■■□□□ 1.29
SREBF1-211ENST00000476994 UBR2Q8IWV8 1755 aa23.07■■□□□ 1.28
SREBF1-211ENST00000476994 ERVV-2B6SEH9 535 aa23.07■■□□□ 1.28
SREBF1-211ENST00000476994 RTF1Q92541 710 aaKnown RBP23.07■■□□□ 1.28
SREBF1-211ENST00000476994 GNPATO15228 680 aa23.06■■□□□ 1.28
SREBF1-211ENST00000476994 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
SREBF1-211ENST00000476994 SPINK5Q9NQ38 1064 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-211ENST00000476994 IL16Q14005 1332 aa23.06■■□□□ 1.28
SREBF1-211ENST00000476994 ZNF831Q5JPB2 1677 aa23.04■■□□□ 1.28
SREBF1-211ENST00000476994 ZNF853P0CG23 659 aa23.04■■□□□ 1.28
SREBF1-211ENST00000476994 ATG3Q9NT62 314 aa23.04■■□□□ 1.28
SREBF1-211ENST00000476994 CABP4P57796 275 aa23.03■■□□□ 1.28
SREBF1-211ENST00000476994 CDCA7LQ96GN5 454 aa23.02■■□□□ 1.28
SREBF1-211ENST00000476994 RBM42Q9BTD8 480 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms