RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
RNF220-211ENST00000474956 PXDNQ92626 1479 aa15.44■□□□□ 0.06
RNF220-211ENST00000474956 XRCC6P12956 609 aaKnown RBP eCLIP15.44■□□□□ 0.06
RNF220-211ENST00000474956 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
RNF220-211ENST00000474956 RRAGDQ9NQL2 400 aaPredicted RBP15.44■□□□□ 0.06
RNF220-211ENST00000474956 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
RNF220-211ENST00000474956 CABLES1Q8TDN4 633 aa15.43■□□□□ 0.06
RNF220-211ENST00000474956 KIF2CQ99661 725 aa15.43■□□□□ 0.06
RNF220-211ENST00000474956 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
RNF220-211ENST00000474956 STK31Q9BXU1 1019 aa15.43■□□□□ 0.06
RNF220-211ENST00000474956 HSCBQ8IWL3 235 aa15.42■□□□□ 0.06
RNF220-211ENST00000474956 FAM208AQ9UK61 1670 aaKnown RBP15.42■□□□□ 0.06
RNF220-211ENST00000474956 TRAK2O60296 914 aa15.42■□□□□ 0.06
RNF220-211ENST00000474956 HSPA2P54652 639 aa15.42■□□□□ 0.06
RNF220-211ENST00000474956 HDGFL1Q5TGJ6 251 aa15.42■□□□□ 0.06
RNF220-211ENST00000474956 ZNF530Q6P9A1 599 aaPredicted RBP15.42■□□□□ 0.06
RNF220-211ENST00000474956 CHMP4BQ9H444 224 aaKnown RBP15.41■□□□□ 0.06
RNF220-211ENST00000474956 USP54Q70EL1 1684 aa15.41■□□□□ 0.06
RNF220-211ENST00000474956 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
RNF220-211ENST00000474956 RGPD5Q99666 1765 aa15.41■□□□□ 0.06
RNF220-211ENST00000474956 ARHGEF25Q86VW2 580 aa15.4■□□□□ 0.06
RNF220-211ENST00000474956 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
RNF220-211ENST00000474956 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
RNF220-211ENST00000474956 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
RNF220-211ENST00000474956 CHPF2Q9P2E5 772 aa15.4■□□□□ 0.06
RNF220-211ENST00000474956 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
RNF220-211ENST00000474956 TTC22Q5TAA0 569 aa15.4■□□□□ 0.06
RNF220-211ENST00000474956 GZF1Q9H116 711 aaPredicted RBP15.4■□□□□ 0.06
RNF220-211ENST00000474956 RPAP2Q8IXW5 612 aaPredicted RBP15.39■□□□□ 0.05
RNF220-211ENST00000474956 UBE2Q2Q8WVN8 375 aa15.39■□□□□ 0.05
RNF220-211ENST00000474956 KIF24Q5T7B8 1368 aa15.39■□□□□ 0.05
RNF220-211ENST00000474956 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
RNF220-211ENST00000474956 SDSP20132 328 aa15.38■□□□□ 0.05
RNF220-211ENST00000474956 MRE11P49959 708 aa15.38■□□□□ 0.05
RNF220-211ENST00000474956 ARXQ96QS3 562 aa15.38■□□□□ 0.05
RNF220-211ENST00000474956 HAP1P54257 671 aaPredicted RBP15.38■□□□□ 0.05
RNF220-211ENST00000474956 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
RNF220-211ENST00000474956 PROSER3Q2NL68 480 aa15.38■□□□□ 0.05
RNF220-211ENST00000474956 CEMIPQ8WUJ3 1361 aa15.38■□□□□ 0.05
RNF220-211ENST00000474956 NCOA3Q9Y6Q9 1424 aa15.38■□□□□ 0.05
RNF220-211ENST00000474956 RBM25P49756 843 aaKnown RBP15.38■□□□□ 0.05
RNF220-211ENST00000474956 ISY1Q9ULR0 285 aaKnown RBP15.38■□□□□ 0.05
RNF220-211ENST00000474956 SNX21Q969T3 373 aa15.37■□□□□ 0.05
RNF220-211ENST00000474956 USP44Q9H0E7 712 aa15.37■□□□□ 0.05
RNF220-211ENST00000474956 CCT4P50991 539 aaKnown RBP15.37■□□□□ 0.05
RNF220-211ENST00000474956 CHRNA2Q15822 529 aa15.37■□□□□ 0.05
RNF220-211ENST00000474956 KCNH5Q8NCM2 988 aa15.37■□□□□ 0.05
RNF220-211ENST00000474956 BTBD11A6QL63 1104 aa15.36■□□□□ 0.05
RNF220-211ENST00000474956 GNAI2P04899 355 aa15.36■□□□□ 0.05
RNF220-211ENST00000474956 PANK2Q9BZ23 570 aa15.36■□□□□ 0.05
RNF220-211ENST00000474956 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
RNF220-211ENST00000474956 CDC45O75419 566 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 NBPF7P0C2Y1 421 aaPredicted RBP15.35■□□□□ 0.05
RNF220-211ENST00000474956 DDIT3P35638 169 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 STRCP1A6NGW2 1772 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 CLCN1P35523 988 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 TEFQ10587 303 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 SLC39A6Q13433 755 aa15.35■□□□□ 0.05
RNF220-211ENST00000474956 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
RNF220-211ENST00000474956 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
RNF220-211ENST00000474956 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
RNF220-211ENST00000474956 TMEM94Q12767 1356 aa15.34■□□□□ 0.05
RNF220-211ENST00000474956 TRPM3Q9HCF6 1732 aaPredicted RBP15.33■□□□□ 0.05
RNF220-211ENST00000474956 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
RNF220-211ENST00000474956 PIP4K2AP48426 406 aaPredicted RBP15.33■□□□□ 0.04
RNF220-211ENST00000474956 C19orf44Q9H6X5 657 aa15.33■□□□□ 0.04
RNF220-211ENST00000474956 GRPEL1Q9HAV7 217 aa15.33■□□□□ 0.04
RNF220-211ENST00000474956 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
RNF220-211ENST00000474956 PDE1AP54750 535 aa15.32■□□□□ 0.04
RNF220-211ENST00000474956 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
RNF220-211ENST00000474956 UNC5CLQ8IV45 518 aa15.32■□□□□ 0.04
RNF220-211ENST00000474956 NLRP2Q9NX02 1062 aa15.32■□□□□ 0.04
RNF220-211ENST00000474956 MAP4K4O95819 1239 aaPredicted RBP15.32■□□□□ 0.04
RNF220-211ENST00000474956 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
RNF220-211ENST00000474956 GBP4Q96PP9 640 aa15.31■□□□□ 0.04
RNF220-211ENST00000474956 C1orf141Q5JVX7 400 aa15.31■□□□□ 0.04
RNF220-211ENST00000474956 SLIT3O75094 1523 aa15.31■□□□□ 0.04
RNF220-211ENST00000474956 AK9Q5TCS8 1911 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 HSP90AB1P08238 724 aaKnown RBP15.3■□□□□ 0.04
RNF220-211ENST00000474956 UBTFL1P0CB47 393 aaPredicted RBP15.3■□□□□ 0.04
RNF220-211ENST00000474956 PTMSP20962 102 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 NUTM1Q86Y26 1132 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 ERBB3P21860 1342 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 KDM3BQ7LBC6 1761 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 HMMRO75330 724 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 AIMP1Q12904 312 aaKnown RBP15.3■□□□□ 0.04
RNF220-211ENST00000474956 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
RNF220-211ENST00000474956 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
RNF220-211ENST00000474956 TNPO1Q92973 898 aaKnown RBP15.3■□□□□ 0.04
RNF220-211ENST00000474956 ADCY9O60503 1353 aa15.29■□□□□ 0.04
RNF220-211ENST00000474956 SKOR2Q2VWA4 1001 aaPredicted RBP15.29■□□□□ 0.04
RNF220-211ENST00000474956 ATF3P18847 181 aa15.29■□□□□ 0.04
RNF220-211ENST00000474956 USP26Q9BXU7 913 aa15.29■□□□□ 0.04
RNF220-211ENST00000474956 IL25Q9H293 177 aa15.29■□□□□ 0.04
RNF220-211ENST00000474956 LMO7Q8WWI1 1683 aa15.29■□□□□ 0.04
RNF220-211ENST00000474956 MST1RQ04912 1400 aa15.28■□□□□ 0.04
RNF220-211ENST00000474956 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
RNF220-211ENST00000474956 BEND3Q5T5X7 828 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms