RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NOP58Q9Y2X3 529 aaKnown RBP7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 SEMA3EO15041 775 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 RRP9O43818 475 aaKnown RBP7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 DSG2Q14126 1118 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 TMC2Q8TDI7 906 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 MIA2Q96PC5 1412 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 PAX3P23760 479 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 MAMSTRQ6ZN01 415 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 UNC5CLQ8IV45 518 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 OTUD6BQ8N6M0 293 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 AIDAQ96BJ3 306 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 TMEM121BQ9BXQ6 578 aaPredicted RBP7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 JADE2Q9NQC1 790 aa7.78□□□□□ -1.16
SMARCE1-208ENST00000474246 POTEFA5A3E0 1075 aa7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 SSFA2P28290 1259 aa7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 HABP4Q5JVS0 413 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 SLC39A7Q92504 469 aa7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 CCDC85AQ96PX6 553 aaPredicted RBP7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 KLHL42Q9P2K6 505 aa7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 EID1Q9Y6B2 187 aa7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 GLI3P10071 1580 aa7.77□□□□□ -1.17
SMARCE1-208ENST00000474246 KIF4AO95239 1232 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 HDAC1Q13547 482 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 MKL1Q969V6 931 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 METRNQ9UJH8 293 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 CARMIL1Q5VZK9 1371 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 CCDC194A0A1B0GVG4 234 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 C2orf72A6NCS6 295 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 APBA3O96018 575 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 IRX3P78415 501 aaPredicted RBP7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 PDE4DQ08499 809 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 CAMK2BQ13554 666 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 ZNF280DQ6N043 979 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 IVNS1ABPQ9Y6Y0 642 aa7.76□□□□□ -1.17
SMARCE1-208ENST00000474246 POLD1P28340 1107 aa7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 ARMCX6Q7L4S7 300 aa7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 L3MBTL3Q96JM7 780 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 FEZ2Q9UHY8 353 aaPredicted RBP7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 EPB41L2O43491 1005 aaKnown RBP7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 NBPF9Q3BBW0 867 aa7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 PMM1Q92871 262 aa7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 SPOCK3Q9BQ16 436 aa7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 COMMD10Q9Y6G5 202 aa7.75□□□□□ -1.17
SMARCE1-208ENST00000474246 ARHGAP35Q9NRY4 1499 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 ABCC5O15440 1437 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 FOXN1O15353 648 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 ZBTB7AO95365 584 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 C7P10643 843 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 MCM6Q14566 821 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 TMEM92Q6UXU6 159 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 PDE4DIPQ5VU43 2346 aa7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.74□□□□□ -1.17
SMARCE1-208ENST00000474246 PARNO95453 639 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 SF3A1Q15459 793 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 CSPP1Q1MSJ5 1256 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 GGT6Q6P531 493 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 EGFL6Q8IUX8 553 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 C16orf71Q8IYS4 520 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 C19orf44Q9H6X5 657 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 EMILIN3Q9NT22 766 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 DHX57Q6P158 1386 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 RREB1Q92766 1687 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 ZC3H6P61129 1189 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 FOXK1P85037 733 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 FBXO31Q5XUX0 539 aaPredicted RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 PLPP6Q8IY26 295 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 MSL3Q8N5Y2 521 aaKnown RBP7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 FRMD4BQ9Y2L6 1034 aa7.73□□□□□ -1.17
SMARCE1-208ENST00000474246 PZPP20742 1482 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 PLEKHG3A1L390 1219 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 DPYSL4O14531 572 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 U2SURPO15042 1029 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 NUP188Q5SRE5 1749 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 A0A0G2JS52 829 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 TRIM66O15016 1216 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 RHBDL3P58872 404 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 CC2D1BQ5T0F9 858 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 KRI1Q8N9T8 703 aaKnown RBP7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 HELBQ8NG08 1087 aaPredicted RBP7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 VTI1AQ96AJ9 217 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 CARD10Q9BWT7 1032 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 MTFR1LQ9H019 292 aa7.72□□□□□ -1.17
SMARCE1-208ENST00000474246 TNS1Q9HBL0 1735 aaKnown RBP7.71□□□□□ -1.17
SMARCE1-208ENST00000474246 DHX16O60231 1041 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 AMOTL1Q8IY63 956 aa7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 GPATCH3Q96I76 525 aa7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 SAMD9LQ8IVG5 1584 aa7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 EFCAB6Q5THR3 1501 aa7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 ASXL1Q8IXJ9 1541 aa7.71□□□□□ -1.18
SMARCE1-208ENST00000474246 GOLGA6CA6NDK9 693 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 GOLGA6BA6NDN3 693 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 GOLGA6DP0CG33 693 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 COPB2P35606 906 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 ZKSCAN2Q63HK3 967 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 PNISRQ8TF01 805 aaKnown RBP7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 GOLGA6AQ9NYA3 693 aa7.7□□□□□ -1.18
SMARCE1-208ENST00000474246 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms