RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 FAM229AH3BQW9 127 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 ARAFP10398 606 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 GPC1P35052 558 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 DIXDC1Q155Q3 683 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 MYSM1Q5VVJ2 828 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 NBPF10Q6P3W6 841 aaKnown RBP3.55□□□□□ -1.84
UBXN4-207ENST00000471246 NBPF15Q8N660 670 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 GPBP1L1Q9HC44 474 aaPredicted RBP3.55□□□□□ -1.84
UBXN4-207ENST00000471246 PCMTD2Q9NV79 361 aa3.55□□□□□ -1.84
UBXN4-207ENST00000471246 OAS3Q9Y6K5 1087 aaKnown RBP3.55□□□□□ -1.84
UBXN4-207ENST00000471246 GJA5P36382 358 aa3.54□□□□□ -1.84
UBXN4-207ENST00000471246 PRRT3Q5FWE3 981 aa3.54□□□□□ -1.84
UBXN4-207ENST00000471246 KDM4CQ9H3R0 1056 aa3.54□□□□□ -1.84
UBXN4-207ENST00000471246 TIMMDC1Q9NPL8 285 aa3.54□□□□□ -1.84
UBXN4-207ENST00000471246 LIMD1Q9UGP4 676 aa3.54□□□□□ -1.84
UBXN4-207ENST00000471246 KLF15Q9UIH9 416 aa3.54□□□□□ -1.84
UBXN4-207ENST00000471246 FGFR3P22607 806 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 CLK2P49760 499 aaKnown RBP3.53□□□□□ -1.84
UBXN4-207ENST00000471246 GRIK4Q16099 956 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 CSPP1Q1MSJ5 1256 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 CABLES1Q8TDN4 633 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 SLC10A4Q96EP9 437 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 ABHD17AQ96GS6 310 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 GRIP2Q9C0E4 1043 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 ZBTB3Q9H5J0 574 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 NDFIP2Q9NV92 336 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 CDV3Q9UKY7 258 aaKnown RBP3.53□□□□□ -1.84
UBXN4-207ENST00000471246 ATXN7L1Q9ULK2 861 aaPredicted RBP3.53□□□□□ -1.84
UBXN4-207ENST00000471246 PCDHB15Q9Y5E8 787 aa3.53□□□□□ -1.84
UBXN4-207ENST00000471246 SPATA31C2B4DYI2 1134 aa3.52□□□□□ -1.85
UBXN4-207ENST00000471246 MEN1O00255 615 aa3.52□□□□□ -1.85
UBXN4-207ENST00000471246 HRCP23327 699 aa3.52□□□□□ -1.85
UBXN4-207ENST00000471246 WDR44Q5JSH3 913 aa3.52□□□□□ -1.85
UBXN4-207ENST00000471246 FCHSD1Q86WN1 690 aa3.52□□□□□ -1.85
UBXN4-207ENST00000471246 GPAMQ9HCL2 828 aa3.52□□□□□ -1.85
UBXN4-207ENST00000471246 ERVH48-1M5A8F1 160 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 BNIP3LO60238 219 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 SSTR4P31391 388 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 ADGRE1Q14246 886 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 QPCTQ16769 361 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 TUSC1Q2TAM9 212 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 TPRNQ4KMQ1 711 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 TP53INP1Q96A56 240 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 DDRGK1Q96HY6 314 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 NACC1Q96RE7 527 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 FAM117AQ9C073 453 aa3.51□□□□□ -1.85
UBXN4-207ENST00000471246 A0A1W2PRU2 124 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 SPDYE3A6NKU9 549 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 LILRB3O75022 631 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 RAB15P59190 212 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 COL9A3Q14050 684 aaPredicted RBP3.5□□□□□ -1.85
UBXN4-207ENST00000471246 MBTPS1Q14703 1052 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 NEUROD2Q15784 382 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 FBLN7Q53RD9 439 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 SH3D19Q5HYK7 790 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 SLC27A3Q5K4L6 730 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 TSC1Q92574 1164 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 GPKOWQ92917 476 aaPredicted RBP eCLIP3.5□□□□□ -1.85
UBXN4-207ENST00000471246 ARHGAP9Q9BRR9 750 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 RSPH6AQ9H0K4 717 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 POLR3EQ9NVU0 708 aa3.5□□□□□ -1.85
UBXN4-207ENST00000471246 NUTM2BA6NNL0 878 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 NUTM2EB1AL46 878 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 WASLO00401 505 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 C8AP07357 584 aa3.49□□□□□ -1.85
UBXN4-207ENST00000471246 GP2P55259 537 aaKnown RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 NUTM2DQ5VT03 806 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 TAS1R3Q7RTX0 852 aa3.49□□□□□ -1.85
UBXN4-207ENST00000471246 NUTM2AQ8IVF1 878 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 SSBP4Q9BWG4 385 aaPredicted RBP3.49□□□□□ -1.85
UBXN4-207ENST00000471246 CYLDQ9NQC7 956 aa3.49□□□□□ -1.85
UBXN4-207ENST00000471246 C9orf172C9J069 976 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 ATP5J2-PTCD1G3V325 749 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 ADH6P28332 368 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 BRPF1P55201 1214 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-207ENST00000471246 TRIM28Q13263 835 aaKnown RBP3.48□□□□□ -1.85
UBXN4-207ENST00000471246 LBRQ14739 615 aaKnown RBP3.48□□□□□ -1.85
UBXN4-207ENST00000471246 SKIV2LQ15477 1246 aaKnown RBP3.48□□□□□ -1.85
UBXN4-207ENST00000471246 RTL5Q5HYW3 569 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-207ENST00000471246 PDXDC2PQ6P474 469 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 TXNRD3Q86VQ6 643 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 HELBQ8NG08 1087 aaPredicted RBP3.48□□□□□ -1.85
UBXN4-207ENST00000471246 OCSTAMPQ9BR26 566 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 RUBCNLQ9H714 662 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 HCN2Q9UL51 889 aa3.48□□□□□ -1.85
UBXN4-207ENST00000471246 MED26O95402 600 aa3.47□□□□□ -1.85
UBXN4-207ENST00000471246 SELPP16109 830 aa3.47□□□□□ -1.85
UBXN4-207ENST00000471246 CD97P48960 835 aa3.47□□□□□ -1.85
UBXN4-207ENST00000471246 NRG1Q02297 640 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-207ENST00000471246 FBXO31Q5XUX0 539 aaPredicted RBP3.47□□□□□ -1.85
UBXN4-207ENST00000471246 OGFOD2Q6N063 350 aa3.47□□□□□ -1.85
UBXN4-207ENST00000471246 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.47□□□□□ -1.85
UBXN4-207ENST00000471246 ZBTB33Q86T24 672 aa3.46□□□□□ -1.86
UBXN4-207ENST00000471246 PROCA1Q8NCQ7 364 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-207ENST00000471246 KRTAP9-3Q9BYQ3 159 aa3.46□□□□□ -1.86
UBXN4-207ENST00000471246 ATP1B4Q9UN42 357 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-207ENST00000471246 PHKA2P46019 1235 aa3.45□□□□□ -1.86
UBXN4-207ENST00000471246 PPP2R2DQ66LE6 453 aa3.45□□□□□ -1.86
UBXN4-207ENST00000471246 SPOCD1Q6ZMY3 1216 aa3.45□□□□□ -1.86
UBXN4-207ENST00000471246 NLRP3Q96P20 1036 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms