RNA–Protein interactions for RNA: ENST00000469403.1

AGRN-205, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-205ENST00000469403 SYTL4Q96C24 671 aaPredicted RBP34.64■■■■□ 3.14
AGRN-205ENST00000469403 TRIM37O94972 964 aa34.63■■■■□ 3.13
AGRN-205ENST00000469403 HNRNPUQ00839 825 aaKnown RBP eCLIP34.63■■■■□ 3.13
AGRN-205ENST00000469403 TAF7Q15545 349 aaPredicted RBP34.63■■■■□ 3.13
AGRN-205ENST00000469403 WDR63Q8IWG1 891 aa34.63■■■■□ 3.13
AGRN-205ENST00000469403 SALL2Q9Y467 1007 aaPredicted RBP34.63■■■■□ 3.13
AGRN-205ENST00000469403 TNS1Q9HBL0 1735 aaKnown RBP34.63■■■■□ 3.13
AGRN-205ENST00000469403 IL16Q14005 1332 aa34.62■■■■□ 3.13
AGRN-205ENST00000469403 BABAM1Q9NWV8 329 aa34.62■■■■□ 3.13
AGRN-205ENST00000469403 PAPPAQ13219 1627 aa34.62■■■■□ 3.13
AGRN-205ENST00000469403 PTF1AQ7RTS3 328 aa34.61■■■■□ 3.13
AGRN-205ENST00000469403 EP400Q96L91 3159 aa34.6■■■■□ 3.13
AGRN-205ENST00000469403 ZNF853P0CG23 659 aa34.57■■■■□ 3.12
AGRN-205ENST00000469403 CCDC125Q86Z20 511 aa34.57■■■■□ 3.12
AGRN-205ENST00000469403 KDM3BQ7LBC6 1761 aa34.57■■■■□ 3.12
AGRN-205ENST00000469403 CHL1O00533 1208 aa34.56■■■■□ 3.12
AGRN-205ENST00000469403 CFAP44Q96MT7 982 aa34.56■■■■□ 3.12
AGRN-205ENST00000469403 IFT57Q9NWB7 429 aa34.56■■■■□ 3.12
AGRN-205ENST00000469403 BTBD11A6QL63 1104 aa34.55■■■■□ 3.12
AGRN-205ENST00000469403 ZBED9Q6R2W3 1325 aa34.55■■■■□ 3.12
AGRN-205ENST00000469403 SMARCC1Q92922 1105 aaPredicted RBP34.54■■■■□ 3.12
AGRN-205ENST00000469403 ATG3Q9NT62 314 aa34.54■■■■□ 3.12
AGRN-205ENST00000469403 UBR2Q8IWV8 1755 aa34.54■■■■□ 3.12
AGRN-205ENST00000469403 GNAI1P63096 354 aa34.53■■■■□ 3.12
AGRN-205ENST00000469403 RGPD3A6NKT7 1758 aaPredicted RBP34.52■■■■□ 3.12
AGRN-205ENST00000469403 RGPD4Q7Z3J3 1758 aa34.52■■■■□ 3.12
AGRN-205ENST00000469403 ASAP1Q9ULH1 1129 aa34.52■■■■□ 3.12
AGRN-205ENST00000469403 ZNF790Q6PG37 636 aa34.51■■■■□ 3.12
AGRN-205ENST00000469403 LY75O60449 1722 aa34.5■■■■□ 3.11
AGRN-205ENST00000469403 PLSCR1O15162 318 aa34.49■■■■□ 3.11
AGRN-205ENST00000469403 GOLGA2Q08379 1002 aa34.49■■■■□ 3.11
AGRN-205ENST00000469403 SLC39A6Q13433 755 aa34.48■■■■□ 3.11
AGRN-205ENST00000469403 TSPYL4Q9UJ04 414 aa34.48■■■■□ 3.11
AGRN-205ENST00000469403 KCPQ6ZWJ8 1503 aa34.48■■■■□ 3.11
AGRN-205ENST00000469403 PALLDQ8WX93 1383 aa34.48■■■■□ 3.11
AGRN-205ENST00000469403 ZNF831Q5JPB2 1677 aa34.47■■■■□ 3.11
AGRN-205ENST00000469403 APBA3O96018 575 aa34.47■■■■□ 3.11
AGRN-205ENST00000469403 MIS18AQ9NYP9 233 aa34.47■■■■□ 3.11
AGRN-205ENST00000469403 TTC5Q8N0Z6 440 aa34.46■■■■□ 3.11
AGRN-205ENST00000469403 UPF1Q92900 1129 aaKnown RBP eCLIP34.46■■■■□ 3.11
AGRN-205ENST00000469403 SF3B2Q13435 895 aaKnown RBP34.45■■■■□ 3.11
AGRN-205ENST00000469403 MBIPQ9NS73 344 aa34.45■■■■□ 3.11
AGRN-205ENST00000469403 LAS1LQ9Y4W2 734 aaKnown RBP34.45■■■■□ 3.11
AGRN-205ENST00000469403 SPINK5Q9NQ38 1064 aaPredicted RBP34.44■■■■□ 3.1
AGRN-205ENST00000469403 CICQ96RK0 1608 aaPredicted RBP34.44■■■■□ 3.1
AGRN-205ENST00000469403 KCNQ3O43525 872 aa34.43■■■■□ 3.1
AGRN-205ENST00000469403 HEG1Q9ULI3 1381 aa34.42■■■■□ 3.1
AGRN-205ENST00000469403 E9PSI1 815 aa34.42■■■■□ 3.1
AGRN-205ENST00000469403 MYH16Q9H6N6 1097 aa34.42■■■■□ 3.1
AGRN-205ENST00000469403 SLFN5Q08AF3 891 aa34.41■■■■□ 3.1
AGRN-205ENST00000469403 BAG6P46379 1132 aa34.4■■■■□ 3.1
AGRN-205ENST00000469403 EIF4A1P60842 406 aaKnown RBP34.4■■■■□ 3.1
AGRN-205ENST00000469403 TRMT2AQ8IZ69 625 aaKnown RBP34.4■■■■□ 3.1
AGRN-205ENST00000469403 ZNF496Q96IT1 587 aaPredicted RBP34.4■■■■□ 3.1
AGRN-205ENST00000469403 FMNL2Q96PY5 1086 aa34.4■■■■□ 3.1
AGRN-205ENST00000469403 VSIG10Q8N0Z9 540 aa34.39■■■■□ 3.1
AGRN-205ENST00000469403 FANCIQ9NVI1 1328 aa34.38■■■■□ 3.09
AGRN-205ENST00000469403 LOC102724428A0A0B4J2F2 783 aa34.38■■■■□ 3.09
AGRN-205ENST00000469403 SIK1P57059 783 aa34.38■■■■□ 3.09
AGRN-205ENST00000469403 PTCD1O75127 700 aaKnown RBP34.37■■■■□ 3.09
AGRN-205ENST00000469403 CDCA7LQ96GN5 454 aa34.37■■■■□ 3.09
AGRN-205ENST00000469403 CAMKK2Q96RR4 588 aa34.37■■■■□ 3.09
AGRN-205ENST00000469403 SLC27A3Q5K4L6 730 aa34.36■■■■□ 3.09
AGRN-205ENST00000469403 TSR2Q969E8 191 aaKnown RBP34.36■■■■□ 3.09
AGRN-205ENST00000469403 SLC4A9Q96Q91 983 aa34.36■■■■□ 3.09
AGRN-205ENST00000469403 RBM42Q9BTD8 480 aaKnown RBP34.35■■■■□ 3.09
AGRN-205ENST00000469403 TJP1Q07157 1748 aa34.34■■■■□ 3.09
AGRN-205ENST00000469403 PROM2Q8N271 834 aa34.34■■■■□ 3.09
AGRN-205ENST00000469403 YTHDC1Q96MU7 727 aaKnown RBP34.34■■■■□ 3.09
AGRN-205ENST00000469403 TXNRD1Q16881 649 aa34.33■■■■□ 3.09
AGRN-205ENST00000469403 RREB1Q92766 1687 aa34.33■■■■□ 3.09
AGRN-205ENST00000469403 GIGYF1O75420 1035 aaPredicted RBP34.31■■■■□ 3.08
AGRN-205ENST00000469403 SNRPA1P09661 255 aaKnown RBP34.31■■■■□ 3.08
AGRN-205ENST00000469403 HMGB2P26583 209 aaKnown RBP34.31■■■■□ 3.08
AGRN-205ENST00000469403 EN1Q05925 392 aaPredicted RBP34.31■■■■□ 3.08
AGRN-205ENST00000469403 CCNL1Q9UK58 526 aaPredicted RBP34.31■■■■□ 3.08
AGRN-205ENST00000469403 TAF1LQ8IZX4 1826 aa34.3■■■■□ 3.08
AGRN-205ENST00000469403 DUSP27Q5VZP5 1158 aa34.3■■■■□ 3.08
AGRN-205ENST00000469403 DEFB132Q7Z7B7 95 aa34.3■■■■□ 3.08
AGRN-205ENST00000469403 TEX13AQ9BXU3 409 aaPredicted RBP34.3■■■■□ 3.08
AGRN-205ENST00000469403 SOS1Q07889 1333 aaPredicted RBP34.3■■■■□ 3.08
AGRN-205ENST00000469403 C5P01031 1676 aa34.29■■■■□ 3.08
AGRN-205ENST00000469403 HOXB7P09629 217 aa34.29■■■■□ 3.08
AGRN-205ENST00000469403 ATP6V1AP38606 617 aa34.29■■■■□ 3.08
AGRN-205ENST00000469403 COL5A3P25940 1745 aaPredicted RBP34.29■■■■□ 3.08
AGRN-205ENST00000469403 LAMB4A4D0S4 1761 aa34.28■■■■□ 3.08
AGRN-205ENST00000469403 LRRC4BQ9NT99 713 aa34.28■■■■□ 3.08
AGRN-205ENST00000469403 ITPK1Q13572 414 aa34.27■■■■□ 3.08
AGRN-205ENST00000469403 EZH2Q15910 746 aaKnown RBP34.27■■■■□ 3.08
AGRN-205ENST00000469403 C8orf58Q8NAV2 365 aa34.26■■■■□ 3.08
AGRN-205ENST00000469403 KRT24Q2M2I5 525 aa34.25■■■■□ 3.07
AGRN-205ENST00000469403 EXOSC9Q06265 439 aaKnown RBP34.24■■■■□ 3.07
AGRN-205ENST00000469403 DNAJC10Q8IXB1 793 aa34.24■■■■□ 3.07
AGRN-205ENST00000469403 NUP188Q5SRE5 1749 aa34.23■■■■□ 3.07
AGRN-205ENST00000469403 PRAMEF22A3QJZ6 481 aa34.21■■■■□ 3.07
AGRN-205ENST00000469403 CYP19A1P11511 503 aaPredicted RBP34.21■■■■□ 3.07
AGRN-205ENST00000469403 KCNQ4P56696 695 aa34.21■■■■□ 3.07
AGRN-205ENST00000469403 STARD3NLO95772 234 aa34.2■■■■□ 3.07
AGRN-205ENST00000469403 TSPYL6Q8N831 410 aa34.2■■■■□ 3.07
AGRN-205ENST00000469403 LINC00116Q8NCU8 138 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms