RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
LIMS2-213ENST00000469300 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
LIMS2-213ENST00000469300 TDO2P48775 406 aa17.9■□□□□ 0.46
LIMS2-213ENST00000469300 LETM1O95202 739 aaPredicted RBP17.9■□□□□ 0.46
LIMS2-213ENST00000469300 TESK2Q96S53 571 aa17.89■□□□□ 0.46
LIMS2-213ENST00000469300 BACH2Q9BYV9 841 aa17.89■□□□□ 0.46
LIMS2-213ENST00000469300 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
LIMS2-213ENST00000469300 ANKRD18BA2A2Z9 1011 aa17.89■□□□□ 0.45
LIMS2-213ENST00000469300 CCDC69A6NI79 296 aa17.89■□□□□ 0.45
LIMS2-213ENST00000469300 AKAP4Q5JQC9 854 aa17.89■□□□□ 0.45
LIMS2-213ENST00000469300 PCMTD1Q96MG8 357 aaPredicted RBP17.89■□□□□ 0.45
LIMS2-213ENST00000469300 KCNA6P17658 529 aa17.89■□□□□ 0.45
LIMS2-213ENST00000469300 MTERF4Q7Z6M4 381 aaKnown RBP17.89■□□□□ 0.45
LIMS2-213ENST00000469300 LRRC59Q96AG4 307 aaKnown RBP17.89■□□□□ 0.45
LIMS2-213ENST00000469300 IDH1O75874 414 aaKnown RBP17.88■□□□□ 0.45
LIMS2-213ENST00000469300 FOSBP53539 338 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 GOLGA6L1Q8N7Z2 621 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 AIDAQ96BJ3 306 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 UBAC1Q9BSL1 405 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 MTMR7Q9Y216 660 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 OLFM4Q6UX06 510 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 FAM43AQ8N2R8 423 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
LIMS2-213ENST00000469300 NCBP3Q53F19 620 aaKnown RBP17.88■□□□□ 0.45
LIMS2-213ENST00000469300 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.88■□□□□ 0.45
LIMS2-213ENST00000469300 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
LIMS2-213ENST00000469300 SLC5A1P13866 664 aa17.87■□□□□ 0.45
LIMS2-213ENST00000469300 RBM5P52756 815 aaKnown RBP eCLIP17.87■□□□□ 0.45
LIMS2-213ENST00000469300 PPP1R42Q7Z4L9 355 aa17.87■□□□□ 0.45
LIMS2-213ENST00000469300 CWC25Q9NXE8 425 aaPredicted RBP17.87■□□□□ 0.45
LIMS2-213ENST00000469300 ABCC1P33527 1531 aa17.87■□□□□ 0.45
LIMS2-213ENST00000469300 IMMTQ16891 758 aaKnown RBP17.87■□□□□ 0.45
LIMS2-213ENST00000469300 CDC5LQ99459 802 aaKnown RBP17.87■□□□□ 0.45
LIMS2-213ENST00000469300 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
LIMS2-213ENST00000469300 KINO60870 393 aaKnown RBP17.87■□□□□ 0.45
LIMS2-213ENST00000469300 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
LIMS2-213ENST00000469300 POLKQ9UBT6 870 aa17.86■□□□□ 0.45
LIMS2-213ENST00000469300 U3KPZ7 1027 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-213ENST00000469300 WDR33Q9C0J8 1336 aaKnown RBP17.86■□□□□ 0.45
LIMS2-213ENST00000469300 AK7Q96M32 723 aa17.86■□□□□ 0.45
LIMS2-213ENST00000469300 CCDC85AQ96PX6 553 aaPredicted RBP17.86■□□□□ 0.45
LIMS2-213ENST00000469300 TRIM27P14373 513 aa17.86■□□□□ 0.45
LIMS2-213ENST00000469300 PZPP20742 1482 aa17.86■□□□□ 0.45
LIMS2-213ENST00000469300 PARD3Q8TEW0 1356 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 MAP3K12Q12852 859 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 CWC27Q6UX04 472 aaKnown RBP17.85■□□□□ 0.45
LIMS2-213ENST00000469300 F6X3S4 739 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 K7ELQ4 463 aaPredicted RBP17.85■□□□□ 0.45
LIMS2-213ENST00000469300 STK38Q15208 465 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 SOGA3Q5TF21 947 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 SLF2Q8IX21 1173 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 ABCF2Q9UG63 623 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 NCKAP5LQ9HCH0 1330 aa17.85■□□□□ 0.45
LIMS2-213ENST00000469300 EIF4A2Q14240 407 aaKnown RBP17.85■□□□□ 0.45
LIMS2-213ENST00000469300 LRRFIP2Q9Y608 721 aaKnown RBP17.85■□□□□ 0.45
LIMS2-213ENST00000469300 RPGRQ92834 1020 aaKnown RBP17.84■□□□□ 0.45
LIMS2-213ENST00000469300 GCP02774 474 aa17.84■□□□□ 0.45
LIMS2-213ENST00000469300 WASF1Q92558 559 aa17.84■□□□□ 0.45
LIMS2-213ENST00000469300 ATP2B2Q01814 1243 aa17.84■□□□□ 0.45
LIMS2-213ENST00000469300 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
LIMS2-213ENST00000469300 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-213ENST00000469300 IL2RBP14784 551 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 CCDC70Q6NSX1 233 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 ZSCAN29Q8IWY8 852 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-213ENST00000469300 CDK5RAP3Q96JB5 506 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 ZBTB3Q9H5J0 574 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.45
LIMS2-213ENST00000469300 CIZ1Q9ULV3 898 aaPredicted RBP17.83■□□□□ 0.45
LIMS2-213ENST00000469300 R3HCC1Q9Y3T6 440 aaKnown RBP17.83■□□□□ 0.45
LIMS2-213ENST00000469300 PIP4K2AP48426 406 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-213ENST00000469300 MAP4K4O95819 1239 aaPredicted RBP17.83■□□□□ 0.44
LIMS2-213ENST00000469300 NOL7Q9UMY1 257 aaKnown RBP17.83■□□□□ 0.44
LIMS2-213ENST00000469300 CFAP74Q9C0B2 1584 aa17.83■□□□□ 0.44
LIMS2-213ENST00000469300 HSPA2P54652 639 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 PIK3C2GO75747 1445 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 PI4KAP2A4QPH2 592 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 DDB1Q16531 1140 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 PI4KAP1Q8N8J0 262 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 JAKMIP1Q96N16 626 aaKnown RBP17.82■□□□□ 0.44
LIMS2-213ENST00000469300 ALDH1L1O75891 902 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 IL27Q8NEV9 243 aa17.82■□□□□ 0.44
LIMS2-213ENST00000469300 SETQ01105 290 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-213ENST00000469300 ANKIB1Q9P2G1 1089 aa17.81■□□□□ 0.44
LIMS2-213ENST00000469300 ATP2B1P20020 1258 aa17.81■□□□□ 0.44
LIMS2-213ENST00000469300 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
LIMS2-213ENST00000469300 NPC1L1Q9UHC9 1359 aa17.81■□□□□ 0.44
LIMS2-213ENST00000469300 IP6K1Q92551 441 aa17.81■□□□□ 0.44
LIMS2-213ENST00000469300 CDCA7Q9BWT1 371 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-213ENST00000469300 ZFYVE16Q7Z3T8 1539 aa17.8■□□□□ 0.44
LIMS2-213ENST00000469300 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
LIMS2-213ENST00000469300 KRT85P78386 507 aa17.8■□□□□ 0.44
LIMS2-213ENST00000469300 LARP1BQ659C4 914 aaKnown RBP17.8■□□□□ 0.44
LIMS2-213ENST00000469300 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
LIMS2-213ENST00000469300 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
LIMS2-213ENST00000469300 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-213ENST00000469300 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
LIMS2-213ENST00000469300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-213ENST00000469300 LDHCP07864 332 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms