RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 ITGB4P16144 1822 aa19.23■□□□□ 0.67
HLA-F-223ENST00000465459 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
HLA-F-223ENST00000465459 ZNF521Q96K83 1311 aa19.23■□□□□ 0.67
HLA-F-223ENST00000465459 THUMPD2Q9BTF0 503 aaKnown RBP19.22■□□□□ 0.67
HLA-F-223ENST00000465459 ILDR2Q71H61 639 aa19.21■□□□□ 0.67
HLA-F-223ENST00000465459 SMARCC1Q92922 1105 aaPredicted RBP19.21■□□□□ 0.67
HLA-F-223ENST00000465459 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
HLA-F-223ENST00000465459 SIPA1L3O60292 1781 aaPredicted RBP19.2■□□□□ 0.66
HLA-F-223ENST00000465459 GNAI1P63096 354 aa19.2■□□□□ 0.66
HLA-F-223ENST00000465459 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
HLA-F-223ENST00000465459 IFT57Q9NWB7 429 aa19.2■□□□□ 0.66
HLA-F-223ENST00000465459 BTBD11A6QL63 1104 aa19.19■□□□□ 0.66
HLA-F-223ENST00000465459 CHL1O00533 1208 aa19.19■□□□□ 0.66
HLA-F-223ENST00000465459 EP400Q96L91 3159 aa19.19■□□□□ 0.66
HLA-F-223ENST00000465459 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
HLA-F-223ENST00000465459 ZNF853P0CG23 659 aa19.18■□□□□ 0.66
HLA-F-223ENST00000465459 SF3B2Q13435 895 aaKnown RBP19.18■□□□□ 0.66
HLA-F-223ENST00000465459 PTF1AQ7RTS3 328 aa19.18■□□□□ 0.66
HLA-F-223ENST00000465459 ZBED9Q6R2W3 1325 aa19.18■□□□□ 0.66
HLA-F-223ENST00000465459 PLSCR1O15162 318 aa19.17■□□□□ 0.66
HLA-F-223ENST00000465459 ZNF790Q6PG37 636 aa19.17■□□□□ 0.66
HLA-F-223ENST00000465459 ATG3Q9NT62 314 aa19.17■□□□□ 0.66
HLA-F-223ENST00000465459 BTAF1O14981 1849 aa19.16■□□□□ 0.66
HLA-F-223ENST00000465459 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
HLA-F-223ENST00000465459 TTC5Q8N0Z6 440 aa19.16■□□□□ 0.66
HLA-F-223ENST00000465459 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
HLA-F-223ENST00000465459 APBA3O96018 575 aa19.15■□□□□ 0.66
HLA-F-223ENST00000465459 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
HLA-F-223ENST00000465459 TSPYL4Q9UJ04 414 aa19.15■□□□□ 0.66
HLA-F-223ENST00000465459 TNS1Q9HBL0 1735 aaKnown RBP19.14■□□□□ 0.66
HLA-F-223ENST00000465459 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
HLA-F-223ENST00000465459 PALLDQ8WX93 1383 aa19.14■□□□□ 0.65
HLA-F-223ENST00000465459 PAPPAQ13219 1627 aa19.14■□□□□ 0.65
HLA-F-223ENST00000465459 E9PSI1 815 aa19.13■□□□□ 0.65
HLA-F-223ENST00000465459 BAG6P46379 1132 aa19.13■□□□□ 0.65
HLA-F-223ENST00000465459 SLC39A6Q13433 755 aa19.13■□□□□ 0.65
HLA-F-223ENST00000465459 UPF1Q92900 1129 aaKnown RBP eCLIP19.13■□□□□ 0.65
HLA-F-223ENST00000465459 LAS1LQ9Y4W2 734 aaKnown RBP19.13■□□□□ 0.65
HLA-F-223ENST00000465459 VSIG10Q8N0Z9 540 aa19.12■□□□□ 0.65
HLA-F-223ENST00000465459 FMNL2Q96PY5 1086 aa19.12■□□□□ 0.65
HLA-F-223ENST00000465459 MIS18AQ9NYP9 233 aa19.12■□□□□ 0.65
HLA-F-223ENST00000465459 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
HLA-F-223ENST00000465459 SLC27A3Q5K4L6 730 aa19.11■□□□□ 0.65
HLA-F-223ENST00000465459 MBIPQ9NS73 344 aa19.11■□□□□ 0.65
HLA-F-223ENST00000465459 RGPD3A6NKT7 1758 aaPredicted RBP19.11■□□□□ 0.65
HLA-F-223ENST00000465459 RGPD4Q7Z3J3 1758 aa19.11■□□□□ 0.65
HLA-F-223ENST00000465459 LOC102724428A0A0B4J2F2 783 aa19.1■□□□□ 0.65
HLA-F-223ENST00000465459 SIK1P57059 783 aa19.1■□□□□ 0.65
HLA-F-223ENST00000465459 EIF4A1P60842 406 aaKnown RBP19.1■□□□□ 0.65
HLA-F-223ENST00000465459 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
HLA-F-223ENST00000465459 ZNF496Q96IT1 587 aaPredicted RBP19.1■□□□□ 0.65
HLA-F-223ENST00000465459 KCPQ6ZWJ8 1503 aa19.1■□□□□ 0.65
HLA-F-223ENST00000465459 UBR2Q8IWV8 1755 aa19.09■□□□□ 0.65
HLA-F-223ENST00000465459 HEG1Q9ULI3 1381 aa19.09■□□□□ 0.65
HLA-F-223ENST00000465459 KCNQ3O43525 872 aa19.09■□□□□ 0.65
HLA-F-223ENST00000465459 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
HLA-F-223ENST00000465459 ZNF831Q5JPB2 1677 aa19.08■□□□□ 0.65
HLA-F-223ENST00000465459 SOS1Q07889 1333 aaPredicted RBP19.08■□□□□ 0.65
HLA-F-223ENST00000465459 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.64
HLA-F-223ENST00000465459 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.64
HLA-F-223ENST00000465459 RBM42Q9BTD8 480 aaKnown RBP19.08■□□□□ 0.64
HLA-F-223ENST00000465459 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
HLA-F-223ENST00000465459 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
HLA-F-223ENST00000465459 LY75O60449 1722 aa19.08■□□□□ 0.64
HLA-F-223ENST00000465459 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
HLA-F-223ENST00000465459 HOXB7P09629 217 aa19.07■□□□□ 0.64
HLA-F-223ENST00000465459 SNRPA1P09661 255 aaKnown RBP19.07■□□□□ 0.64
HLA-F-223ENST00000465459 TXNRD1Q16881 649 aa19.07■□□□□ 0.64
HLA-F-223ENST00000465459 TSR2Q969E8 191 aaKnown RBP19.06■□□□□ 0.64
HLA-F-223ENST00000465459 CHMP4AQ9BY43 222 aa19.06■□□□□ 0.64
HLA-F-223ENST00000465459 CCNL1Q9UK58 526 aaPredicted RBP19.06■□□□□ 0.64
HLA-F-223ENST00000465459 CICQ96RK0 1608 aaPredicted RBP19.05■□□□□ 0.64
HLA-F-223ENST00000465459 GIGYF1O75420 1035 aaPredicted RBP19.05■□□□□ 0.64
HLA-F-223ENST00000465459 ATP6V1AP38606 617 aa19.05■□□□□ 0.64
HLA-F-223ENST00000465459 EN1Q05925 392 aaPredicted RBP19.05■□□□□ 0.64
HLA-F-223ENST00000465459 PROM2Q8N271 834 aa19.05■□□□□ 0.64
HLA-F-223ENST00000465459 CDCA7LQ96GN5 454 aa19.05■□□□□ 0.64
HLA-F-223ENST00000465459 SLC4A9Q96Q91 983 aa19.05■□□□□ 0.64
HLA-F-223ENST00000465459 YTHDC1Q96MU7 727 aaKnown RBP19.04■□□□□ 0.64
HLA-F-223ENST00000465459 DUSP27Q5VZP5 1158 aa19.03■□□□□ 0.64
HLA-F-223ENST00000465459 DEFB132Q7Z7B7 95 aa19.03■□□□□ 0.64
HLA-F-223ENST00000465459 STARD3NLO95772 234 aa19.02■□□□□ 0.64
HLA-F-223ENST00000465459 EZH2Q15910 746 aaKnown RBP19.02■□□□□ 0.64
HLA-F-223ENST00000465459 LRRC4BQ9NT99 713 aa19.02■□□□□ 0.64
HLA-F-223ENST00000465459 ITPK1Q13572 414 aa19.01■□□□□ 0.63
HLA-F-223ENST00000465459 CT47B1P0C2W7 299 aaPredicted RBP19■□□□□ 0.63
HLA-F-223ENST00000465459 EXOSC9Q06265 439 aaKnown RBP19■□□□□ 0.63
HLA-F-223ENST00000465459 RC3H1Q5TC82 1133 aaKnown RBP19■□□□□ 0.63
HLA-F-223ENST00000465459 DNAJC10Q8IXB1 793 aa19■□□□□ 0.63
HLA-F-223ENST00000465459 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
HLA-F-223ENST00000465459 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
HLA-F-223ENST00000465459 TWISTNBQ3B726 338 aaPredicted RBP18.99■□□□□ 0.63
HLA-F-223ENST00000465459 ERBB4Q15303 1308 aa18.99■□□□□ 0.63
HLA-F-223ENST00000465459 CNTNAP4Q9C0A0 1308 aa18.99■□□□□ 0.63
HLA-F-223ENST00000465459 C5P01031 1676 aa18.98■□□□□ 0.63
HLA-F-223ENST00000465459 TJP1Q07157 1748 aa18.98■□□□□ 0.63
HLA-F-223ENST00000465459 SOCS7O14512 581 aa18.98■□□□□ 0.63
HLA-F-223ENST00000465459 KRT24Q2M2I5 525 aa18.98■□□□□ 0.63
HLA-F-223ENST00000465459 ZNF428Q96B54 188 aa18.98■□□□□ 0.63
HLA-F-223ENST00000465459 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms