RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 CNNM1Q9NRU3 951 aa14.22□□□□□ -0.13
RBM39-223ENST00000463004 GLRX3O76003 335 aaKnown RBP14.22□□□□□ -0.13
RBM39-223ENST00000463004 CDK11BP21127 795 aaKnown RBP14.22□□□□□ -0.13
RBM39-223ENST00000463004 MRPL50Q8N5N7 158 aaKnown RBP14.21□□□□□ -0.13
RBM39-223ENST00000463004 ROBO2Q9HCK4 1378 aa14.21□□□□□ -0.13
RBM39-223ENST00000463004 TOMM22Q9NS69 142 aa14.21□□□□□ -0.13
RBM39-223ENST00000463004 MIS18AQ9NYP9 233 aa14.21□□□□□ -0.13
RBM39-223ENST00000463004 USP6P35125 1406 aa14.21□□□□□ -0.13
RBM39-223ENST00000463004 PCDH11XQ9BZA7 1347 aa14.21□□□□□ -0.13
RBM39-223ENST00000463004 PCDH11YQ9BZA8 1340 aa14.21□□□□□ -0.13
RBM39-223ENST00000463004 AKAP17AQ02040 695 aaKnown RBP14.21□□□□□ -0.14
RBM39-223ENST00000463004 AEBP1Q8IUX7 1158 aa14.2□□□□□ -0.14
RBM39-223ENST00000463004 LMTK3Q96Q04 1460 aa14.2□□□□□ -0.14
RBM39-223ENST00000463004 VAMP4O75379 141 aa14.2□□□□□ -0.14
RBM39-223ENST00000463004 RALYLQ86SE5 291 aaKnown RBP14.2□□□□□ -0.14
RBM39-223ENST00000463004 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
RBM39-223ENST00000463004 VWDEQ8N2E2 1590 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 SF3B2Q13435 895 aaKnown RBP14.19□□□□□ -0.14
RBM39-223ENST00000463004 MPHOSPH8Q99549 860 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 SLAIN2Q9P270 581 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 H3BQV1 296 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 CHRNA2Q15822 529 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 MED14O60244 1454 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 ERICH2A1L162 156 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
RBM39-223ENST00000463004 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
RBM39-223ENST00000463004 UBAP1LF5GYI3 381 aa14.18□□□□□ -0.14
RBM39-223ENST00000463004 TTC39AQ5SRH9 613 aa14.18□□□□□ -0.14
RBM39-223ENST00000463004 ANKRD1Q15327 319 aa14.18□□□□□ -0.14
RBM39-223ENST00000463004 ADAMTS2O95450 1211 aa14.18□□□□□ -0.14
RBM39-223ENST00000463004 APPP05067 770 aa14.18□□□□□ -0.14
RBM39-223ENST00000463004 CHL1O00533 1208 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 ORAI2Q96SN7 254 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 DEPDC5O75140 1603 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 WASHC4Q2M389 1173 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 CDK12Q9NYV4 1490 aaPredicted RBP14.17□□□□□ -0.14
RBM39-223ENST00000463004 RNMTO43148 476 aaKnown RBP14.17□□□□□ -0.14
RBM39-223ENST00000463004 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
RBM39-223ENST00000463004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.17□□□□□ -0.142e-26■■■□□ 15.2
RBM39-223ENST00000463004 TMEM94Q12767 1356 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 PTCD1O75127 700 aaKnown RBP14.17□□□□□ -0.14
RBM39-223ENST00000463004 TPM4P67936 248 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 KRT32Q14532 448 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 C20orf194Q5TEA3 1177 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 KSR2Q6VAB6 950 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 PHACTR3Q96KR7 559 aa14.17□□□□□ -0.14
RBM39-223ENST00000463004 CPLX1O14810 134 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 FBLN1P23142 703 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 TRIM29Q14134 588 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 AACSQ86V21 672 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 CTNNA3Q9UI47 895 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
RBM39-223ENST00000463004 PDCP20941 246 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 MYD88Q99836 296 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 SLC3A2P08195 630 aaKnown RBP14.16□□□□□ -0.14
RBM39-223ENST00000463004 MX1P20591 662 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 CWC22Q9HCG8 908 aaKnown RBP14.16□□□□□ -0.14
RBM39-223ENST00000463004 CWC25Q9NXE8 425 aaPredicted RBP14.16□□□□□ -0.14
RBM39-223ENST00000463004 SMC3Q9UQE7 1217 aa14.16□□□□□ -0.14
RBM39-223ENST00000463004 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
RBM39-223ENST00000463004 CLTCQ00610 1675 aaKnown RBP14.15□□□□□ -0.14
RBM39-223ENST00000463004 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 RNF123Q5XPI4 1314 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 ANKRD44Q8N8A2 993 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 NRXN1Q9ULB1 1477 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 BMP2KLQ5H9B9 411 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 C8orf58Q8NAV2 365 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 LINS1Q8NG48 757 aa14.15□□□□□ -0.14
RBM39-223ENST00000463004 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
RBM39-223ENST00000463004 NACAP1Q9BZK3 213 aa14.14□□□□□ -0.15
RBM39-223ENST00000463004 MAP3K2Q9Y2U5 619 aa14.14□□□□□ -0.15
RBM39-223ENST00000463004 NEXMIFQ5QGS0 1516 aa14.14□□□□□ -0.15
RBM39-223ENST00000463004 SF3A1Q15459 793 aaKnown RBP14.14□□□□□ -0.15
RBM39-223ENST00000463004 DDB1Q16531 1140 aa14.14□□□□□ -0.15
RBM39-223ENST00000463004 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
RBM39-223ENST00000463004 PI4KAP2A4QPH2 592 aa14.13□□□□□ -0.15
RBM39-223ENST00000463004 ZPR1O75312 459 aa14.13□□□□□ -0.15
RBM39-223ENST00000463004 PI4KAP1Q8N8J0 262 aa14.13□□□□□ -0.15
RBM39-223ENST00000463004 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
RBM39-223ENST00000463004 ADGRL3Q9HAR2 1447 aa14.13□□□□□ -0.15
RBM39-223ENST00000463004 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
RBM39-223ENST00000463004 LRRFIP2Q9Y608 721 aaKnown RBP14.13□□□□□ -0.15
RBM39-223ENST00000463004 TULP4Q9NRJ4 1543 aa14.13□□□□□ -0.15
RBM39-223ENST00000463004 IFIT5Q13325 482 aaKnown RBP14.13□□□□□ -0.15
RBM39-223ENST00000463004 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
RBM39-223ENST00000463004 DDX21Q9NR30 783 aaKnown RBP eCLIP14.12□□□□□ -0.15
RBM39-223ENST00000463004 SPATA31D1Q6ZQQ2 1576 aa14.12□□□□□ -0.15
RBM39-223ENST00000463004 NOL8Q76FK4 1167 aaKnown RBP14.12□□□□□ -0.15
RBM39-223ENST00000463004 ZSCAN31Q96LW9 406 aaPredicted RBP14.12□□□□□ -0.15
RBM39-223ENST00000463004 DNAJC2Q99543 621 aaKnown RBP14.12□□□□□ -0.15
RBM39-223ENST00000463004 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
RBM39-223ENST00000463004 GOLGA6L3A6NEY3 463 aa14.12□□□□□ -0.15
RBM39-223ENST00000463004 IFIT1P09914 478 aaKnown RBP14.12□□□□□ -0.15
RBM39-223ENST00000463004 F6X3S4 739 aa14.11□□□□□ -0.15
RBM39-223ENST00000463004 ANKRD18BA2A2Z9 1011 aa14.11□□□□□ -0.15
RBM39-223ENST00000463004 ATP8B2P98198 1209 aa14.1□□□□□ -0.15
RBM39-223ENST00000463004 EXOC6BQ9Y2D4 811 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms