RNA–Protein interactions for RNA: ENST00000462580.1

TUBGCP3-203, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-203ENST00000462580 BRICD5Q6PL45 260 aa8.92□□□□□ -0.98
TUBGCP3-203ENST00000462580 RNF19BQ6ZMZ0 732 aa8.92□□□□□ -0.98
TUBGCP3-203ENST00000462580 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
TUBGCP3-203ENST00000462580 SLIT1O75093 1534 aa8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 PIK3C2GO75747 1445 aa8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 ZPR1O75312 459 aa8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 IL21Q9HBE4 155 aa8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 ARHGEF28Q8N1W1 1705 aaKnown RBP8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 LAMC1P11047 1609 aa8.91□□□□□ -0.98
TUBGCP3-203ENST00000462580 LILRB3O75022 631 aa8.9□□□□□ -0.98
TUBGCP3-203ENST00000462580 NR1I2O75469 434 aa8.9□□□□□ -0.98
TUBGCP3-203ENST00000462580 NBPF1Q3BBV0 1214 aa8.9□□□□□ -0.98
TUBGCP3-203ENST00000462580 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.98
TUBGCP3-203ENST00000462580 STRCQ7RTU9 1775 aa8.9□□□□□ -0.98
TUBGCP3-203ENST00000462580 ALKQ9UM73 1620 aa8.9□□□□□ -0.99
TUBGCP3-203ENST00000462580 ADGRB1O14514 1584 aa8.9□□□□□ -0.99
TUBGCP3-203ENST00000462580 LMTK3Q96Q04 1460 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 TMEM2Q9UHN6 1383 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 TLL1O43897 1013 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 LTKP29376 864 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 CSPP1Q1MSJ5 1256 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 NKX2-3Q8TAU0 364 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 PCMTD1Q96MG8 357 aaPredicted RBP8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 HIRIP3Q9BW71 556 aaPredicted RBP8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 SETBP1Q9Y6X0 1596 aa8.89□□□□□ -0.99
TUBGCP3-203ENST00000462580 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
TUBGCP3-203ENST00000462580 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
TUBGCP3-203ENST00000462580 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
TUBGCP3-203ENST00000462580 QRICH2Q9H0J4 1663 aa8.88□□□□□ -0.99
TUBGCP3-203ENST00000462580 HSPA2P54652 639 aa8.87□□□□□ -0.99
TUBGCP3-203ENST00000462580 PPP2R2DQ66LE6 453 aa8.87□□□□□ -0.99
TUBGCP3-203ENST00000462580 FAM160A2Q8N612 972 aaPredicted RBP8.87□□□□□ -0.99
TUBGCP3-203ENST00000462580 KNDC1Q76NI1 1749 aa8.87□□□□□ -0.99
TUBGCP3-203ENST00000462580 SCAF11Q99590 1463 aaKnown RBP8.87□□□□□ -0.99
TUBGCP3-203ENST00000462580 STRCP1A6NGW2 1772 aa8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 RPGRIP1LQ68CZ1 1315 aa8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 FMNL1O95466 1100 aaPredicted RBP8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 MTMR2Q13614 643 aa8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 Q3C1V9 767 aa8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 ZBTB3Q9H5J0 574 aa8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 ADAMTS13Q76LX8 1427 aa8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 ROCK2O75116 1388 aaKnown RBP8.86□□□□□ -0.99
TUBGCP3-203ENST00000462580 CHD2O14647 1828 aaKnown RBP8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 CFAP99D6REC4 459 aa8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 HSPA5P11021 654 aaKnown RBP8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 KCNC4Q03721 635 aa8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 TMEM132EQ6IEE7 984 aa8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 SPSB2Q99619 263 aa8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 GPRASP1Q5JY77 1395 aa8.85□□□□□ -0.99
TUBGCP3-203ENST00000462580 TXNDC2Q86VQ3 553 aa8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 XRN1Q8IZH2 1706 aaKnown RBP8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 ARID3AQ99856 593 aa8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 USB1Q9BQ65 265 aaKnown RBP8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 USP47Q96K76 1375 aa8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 PLEKHG1Q9ULL1 1385 aa8.84□□□□□ -0.99
TUBGCP3-203ENST00000462580 MED14O60244 1454 aa8.83□□□□□ -1
TUBGCP3-203ENST00000462580 PTPRUQ92729 1446 aa8.83□□□□□ -1
TUBGCP3-203ENST00000462580 ADH1BP00325 375 aa8.83□□□□□ -1
TUBGCP3-203ENST00000462580 CARD11Q9BXL7 1154 aa8.83□□□□□ -1
TUBGCP3-203ENST00000462580 PRDM9Q9NQV7 894 aa8.83□□□□□ -1
TUBGCP3-203ENST00000462580 METP08581 1390 aa8.83□□□□□ -1
TUBGCP3-203ENST00000462580 DIP2AQ14689 1571 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 RFC5P40937 340 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 MSS51Q4VC12 460 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 IFFO2Q5TF58 517 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 THEMISQ8N1K5 641 aaPredicted RBP8.82□□□□□ -1
TUBGCP3-203ENST00000462580 PRR7Q8TB68 274 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 SLC26A8Q96RN1 970 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 BCL11AQ9H165 835 aa8.82□□□□□ -1
TUBGCP3-203ENST00000462580 C14orf93Q9H972 538 aaKnown RBP8.82□□□□□ -1
TUBGCP3-203ENST00000462580 NPHP4O75161 1426 aaPredicted RBP8.81□□□□□ -1
TUBGCP3-203ENST00000462580 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.81□□□□□ -1
TUBGCP3-203ENST00000462580 YTHDC2Q9H6S0 1430 aaKnown RBP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 CPS1P31327 1500 aa8.8□□□□□ -1
TUBGCP3-203ENST00000462580 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 NUTM2BA6NNL0 878 aaPredicted RBP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 NUTM2EB1AL46 878 aaPredicted RBP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 NUTM2AQ8IVF1 878 aaPredicted RBP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
TUBGCP3-203ENST00000462580 STK26Q9P289 416 aa8.8□□□□□ -1
TUBGCP3-203ENST00000462580 PLEKHH1Q9ULM0 1364 aa8.8□□□□□ -1
TUBGCP3-203ENST00000462580 MYOM1P52179 1685 aa8.8□□□□□ -1
TUBGCP3-203ENST00000462580 NALCNQ8IZF0 1738 aa8.8□□□□□ -1
TUBGCP3-203ENST00000462580 NWD1Q149M9 1564 aa8.79□□□□□ -1
TUBGCP3-203ENST00000462580 C11orf95C9JLR9 678 aaPredicted RBP8.79□□□□□ -1
TUBGCP3-203ENST00000462580 MMP16P51512 607 aa8.79□□□□□ -1
TUBGCP3-203ENST00000462580 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
TUBGCP3-203ENST00000462580 TRAK1Q9UPV9 953 aa8.79□□□□□ -1
TUBGCP3-203ENST00000462580 EID1Q9Y6B2 187 aa8.79□□□□□ -1
TUBGCP3-203ENST00000462580 TULP4Q9NRJ4 1543 aa8.79□□□□□ -1
TUBGCP3-203ENST00000462580 ST20-MTHFSA0A0A6YYL1 179 aa8.78□□□□□ -1
TUBGCP3-203ENST00000462580 DXOO77932 396 aaKnown RBP8.78□□□□□ -1
TUBGCP3-203ENST00000462580 S1PR4O95977 384 aa8.78□□□□□ -1
TUBGCP3-203ENST00000462580 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -13e-7■■□□□ 12.5
TUBGCP3-203ENST00000462580 DESI1Q6ICB0 168 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms