RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CABP4P57796 275 aa14.85□□□□□ -0.03
SSBP1-202ENST00000461433 TMOD3Q9NYL9 352 aa14.85□□□□□ -0.03
SSBP1-202ENST00000461433 APBA3O96018 575 aa14.84□□□□□ -0.03
SSBP1-202ENST00000461433 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
SSBP1-202ENST00000461433 PAPPAQ13219 1627 aa14.84□□□□□ -0.03
SSBP1-202ENST00000461433 LY75O60449 1722 aa14.83□□□□□ -0.04
SSBP1-202ENST00000461433 LMOD3Q0VAK6 560 aa14.83□□□□□ -0.04
SSBP1-202ENST00000461433 ATG3Q9NT62 314 aa14.83□□□□□ -0.04
SSBP1-202ENST00000461433 ASAP1Q9ULH1 1129 aa14.83□□□□□ -0.04
SSBP1-202ENST00000461433 RGPD3A6NKT7 1758 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-202ENST00000461433 RGPD4Q7Z3J3 1758 aa14.82□□□□□ -0.04
SSBP1-202ENST00000461433 PLSCR1O15162 318 aa14.82□□□□□ -0.04
SSBP1-202ENST00000461433 TEFQ10587 303 aa14.82□□□□□ -0.04
SSBP1-202ENST00000461433 CCDC27Q2M243 656 aa14.82□□□□□ -0.04
SSBP1-202ENST00000461433 DEFB132Q7Z7B7 95 aa14.82□□□□□ -0.04
SSBP1-202ENST00000461433 EN1Q05925 392 aaPredicted RBP14.81□□□□□ -0.04
SSBP1-202ENST00000461433 SF3B2Q13435 895 aaKnown RBP14.81□□□□□ -0.04
SSBP1-202ENST00000461433 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
SSBP1-202ENST00000461433 PROM2Q8N271 834 aa14.81□□□□□ -0.04
SSBP1-202ENST00000461433 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
SSBP1-202ENST00000461433 CAMKK2Q96RR4 588 aa14.81□□□□□ -0.04
SSBP1-202ENST00000461433 UBR2Q8IWV8 1755 aa14.8□□□□□ -0.04
SSBP1-202ENST00000461433 SLC39A6Q13433 755 aa14.8□□□□□ -0.04
SSBP1-202ENST00000461433 TAF7Q15545 349 aaPredicted RBP14.8□□□□□ -0.04
SSBP1-202ENST00000461433 SALL2Q9Y467 1007 aaPredicted RBP14.8□□□□□ -0.04
SSBP1-202ENST00000461433 KDM3BQ7LBC6 1761 aa14.8□□□□□ -0.04
SSBP1-202ENST00000461433 BAG6P46379 1132 aa14.79□□□□□ -0.04
SSBP1-202ENST00000461433 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
SSBP1-202ENST00000461433 RREB1Q92766 1687 aa14.79□□□□□ -0.04
SSBP1-202ENST00000461433 BTBD11A6QL63 1104 aa14.78□□□□□ -0.04
SSBP1-202ENST00000461433 KCNQ3O43525 872 aa14.78□□□□□ -0.04
SSBP1-202ENST00000461433 EZH2Q15910 746 aaKnown RBP14.78□□□□□ -0.04
SSBP1-202ENST00000461433 NGEFQ8N5V2 710 aa14.78□□□□□ -0.04
SSBP1-202ENST00000461433 MIS18AQ9NYP9 233 aa14.78□□□□□ -0.04
SSBP1-202ENST00000461433 KCPQ6ZWJ8 1503 aa14.78□□□□□ -0.04
SSBP1-202ENST00000461433 ZNF790Q6PG37 636 aa14.77□□□□□ -0.04
SSBP1-202ENST00000461433 SMARCC1Q92922 1105 aaPredicted RBP14.77□□□□□ -0.04
SSBP1-202ENST00000461433 SLC4A9Q96Q91 983 aa14.77□□□□□ -0.04
SSBP1-202ENST00000461433 ZNF521Q96K83 1311 aa14.77□□□□□ -0.04
SSBP1-202ENST00000461433 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.05
SSBP1-202ENST00000461433 ZNF853P0CG23 659 aa14.77□□□□□ -0.05
SSBP1-202ENST00000461433 CHL1O00533 1208 aa14.76□□□□□ -0.05
SSBP1-202ENST00000461433 TXNRD1Q16881 649 aa14.76□□□□□ -0.05
SSBP1-202ENST00000461433 LRRC4BQ9NT99 713 aa14.76□□□□□ -0.05
SSBP1-202ENST00000461433 KCNQ4P56696 695 aa14.75□□□□□ -0.05
SSBP1-202ENST00000461433 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
SSBP1-202ENST00000461433 TAF1LQ8IZX4 1826 aa14.75□□□□□ -0.05
SSBP1-202ENST00000461433 BABAM1Q9NWV8 329 aa14.75□□□□□ -0.05
SSBP1-202ENST00000461433 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
SSBP1-202ENST00000461433 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 PTCD1O75127 700 aaKnown RBP14.74□□□□□ -0.05
SSBP1-202ENST00000461433 SIK1P57059 783 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 WDR63Q8IWG1 891 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 ZNF496Q96IT1 587 aaPredicted RBP14.74□□□□□ -0.05
SSBP1-202ENST00000461433 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 TJP1Q07157 1748 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 SLC27A3Q5K4L6 730 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
SSBP1-202ENST00000461433 IFT57Q9NWB7 429 aa14.74□□□□□ -0.05
SSBP1-202ENST00000461433 IL16Q14005 1332 aa14.73□□□□□ -0.05
SSBP1-202ENST00000461433 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
SSBP1-202ENST00000461433 ITPK1Q13572 414 aa14.73□□□□□ -0.05
SSBP1-202ENST00000461433 TTC5Q8N0Z6 440 aa14.73□□□□□ -0.05
SSBP1-202ENST00000461433 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
SSBP1-202ENST00000461433 TSPYL4Q9UJ04 414 aa14.73□□□□□ -0.05
SSBP1-202ENST00000461433 CCNL1Q9UK58 526 aaPredicted RBP14.73□□□□□ -0.05
SSBP1-202ENST00000461433 LAS1LQ9Y4W2 734 aaKnown RBP14.73□□□□□ -0.05
SSBP1-202ENST00000461433 COL5A3P25940 1745 aaPredicted RBP14.72□□□□□ -0.05
SSBP1-202ENST00000461433 HEG1Q9ULI3 1381 aa14.72□□□□□ -0.05
SSBP1-202ENST00000461433 C5P01031 1676 aa14.72□□□□□ -0.05
SSBP1-202ENST00000461433 HNRNPUQ00839 825 aaKnown RBP eCLIP14.72□□□□□ -0.05
SSBP1-202ENST00000461433 MBIPQ9NS73 344 aa14.72□□□□□ -0.05
SSBP1-202ENST00000461433 ATP6V1AP38606 617 aa14.71□□□□□ -0.05
SSBP1-202ENST00000461433 EIF4A1P60842 406 aaKnown RBP14.71□□□□□ -0.05
SSBP1-202ENST00000461433 GNAI1P63096 354 aa14.71□□□□□ -0.05
SSBP1-202ENST00000461433 VSIG10Q8N0Z9 540 aa14.71□□□□□ -0.06
SSBP1-202ENST00000461433 FMNL2Q96PY5 1086 aa14.71□□□□□ -0.06
SSBP1-202ENST00000461433 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
SSBP1-202ENST00000461433 DNAJC10Q8IXB1 793 aa14.69□□□□□ -0.06
SSBP1-202ENST00000461433 LINC00116Q8NCU8 138 aa14.69□□□□□ -0.06
SSBP1-202ENST00000461433 TSR2Q969E8 191 aaKnown RBP14.69□□□□□ -0.06
SSBP1-202ENST00000461433 C4BP0C0L5 1744 aa14.69□□□□□ -0.06
SSBP1-202ENST00000461433 MYH14Q7Z406 1995 aaKnown RBP14.69□□□□□ -0.06
SSBP1-202ENST00000461433 KRT24Q2M2I5 525 aa14.68□□□□□ -0.06
SSBP1-202ENST00000461433 GIGYF1O75420 1035 aaPredicted RBP14.68□□□□□ -0.06
SSBP1-202ENST00000461433 GOLGA2Q08379 1002 aa14.68□□□□□ -0.06
SSBP1-202ENST00000461433 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
SSBP1-202ENST00000461433 LAMB4A4D0S4 1761 aa14.67□□□□□ -0.06
SSBP1-202ENST00000461433 SNRPA1P09661 255 aaKnown RBP14.67□□□□□ -0.06
SSBP1-202ENST00000461433 CYP19A1P11511 503 aaPredicted RBP14.67□□□□□ -0.06
SSBP1-202ENST00000461433 SLFN5Q08AF3 891 aa14.67□□□□□ -0.06
SSBP1-202ENST00000461433 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
SSBP1-202ENST00000461433 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
SSBP1-202ENST00000461433 USP16Q9Y5T5 823 aa14.67□□□□□ -0.06
SSBP1-202ENST00000461433 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
SSBP1-202ENST00000461433 TUBGCP6Q96RT7 1819 aa14.66□□□□□ -0.06
SSBP1-202ENST00000461433 ZNF827Q17R98 1081 aa14.66□□□□□ -0.06
SSBP1-202ENST00000461433 TRMT2AQ8IZ69 625 aaKnown RBP14.66□□□□□ -0.06
SSBP1-202ENST00000461433 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
SSBP1-202ENST00000461433 C8orf58Q8NAV2 365 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms