RNA–Protein interactions for RNA: ENST00000460352.1

MMP11-205, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-205ENST00000460352 TTC5Q8N0Z6 440 aa21.93■■□□□ 1.1
MMP11-205ENST00000460352 SYTL4Q96C24 671 aaPredicted RBP21.93■■□□□ 1.1
MMP11-205ENST00000460352 BCL9O00512 1426 aa21.92■■□□□ 1.1
MMP11-205ENST00000460352 CHL1O00533 1208 aa21.92■■□□□ 1.1
MMP11-205ENST00000460352 ADAMTS7Q9UKP4 1686 aa21.91■■□□□ 1.1
MMP11-205ENST00000460352 KDM6AO15550 1401 aaPredicted RBP21.91■■□□□ 1.1
MMP11-205ENST00000460352 HMGB2P26583 209 aaKnown RBP21.91■■□□□ 1.1
MMP11-205ENST00000460352 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
MMP11-205ENST00000460352 PRIM1P49642 420 aaKnown RBP21.89■■□□□ 1.09
MMP11-205ENST00000460352 SMARCC1Q92922 1105 aaPredicted RBP21.89■■□□□ 1.09
MMP11-205ENST00000460352 CT47B1P0C2W7 299 aaPredicted RBP21.88■■□□□ 1.09
MMP11-205ENST00000460352 SOS1Q07889 1333 aaPredicted RBP21.87■■□□□ 1.09
MMP11-205ENST00000460352 TRMT2AQ8IZ69 625 aaKnown RBP21.87■■□□□ 1.09
MMP11-205ENST00000460352 CDCA7LQ96GN5 454 aa21.87■■□□□ 1.09
MMP11-205ENST00000460352 MBIPQ9NS73 344 aa21.87■■□□□ 1.09
MMP11-205ENST00000460352 MRC1P22897 1456 aa21.87■■□□□ 1.09
MMP11-205ENST00000460352 BRWD3Q6RI45 1802 aa21.86■■□□□ 1.09
MMP11-205ENST00000460352 ZNF790Q6PG37 636 aa21.86■■□□□ 1.09
MMP11-205ENST00000460352 ACSBG1Q96GR2 724 aa21.86■■□□□ 1.09
MMP11-205ENST00000460352 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
MMP11-205ENST00000460352 DUSP27Q5VZP5 1158 aa21.85■■□□□ 1.09
MMP11-205ENST00000460352 RGS12O14924 1447 aa21.84■■□□□ 1.09
MMP11-205ENST00000460352 PIGBQ92521 554 aa21.84■■□□□ 1.09
MMP11-205ENST00000460352 ZNF428Q96B54 188 aa21.84■■□□□ 1.09
MMP11-205ENST00000460352 FMNL2Q96PY5 1086 aa21.84■■□□□ 1.09
MMP11-205ENST00000460352 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
MMP11-205ENST00000460352 MIS18AQ9NYP9 233 aa21.84■■□□□ 1.09
MMP11-205ENST00000460352 ITGB4P16144 1822 aa21.84■■□□□ 1.09
MMP11-205ENST00000460352 TSR2Q969E8 191 aaKnown RBP21.83■■□□□ 1.09
MMP11-205ENST00000460352 SIPA1L3O60292 1781 aaPredicted RBP21.83■■□□□ 1.09
MMP11-205ENST00000460352 DOT1LQ8TEK3 1739 aa21.83■■□□□ 1.08
MMP11-205ENST00000460352 TEX13AQ9BXU3 409 aaPredicted RBP21.82■■□□□ 1.08
MMP11-205ENST00000460352 SPINK5Q9NQ38 1064 aaPredicted RBP21.82■■□□□ 1.08
MMP11-205ENST00000460352 HOXB7P09629 217 aa21.81■■□□□ 1.08
MMP11-205ENST00000460352 EXOSC9Q06265 439 aaKnown RBP21.8■■□□□ 1.08
MMP11-205ENST00000460352 FAM182BQ5T319 152 aa21.8■■□□□ 1.08
MMP11-205ENST00000460352 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
MMP11-205ENST00000460352 EIF4A1P60842 406 aaKnown RBP21.79■■□□□ 1.08
MMP11-205ENST00000460352 TOGARAM1Q9Y4F4 1720 aa21.79■■□□□ 1.08
MMP11-205ENST00000460352 SLC39A6Q13433 755 aa21.78■■□□□ 1.08
MMP11-205ENST00000460352 SF3B2Q13435 895 aaKnown RBP21.78■■□□□ 1.08
MMP11-205ENST00000460352 TWISTNBQ3B726 338 aaPredicted RBP21.78■■□□□ 1.08
MMP11-205ENST00000460352 VSIG10Q8N0Z9 540 aa21.78■■□□□ 1.08
MMP11-205ENST00000460352 ATG3Q9NT62 314 aa21.78■■□□□ 1.08
MMP11-205ENST00000460352 NHSQ6T4R5 1651 aa21.78■■□□□ 1.08
MMP11-205ENST00000460352 KDM3BQ7LBC6 1761 aa21.77■■□□□ 1.08
MMP11-205ENST00000460352 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
MMP11-205ENST00000460352 KCNQ2O43526 872 aa21.76■■□□□ 1.07
MMP11-205ENST00000460352 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
MMP11-205ENST00000460352 ASAP1Q9ULH1 1129 aa21.76■■□□□ 1.07
MMP11-205ENST00000460352 PTCD1O75127 700 aaKnown RBP21.75■■□□□ 1.07
MMP11-205ENST00000460352 TRIM37O94972 964 aa21.75■■□□□ 1.07
MMP11-205ENST00000460352 STARD3NLO95772 234 aa21.74■■□□□ 1.07
MMP11-205ENST00000460352 CCDC30Q5VVM6 783 aa21.74■■□□□ 1.07
MMP11-205ENST00000460352 CCDC125Q86Z20 511 aa21.74■■□□□ 1.07
MMP11-205ENST00000460352 ZNF496Q96IT1 587 aaPredicted RBP21.74■■□□□ 1.07
MMP11-205ENST00000460352 STK31Q9BXU1 1019 aa21.74■■□□□ 1.07
MMP11-205ENST00000460352 ELL2O00472 640 aaPredicted RBP21.73■■□□□ 1.07
MMP11-205ENST00000460352 GIGYF1O75420 1035 aaPredicted RBP21.73■■□□□ 1.07
MMP11-205ENST00000460352 C8orf58Q8NAV2 365 aa21.73■■□□□ 1.07
MMP11-205ENST00000460352 HEG1Q9ULI3 1381 aa21.73■■□□□ 1.07
MMP11-205ENST00000460352 KCNQ3O43525 872 aa21.72■■□□□ 1.07
MMP11-205ENST00000460352 ALDH1L2Q3SY69 923 aa21.72■■□□□ 1.07
MMP11-205ENST00000460352 RCAN3Q9UKA8 241 aa21.72■■□□□ 1.07
MMP11-205ENST00000460352 PALLDQ8WX93 1383 aa21.72■■□□□ 1.07
MMP11-205ENST00000460352 VAMP4O75379 141 aa21.71■■□□□ 1.07
MMP11-205ENST00000460352 NPM2Q86SE8 214 aaKnown RBP21.71■■□□□ 1.07
MMP11-205ENST00000460352 PAPPAQ13219 1627 aa21.7■■□□□ 1.06
MMP11-205ENST00000460352 LOC102724428A0A0B4J2F2 783 aa21.7■■□□□ 1.06
MMP11-205ENST00000460352 SIK1P57059 783 aa21.7■■□□□ 1.06
MMP11-205ENST00000460352 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
MMP11-205ENST00000460352 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
MMP11-205ENST00000460352 BTAF1O14981 1849 aa21.7■■□□□ 1.06
MMP11-205ENST00000460352 APBA3O96018 575 aa21.69■■□□□ 1.06
MMP11-205ENST00000460352 ATP6V1AP38606 617 aa21.69■■□□□ 1.06
MMP11-205ENST00000460352 UBR2Q8IWV8 1755 aa21.69■■□□□ 1.06
MMP11-205ENST00000460352 PLSCR1O15162 318 aa21.68■■□□□ 1.06
MMP11-205ENST00000460352 EIF2S2P20042 333 aaKnown RBP21.68■■□□□ 1.06
MMP11-205ENST00000460352 SLC27A3Q5K4L6 730 aa21.68■■□□□ 1.06
MMP11-205ENST00000460352 DBF4Q9UBU7 674 aaPredicted RBP21.68■■□□□ 1.06
MMP11-205ENST00000460352 ERBB4Q15303 1308 aa21.67■■□□□ 1.06
MMP11-205ENST00000460352 TSPYL6Q8N831 410 aa21.67■■□□□ 1.06
MMP11-205ENST00000460352 IPO8O15397 1037 aaKnown RBP21.66■■□□□ 1.06
MMP11-205ENST00000460352 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
MMP11-205ENST00000460352 CCNL1Q9UK58 526 aaPredicted RBP21.66■■□□□ 1.06
MMP11-205ENST00000460352 CACNA1FO60840 1977 aa21.66■■□□□ 1.06
MMP11-205ENST00000460352 KCPQ6ZWJ8 1503 aa21.65■■□□□ 1.06
MMP11-205ENST00000460352 BAG6P46379 1132 aa21.65■■□□□ 1.06
MMP11-205ENST00000460352 RARSP54136 660 aaKnown RBP21.65■■□□□ 1.06
MMP11-205ENST00000460352 MS4A1P11836 297 aa21.64■■□□□ 1.05
MMP11-205ENST00000460352 CANXP27824 592 aaKnown RBP21.64■■□□□ 1.05
MMP11-205ENST00000460352 KRT24Q2M2I5 525 aa21.64■■□□□ 1.05
MMP11-205ENST00000460352 HYPKQ9NX55 129 aa21.64■■□□□ 1.05
MMP11-205ENST00000460352 ZNF831Q5JPB2 1677 aa21.63■■□□□ 1.05
MMP11-205ENST00000460352 KIF16BQ96L93 1317 aa21.63■■□□□ 1.05
MMP11-205ENST00000460352 USP16Q9Y5T5 823 aa21.62■■□□□ 1.05
MMP11-205ENST00000460352 SLC4A2P04920 1241 aa21.61■■□□□ 1.05
MMP11-205ENST00000460352 BRPF1P55201 1214 aaPredicted RBP21.61■■□□□ 1.05
MMP11-205ENST00000460352 PTF1AQ7RTS3 328 aa21.61■■□□□ 1.05
MMP11-205ENST00000460352 DNAJC10Q8IXB1 793 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms