RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PCDH11XQ9BZA7 1347 aa19.98■□□□□ 0.79
CMTM3-203ENST00000460097 PCDH11YQ9BZA8 1340 aa19.98■□□□□ 0.79
CMTM3-203ENST00000460097 PLEKHG2Q9H7P9 1386 aa19.98■□□□□ 0.79
CMTM3-203ENST00000460097 SOCS7O14512 581 aa19.98■□□□□ 0.79
CMTM3-203ENST00000460097 E9PSI1 815 aa19.97■□□□□ 0.79
CMTM3-203ENST00000460097 FCHSD2O94868 740 aa19.97■□□□□ 0.79
CMTM3-203ENST00000460097 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
CMTM3-203ENST00000460097 UPF1Q92900 1129 aaKnown RBP eCLIP19.96■□□□□ 0.794e-7■■■■■ 29.7
CMTM3-203ENST00000460097 CYP27B1O15528 508 aa19.95■□□□□ 0.78
CMTM3-203ENST00000460097 IFNL2Q8IZJ0 200 aa19.95■□□□□ 0.78
CMTM3-203ENST00000460097 BCL9O00512 1426 aa19.94■□□□□ 0.78
CMTM3-203ENST00000460097 PRKAR2BP31323 418 aa19.94■□□□□ 0.78
CMTM3-203ENST00000460097 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
CMTM3-203ENST00000460097 TRIM37O94972 964 aa19.93■□□□□ 0.78
CMTM3-203ENST00000460097 PHKG2P15735 406 aa19.93■□□□□ 0.78
CMTM3-203ENST00000460097 ZNF530Q6P9A1 599 aaPredicted RBP19.93■□□□□ 0.78
CMTM3-203ENST00000460097 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
CMTM3-203ENST00000460097 PKD1L3Q7Z443 1732 aa19.92■□□□□ 0.78
CMTM3-203ENST00000460097 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
CMTM3-203ENST00000460097 NKX1-1Q15270 411 aaPredicted RBP19.91■□□□□ 0.78
CMTM3-203ENST00000460097 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
CMTM3-203ENST00000460097 ACSBG1Q96GR2 724 aa19.91■□□□□ 0.78
CMTM3-203ENST00000460097 SHANK3Q9BYB0 1731 aa19.91■□□□□ 0.78
CMTM3-203ENST00000460097 MTHFSDQ2M296 383 aaKnown RBP19.9■□□□□ 0.78
CMTM3-203ENST00000460097 PHACTR3Q96KR7 559 aa19.9■□□□□ 0.78
CMTM3-203ENST00000460097 HSP90AB1P08238 724 aaKnown RBP19.89■□□□□ 0.77
CMTM3-203ENST00000460097 BCL11BQ9C0K0 894 aaPredicted RBP19.89■□□□□ 0.77
CMTM3-203ENST00000460097 ANTXR1Q9H6X2 564 aa19.89■□□□□ 0.77
CMTM3-203ENST00000460097 KCNQ2O43526 872 aa19.88■□□□□ 0.77
CMTM3-203ENST00000460097 RGS3P49796 1198 aa19.88■□□□□ 0.77
CMTM3-203ENST00000460097 AKAP4Q5JQC9 854 aa19.88■□□□□ 0.77
CMTM3-203ENST00000460097 GAS2L2Q8NHY3 880 aa19.88■□□□□ 0.77
CMTM3-203ENST00000460097 PRIM1P49642 420 aaKnown RBP19.88■□□□□ 0.77
CMTM3-203ENST00000460097 PLEKHF1Q96S99 279 aa19.88■□□□□ 0.77
CMTM3-203ENST00000460097 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
CMTM3-203ENST00000460097 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
CMTM3-203ENST00000460097 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
CMTM3-203ENST00000460097 CLUAP1Q96AJ1 413 aa19.86■□□□□ 0.77
CMTM3-203ENST00000460097 DCAF5Q96JK2 942 aa19.86■□□□□ 0.77
CMTM3-203ENST00000460097 APBA3O96018 575 aa19.85■□□□□ 0.77
CMTM3-203ENST00000460097 PTF1AQ7RTS3 328 aa19.85■□□□□ 0.77
CMTM3-203ENST00000460097 SBF2Q86WG5 1849 aa19.85■□□□□ 0.77
CMTM3-203ENST00000460097 MPRIPQ6WCQ1 1025 aa19.84■□□□□ 0.77
CMTM3-203ENST00000460097 IGHDP01880 384 aa19.83■□□□□ 0.77
CMTM3-203ENST00000460097 BAG6P46379 1132 aa19.83■□□□□ 0.77
CMTM3-203ENST00000460097 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.77
CMTM3-203ENST00000460097 GNAT3A8MTJ3 354 aa19.83■□□□□ 0.76
CMTM3-203ENST00000460097 TBC1D32Q96NH3 1257 aa19.83■□□□□ 0.76
CMTM3-203ENST00000460097 FSD2A1L4K1 749 aa19.82■□□□□ 0.76
CMTM3-203ENST00000460097 ERVV-2B6SEH9 535 aa19.82■□□□□ 0.76
CMTM3-203ENST00000460097 ISY1Q9ULR0 285 aaKnown RBP19.82■□□□□ 0.76
CMTM3-203ENST00000460097 DEFB132Q7Z7B7 95 aa19.81■□□□□ 0.76
CMTM3-203ENST00000460097 CCDC146Q8IYE0 955 aa19.81■□□□□ 0.76
CMTM3-203ENST00000460097 RUNDC1Q96C34 613 aa19.81■□□□□ 0.76
CMTM3-203ENST00000460097 LGR6Q9HBX8 967 aa19.8■□□□□ 0.76
CMTM3-203ENST00000460097 MAP3K5Q99683 1374 aa19.8■□□□□ 0.76
CMTM3-203ENST00000460097 PLSCR1O15162 318 aa19.8■□□□□ 0.76
CMTM3-203ENST00000460097 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
CMTM3-203ENST00000460097 EN1Q05925 392 aaPredicted RBP19.8■□□□□ 0.76
CMTM3-203ENST00000460097 TMOD3Q9NYL9 352 aa19.8■□□□□ 0.76
CMTM3-203ENST00000460097 NHSQ6T4R5 1651 aa19.79■□□□□ 0.76
CMTM3-203ENST00000460097 CABP4P57796 275 aa19.79■□□□□ 0.76
CMTM3-203ENST00000460097 NFE2L2Q16236 605 aa19.79■□□□□ 0.76
CMTM3-203ENST00000460097 PIGBQ92521 554 aa19.79■□□□□ 0.76
CMTM3-203ENST00000460097 KDM6AO15550 1401 aaPredicted RBP19.79■□□□□ 0.76
CMTM3-203ENST00000460097 DOT1LQ8TEK3 1739 aa19.79■□□□□ 0.76
CMTM3-203ENST00000460097 APAF1O14727 1248 aa19.78■□□□□ 0.76
CMTM3-203ENST00000460097 EIF5BO60841 1220 aaKnown RBP19.78■□□□□ 0.76
CMTM3-203ENST00000460097 BCAR3O75815 825 aa19.78■□□□□ 0.76
CMTM3-203ENST00000460097 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
CMTM3-203ENST00000460097 SPINK5Q9NQ38 1064 aaPredicted RBP19.78■□□□□ 0.76
CMTM3-203ENST00000460097 TNS1Q9HBL0 1735 aaKnown RBP19.77■□□□□ 0.76
CMTM3-203ENST00000460097 HTATSF1O43719 755 aaKnown RBP19.77■□□□□ 0.76
CMTM3-203ENST00000460097 IL17REQ8NFR9 667 aa19.77■□□□□ 0.76
CMTM3-203ENST00000460097 CAMKK2Q96RR4 588 aa19.77■□□□□ 0.76
CMTM3-203ENST00000460097 NFATC2IPQ8NCF5 419 aa19.76■□□□□ 0.75
CMTM3-203ENST00000460097 TOGARAM1Q9Y4F4 1720 aa19.76■□□□□ 0.75
CMTM3-203ENST00000460097 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
CMTM3-203ENST00000460097 EZH2Q15910 746 aaKnown RBP19.75■□□□□ 0.75
CMTM3-203ENST00000460097 CLCN1P35523 988 aa19.75■□□□□ 0.75
CMTM3-203ENST00000460097 RIPK4P57078 832 aa19.75■□□□□ 0.75
CMTM3-203ENST00000460097 SLC52A2Q9HAB3 445 aa19.75■□□□□ 0.75
CMTM3-203ENST00000460097 RRAGDQ9NQL2 400 aaPredicted RBP19.75■□□□□ 0.75
CMTM3-203ENST00000460097 SEC24BO95487 1268 aa19.74■□□□□ 0.75
CMTM3-203ENST00000460097 BTAF1O14981 1849 aa19.74■□□□□ 0.75
CMTM3-203ENST00000460097 ITGB4P16144 1822 aa19.74■□□□□ 0.75
CMTM3-203ENST00000460097 GOLGA6L3A6NEY3 463 aa19.73■□□□□ 0.75
CMTM3-203ENST00000460097 NEUROD2Q15784 382 aa19.73■□□□□ 0.75
CMTM3-203ENST00000460097 MCM10Q7L590 875 aa19.73■□□□□ 0.75
CMTM3-203ENST00000460097 TEFQ10587 303 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 DCTN1Q14203 1278 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 SMARCC1Q92922 1105 aaPredicted RBP19.72■□□□□ 0.75
CMTM3-203ENST00000460097 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 RRP7AQ9Y3A4 280 aaKnown RBP19.72■□□□□ 0.75
CMTM3-203ENST00000460097 SCN11AQ9UI33 1791 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 CCDC27Q2M243 656 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 WDR63Q8IWG1 891 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 WWC1Q8IX03 1113 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 ASAP1Q9ULH1 1129 aa19.72■□□□□ 0.75
CMTM3-203ENST00000460097 CEMIPQ8WUJ3 1361 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms