RNA–Protein interactions for RNA: ENST00000460072.5

THUMPD2-203, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 3,148 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-203ENST00000460072 IGSF1Q8N6C5 1336 aa9.84□□□□□ -0.83
THUMPD2-203ENST00000460072 FER1L6Q2WGJ9 1857 aa9.84□□□□□ -0.83
THUMPD2-203ENST00000460072 KCPQ6ZWJ8 1503 aa9.83□□□□□ -0.84
THUMPD2-203ENST00000460072 ANKRD31Q8N7Z5 1873 aa9.83□□□□□ -0.84
THUMPD2-203ENST00000460072 ERVV-2B6SEH9 535 aa9.83□□□□□ -0.84
THUMPD2-203ENST00000460072 SOX12O15370 315 aa9.83□□□□□ -0.84
THUMPD2-203ENST00000460072 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
THUMPD2-203ENST00000460072 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
THUMPD2-203ENST00000460072 LAMB4A4D0S4 1761 aa9.81□□□□□ -0.84
THUMPD2-203ENST00000460072 PHKG2P15735 406 aa9.81□□□□□ -0.84
THUMPD2-203ENST00000460072 AK7Q96M32 723 aa9.81□□□□□ -0.84
THUMPD2-203ENST00000460072 LINC00116Q8NCU8 138 aa9.81□□□□□ -0.84
THUMPD2-203ENST00000460072 COL11A2P13942 1736 aaPredicted RBP9.81□□□□□ -0.84
THUMPD2-203ENST00000460072 KIF3CO14782 793 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 PIGBQ92521 554 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 APLP1P51693 650 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 SIK1P57059 783 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 IFNL2Q8IZJ0 200 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
THUMPD2-203ENST00000460072 CCDC88AQ3V6T2 1871 aa9.79□□□□□ -0.84
THUMPD2-203ENST00000460072 NEUROD1Q13562 356 aa9.79□□□□□ -0.84
THUMPD2-203ENST00000460072 RBM46Q8TBY0 533 aaKnown RBP9.79□□□□□ -0.84
THUMPD2-203ENST00000460072 CARD14Q9BXL6 1004 aa9.79□□□□□ -0.84
THUMPD2-203ENST00000460072 ADAMTSL1Q8N6G6 1762 aa9.79□□□□□ -0.84
THUMPD2-203ENST00000460072 HSP90AB2PQ58FF8 381 aa9.79□□□□□ -0.84
THUMPD2-203ENST00000460072 RRS1Q15050 365 aaKnown RBP9.78□□□□□ -0.84
THUMPD2-203ENST00000460072 SCN4AP35499 1836 aa9.78□□□□□ -0.84
THUMPD2-203ENST00000460072 FSTL1Q12841 308 aa9.78□□□□□ -0.84
THUMPD2-203ENST00000460072 NLGN1Q8N2Q7 840 aa9.78□□□□□ -0.84
THUMPD2-203ENST00000460072 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
THUMPD2-203ENST00000460072 ATG3Q9NT62 314 aa9.78□□□□□ -0.84
THUMPD2-203ENST00000460072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 ITPK1Q13572 414 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 JMYQ8N9B5 988 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 LTV1Q96GA3 475 aaPredicted RBP9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 DCAF5Q96JK2 942 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 GGNBP2Q9H3C7 697 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 GPBP1L1Q9HC44 474 aaPredicted RBP9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 TMOD3Q9NYL9 352 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 RPS6KA4O75676 772 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 EYA1Q99502 592 aa9.77□□□□□ -0.85
THUMPD2-203ENST00000460072 AMIGO3Q86WK7 504 aa9.76□□□□□ -0.85
THUMPD2-203ENST00000460072 SYTL4Q96C24 671 aaPredicted RBP9.76□□□□□ -0.85
THUMPD2-203ENST00000460072 COL3A1P02461 1466 aaPredicted RBP9.76□□□□□ -0.85
THUMPD2-203ENST00000460072 CCDC87Q9NVE4 849 aa9.76□□□□□ -0.85
THUMPD2-203ENST00000460072 POLKQ9UBT6 870 aa9.76□□□□□ -0.85
THUMPD2-203ENST00000460072 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
THUMPD2-203ENST00000460072 RGL2O15211 777 aa9.75□□□□□ -0.85
THUMPD2-203ENST00000460072 USHBP1Q8N6Y0 703 aa9.75□□□□□ -0.85
THUMPD2-203ENST00000460072 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
THUMPD2-203ENST00000460072 TOMM70O94826 608 aa9.74□□□□□ -0.85
THUMPD2-203ENST00000460072 DNAJC5GQ8N7S2 189 aa9.74□□□□□ -0.85
THUMPD2-203ENST00000460072 EMILIN1Q9Y6C2 1016 aa9.74□□□□□ -0.85
THUMPD2-203ENST00000460072 EIF4A2Q14240 407 aaKnown RBP9.74□□□□□ -0.85
THUMPD2-203ENST00000460072 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 USP42Q9H9J4 1324 aaKnown RBP9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 GYS1P13807 737 aa9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 KCNQ4P56696 695 aa9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 KCNA3P22001 575 aa9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 MSL1Q68DK7 614 aa9.73□□□□□ -0.85
THUMPD2-203ENST00000460072 KDM3BQ7LBC6 1761 aa9.72□□□□□ -0.85
THUMPD2-203ENST00000460072 PLEKHO1Q53GL0 409 aaPredicted RBP9.72□□□□□ -0.85
THUMPD2-203ENST00000460072 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
THUMPD2-203ENST00000460072 GNPATO15228 680 aa9.72□□□□□ -0.85
THUMPD2-203ENST00000460072 TRAPPC3LQ5T215 181 aa9.72□□□□□ -0.85
THUMPD2-203ENST00000460072 VSIG10Q8N0Z9 540 aa9.72□□□□□ -0.85
THUMPD2-203ENST00000460072 ATP6V1AP38606 617 aa9.71□□□□□ -0.85
THUMPD2-203ENST00000460072 SOS1Q07889 1333 aaPredicted RBP9.71□□□□□ -0.85
THUMPD2-203ENST00000460072 MMP10P09238 476 aa9.71□□□□□ -0.85
THUMPD2-203ENST00000460072 TM4SF1P30408 202 aa9.71□□□□□ -0.85
THUMPD2-203ENST00000460072 CACNA1SQ13698 1873 aa9.71□□□□□ -0.85
THUMPD2-203ENST00000460072 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.85
THUMPD2-203ENST00000460072 LTBP3Q9NS15 1303 aa9.71□□□□□ -0.86
THUMPD2-203ENST00000460072 RIC1Q4ADV7 1423 aa9.7□□□□□ -0.86
THUMPD2-203ENST00000460072 FBLN1P23142 703 aa9.7□□□□□ -0.86
THUMPD2-203ENST00000460072 MSH5O43196 834 aa9.7□□□□□ -0.86
THUMPD2-203ENST00000460072 ARHGEF1Q92888 912 aaKnown RBP9.7□□□□□ -0.86
THUMPD2-203ENST00000460072 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
THUMPD2-203ENST00000460072 KLHL34Q8N239 644 aa9.69□□□□□ -0.86
THUMPD2-203ENST00000460072 PARP3Q9Y6F1 533 aa9.69□□□□□ -0.86
THUMPD2-203ENST00000460072 POLRMTO00411 1230 aaKnown RBP9.68□□□□□ -0.86
THUMPD2-203ENST00000460072 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
THUMPD2-203ENST00000460072 GTF3C3Q9Y5Q9 886 aa9.68□□□□□ -0.86
THUMPD2-203ENST00000460072 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
THUMPD2-203ENST00000460072 DPEP1P16444 411 aa9.67□□□□□ -0.86
THUMPD2-203ENST00000460072 INTS5Q6P9B9 1019 aaKnown RBP9.67□□□□□ -0.86
THUMPD2-203ENST00000460072 PIM2Q9P1W9 311 aa9.67□□□□□ -0.86
THUMPD2-203ENST00000460072 ANKRD36CQ5JPF3 1778 aa9.67□□□□□ -0.86
THUMPD2-203ENST00000460072 IL13P35225 146 aa9.67□□□□□ -0.86
THUMPD2-203ENST00000460072 COL15A1P39059 1388 aa9.67□□□□□ -0.86
THUMPD2-203ENST00000460072 TRPM7Q96QT4 1865 aa9.66□□□□□ -0.86
THUMPD2-203ENST00000460072 DDR1Q08345 913 aa9.66□□□□□ -0.86
THUMPD2-203ENST00000460072 RFC4P35249 363 aa9.66□□□□□ -0.86
THUMPD2-203ENST00000460072 CRKLP46109 303 aaKnown RBP9.66□□□□□ -0.86
THUMPD2-203ENST00000460072 DALRD3Q5D0E6 543 aaKnown RBP9.66□□□□□ -0.86
THUMPD2-203ENST00000460072 NARFQ9UHQ1 456 aa9.66□□□□□ -0.86
THUMPD2-203ENST00000460072 DDX60Q8IY21 1712 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms