RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
UBR4-208ENST00000459947 PIGBQ92521 554 aa14.1□□□□□ -0.15
UBR4-208ENST00000459947 BABAM1Q9NWV8 329 aa14.1□□□□□ -0.15
UBR4-208ENST00000459947 CEMIPQ8WUJ3 1361 aa14.1□□□□□ -0.15
UBR4-208ENST00000459947 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
UBR4-208ENST00000459947 CCNL1Q9UK58 526 aaPredicted RBP14.1□□□□□ -0.15
UBR4-208ENST00000459947 FLAD1Q8NFF5 587 aa14.09□□□□□ -0.15
UBR4-208ENST00000459947 PAPPAQ13219 1627 aa14.09□□□□□ -0.15
UBR4-208ENST00000459947 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
UBR4-208ENST00000459947 TEX13AQ9BXU3 409 aaPredicted RBP14.08□□□□□ -0.16
UBR4-208ENST00000459947 C5P01031 1676 aa14.07□□□□□ -0.16
UBR4-208ENST00000459947 PHACTR3Q96KR7 559 aa14.07□□□□□ -0.16
UBR4-208ENST00000459947 VSIG10Q8N0Z9 540 aa14.07□□□□□ -0.16
UBR4-208ENST00000459947 SIPA1L3O60292 1781 aaPredicted RBP14.07□□□□□ -0.16
UBR4-208ENST00000459947 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
UBR4-208ENST00000459947 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
UBR4-208ENST00000459947 SIK1P57059 783 aa14.06□□□□□ -0.16
UBR4-208ENST00000459947 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
UBR4-208ENST00000459947 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
UBR4-208ENST00000459947 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
UBR4-208ENST00000459947 SLC15A2Q16348 729 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
UBR4-208ENST00000459947 DLG5Q8TDM6 1919 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
UBR4-208ENST00000459947 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 RIPK4P57078 832 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 LGR6Q9HBX8 967 aa14.04□□□□□ -0.16
UBR4-208ENST00000459947 TAF1LQ8IZX4 1826 aa14.03□□□□□ -0.16
UBR4-208ENST00000459947 CHMP4AQ9BY43 222 aa14.03□□□□□ -0.16
UBR4-208ENST00000459947 UBR2Q8IWV8 1755 aa14.03□□□□□ -0.16
UBR4-208ENST00000459947 CNTNAP4Q9C0A0 1308 aa14.03□□□□□ -0.16
UBR4-208ENST00000459947 PROM2Q8N271 834 aa14.03□□□□□ -0.16
UBR4-208ENST00000459947 ATP6V1AP38606 617 aa14.02□□□□□ -0.16
UBR4-208ENST00000459947 AK7Q96M32 723 aa14.02□□□□□ -0.16
UBR4-208ENST00000459947 FMNL2Q96PY5 1086 aa14.02□□□□□ -0.16
UBR4-208ENST00000459947 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.16
UBR4-208ENST00000459947 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.17
UBR4-208ENST00000459947 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
UBR4-208ENST00000459947 BTBD11A6QL63 1104 aa14.02□□□□□ -0.17
UBR4-208ENST00000459947 ADRA2BP18089 450 aa14.02□□□□□ -0.17
UBR4-208ENST00000459947 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
UBR4-208ENST00000459947 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
UBR4-208ENST00000459947 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
UBR4-208ENST00000459947 ZNF790Q6PG37 636 aa14□□□□□ -0.17
UBR4-208ENST00000459947 SSFA2P28290 1259 aa14□□□□□ -0.17
UBR4-208ENST00000459947 LRP5O75197 1615 aa14□□□□□ -0.17
UBR4-208ENST00000459947 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
UBR4-208ENST00000459947 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
UBR4-208ENST00000459947 STARD3NLO95772 234 aa14□□□□□ -0.17
UBR4-208ENST00000459947 HEG1Q9ULI3 1381 aa13.99□□□□□ -0.17
UBR4-208ENST00000459947 LRRC4BQ9NT99 713 aa13.99□□□□□ -0.17
UBR4-208ENST00000459947 KDM3BQ7LBC6 1761 aa13.99□□□□□ -0.17
UBR4-208ENST00000459947 CASZ1Q86V15 1759 aa13.98□□□□□ -0.17
UBR4-208ENST00000459947 R3HDM1Q15032 1099 aaKnown RBP13.98□□□□□ -0.17
UBR4-208ENST00000459947 CCDC146Q8IYE0 955 aa13.98□□□□□ -0.17
UBR4-208ENST00000459947 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
UBR4-208ENST00000459947 TJP1Q07157 1748 aa13.98□□□□□ -0.17
UBR4-208ENST00000459947 MCM10Q7L590 875 aa13.98□□□□□ -0.17
UBR4-208ENST00000459947 SOS1Q07889 1333 aaPredicted RBP13.98□□□□□ -0.17
UBR4-208ENST00000459947 A0A087WZG4 1122 aa13.98□□□□□ -0.17
UBR4-208ENST00000459947 IL16Q14005 1332 aa13.97□□□□□ -0.17
UBR4-208ENST00000459947 GNAI1P63096 354 aa13.97□□□□□ -0.17
UBR4-208ENST00000459947 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
UBR4-208ENST00000459947 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
UBR4-208ENST00000459947 SNRPA1P09661 255 aaKnown RBP13.96□□□□□ -0.17
UBR4-208ENST00000459947 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
UBR4-208ENST00000459947 APAF1O14727 1248 aa13.96□□□□□ -0.17
UBR4-208ENST00000459947 RPS6KA4O75676 772 aa13.96□□□□□ -0.17
UBR4-208ENST00000459947 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.17
UBR4-208ENST00000459947 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.18
UBR4-208ENST00000459947 CCDC87Q9NVE4 849 aa13.96□□□□□ -0.18
UBR4-208ENST00000459947 LAMB4A4D0S4 1761 aa13.96□□□□□ -0.18
UBR4-208ENST00000459947 MTFR1LQ9H019 292 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 IFT57Q9NWB7 429 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 TSPYL4Q9UJ04 414 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 RGL2O15211 777 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 HOXB7P09629 217 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 ITPK1Q13572 414 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 LINC00116Q8NCU8 138 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 UBR3Q6ZT12 1888 aa13.95□□□□□ -0.18
UBR4-208ENST00000459947 ZNF827Q17R98 1081 aa13.94□□□□□ -0.18
UBR4-208ENST00000459947 SLC39A6Q13433 755 aa13.94□□□□□ -0.18
UBR4-208ENST00000459947 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
UBR4-208ENST00000459947 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 GNPATO15228 680 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 POLD1P28340 1107 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 WDR63Q8IWG1 891 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
UBR4-208ENST00000459947 DCTN1Q14203 1278 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 CCDC184Q52MB2 194 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 TRAPPC3LQ5T215 181 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 PNPLA7Q6ZV29 1317 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 DNAJC10Q8IXB1 793 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 TUBGCP6Q96RT7 1819 aa13.93□□□□□ -0.18
UBR4-208ENST00000459947 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
UBR4-208ENST00000459947 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms