RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 CABP4P57796 275 aa19.55■□□□□ 0.72
VPS16-205ENST00000453689 ZNF827Q17R98 1081 aa19.55■□□□□ 0.72
VPS16-205ENST00000453689 FCHSD2O94868 740 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 AKT1S1Q96B36 256 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 ATG3Q9NT62 314 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 UBR2Q8IWV8 1755 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 TJP1Q07157 1748 aa19.54■□□□□ 0.72
VPS16-205ENST00000453689 RNMTO43148 476 aaKnown RBP19.53■□□□□ 0.72
VPS16-205ENST00000453689 GAS2L2Q8NHY3 880 aa19.53■□□□□ 0.72
VPS16-205ENST00000453689 PDGFDQ9GZP0 370 aaPredicted RBP19.53■□□□□ 0.72
VPS16-205ENST00000453689 CICQ96RK0 1608 aaPredicted RBP19.53■□□□□ 0.72
VPS16-205ENST00000453689 MAP3K5Q99683 1374 aa19.53■□□□□ 0.72
VPS16-205ENST00000453689 COL24A1Q17RW2 1714 aa19.52■□□□□ 0.72
VPS16-205ENST00000453689 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.72
VPS16-205ENST00000453689 LOC102724428A0A0B4J2F2 783 aa19.51■□□□□ 0.71
VPS16-205ENST00000453689 SIK1P57059 783 aa19.51■□□□□ 0.71
VPS16-205ENST00000453689 MYH14Q7Z406 1995 aaKnown RBP19.51■□□□□ 0.71
VPS16-205ENST00000453689 SLC52A2Q9HAB3 445 aa19.5■□□□□ 0.71
VPS16-205ENST00000453689 GNAT3A8MTJ3 354 aa19.49■□□□□ 0.71
VPS16-205ENST00000453689 IL17REQ8NFR9 667 aa19.47■□□□□ 0.71
VPS16-205ENST00000453689 RBM42Q9BTD8 480 aaKnown RBP19.47■□□□□ 0.71
VPS16-205ENST00000453689 TFCP2L1Q9NZI6 479 aa19.47■□□□□ 0.71
VPS16-205ENST00000453689 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
VPS16-205ENST00000453689 HMGB2P26583 209 aaKnown RBP19.46■□□□□ 0.71
VPS16-205ENST00000453689 ATP6V1AP38606 617 aa19.46■□□□□ 0.71
VPS16-205ENST00000453689 ITPK1Q13572 414 aa19.46■□□□□ 0.71
VPS16-205ENST00000453689 SLC4A9Q96Q91 983 aa19.46■□□□□ 0.71
VPS16-205ENST00000453689 PLEKHF1Q96S99 279 aa19.46■□□□□ 0.71
VPS16-205ENST00000453689 KCPQ6ZWJ8 1503 aa19.46■□□□□ 0.71
VPS16-205ENST00000453689 CEMIPQ8WUJ3 1361 aa19.45■□□□□ 0.7
VPS16-205ENST00000453689 LINC00116Q8NCU8 138 aa19.45■□□□□ 0.7
VPS16-205ENST00000453689 SPON1Q9HCB6 807 aa19.45■□□□□ 0.7
VPS16-205ENST00000453689 ZBTB7AO95365 584 aa19.44■□□□□ 0.7
VPS16-205ENST00000453689 C4AP0C0L4 1744 aa19.44■□□□□ 0.7
VPS16-205ENST00000453689 PTCD1O75127 700 aaKnown RBP19.43■□□□□ 0.7
VPS16-205ENST00000453689 NEFMP07197 916 aa19.43■□□□□ 0.7
VPS16-205ENST00000453689 SLC39A6Q13433 755 aa19.43■□□□□ 0.7
VPS16-205ENST00000453689 SRCAPQ6ZRS2 3230 aa19.43■□□□□ 0.7
VPS16-205ENST00000453689 TEFQ10587 303 aa19.42■□□□□ 0.7
VPS16-205ENST00000453689 AK7Q96M32 723 aa19.42■□□□□ 0.7
VPS16-205ENST00000453689 PNNQ9H307 717 aaKnown RBP19.42■□□□□ 0.7
VPS16-205ENST00000453689 KDM3BQ7LBC6 1761 aa19.42■□□□□ 0.7
VPS16-205ENST00000453689 MTFR1LQ9H019 292 aa19.41■□□□□ 0.7
VPS16-205ENST00000453689 ATF5Q9Y2D1 282 aaPredicted RBP19.41■□□□□ 0.7
VPS16-205ENST00000453689 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
VPS16-205ENST00000453689 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
VPS16-205ENST00000453689 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
VPS16-205ENST00000453689 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
VPS16-205ENST00000453689 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
VPS16-205ENST00000453689 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
VPS16-205ENST00000453689 NFE2L2Q16236 605 aa19.39■□□□□ 0.69
VPS16-205ENST00000453689 MCM10Q7L590 875 aa19.39■□□□□ 0.69
VPS16-205ENST00000453689 MIER1Q8N108 512 aa19.39■□□□□ 0.69
VPS16-205ENST00000453689 SLC16A10Q8TF71 515 aa19.39■□□□□ 0.69
VPS16-205ENST00000453689 MRS2Q9HD23 443 aa19.39■□□□□ 0.69
VPS16-205ENST00000453689 CCER2I3L3R5 266 aa19.38■□□□□ 0.69
VPS16-205ENST00000453689 PTGER2P43116 358 aa19.38■□□□□ 0.69
VPS16-205ENST00000453689 DCTN1Q14203 1278 aa19.38■□□□□ 0.69
VPS16-205ENST00000453689 CCDC184Q52MB2 194 aa19.38■□□□□ 0.69
VPS16-205ENST00000453689 CNTNAP4Q9C0A0 1308 aa19.37■□□□□ 0.69
VPS16-205ENST00000453689 GNPATO15228 680 aa19.37■□□□□ 0.69
VPS16-205ENST00000453689 MSH5O43196 834 aa19.37■□□□□ 0.69
VPS16-205ENST00000453689 SMIM5Q71RC9 77 aa19.37■□□□□ 0.69
VPS16-205ENST00000453689 FLAD1Q8NFF5 587 aa19.37■□□□□ 0.69
VPS16-205ENST00000453689 PHF14O94880 888 aa19.36■□□□□ 0.69
VPS16-205ENST00000453689 SGIP1Q9BQI5 828 aa19.36■□□□□ 0.69
VPS16-205ENST00000453689 ADAMTS8Q9UP79 889 aa19.36■□□□□ 0.69
VPS16-205ENST00000453689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
VPS16-205ENST00000453689 SSFA2P28290 1259 aa19.35■□□□□ 0.69
VPS16-205ENST00000453689 RC3H1Q5TC82 1133 aaKnown RBP19.35■□□□□ 0.69
VPS16-205ENST00000453689 ZNF790Q6PG37 636 aa19.35■□□□□ 0.69
VPS16-205ENST00000453689 CCDC146Q8IYE0 955 aa19.35■□□□□ 0.69
VPS16-205ENST00000453689 TTC5Q8N0Z6 440 aa19.35■□□□□ 0.69
VPS16-205ENST00000453689 PPP1R1BQ9UD71 204 aaPredicted RBP19.35■□□□□ 0.69
VPS16-205ENST00000453689 LAMB4A4D0S4 1761 aa19.34■□□□□ 0.69
VPS16-205ENST00000453689 BTBD11A6QL63 1104 aa19.34■□□□□ 0.69
VPS16-205ENST00000453689 DNAJC10Q8IXB1 793 aa19.34■□□□□ 0.69
VPS16-205ENST00000453689 CRKLP46109 303 aaKnown RBP19.33■□□□□ 0.68
VPS16-205ENST00000453689 VSIG10Q8N0Z9 540 aa19.33■□□□□ 0.68
VPS16-205ENST00000453689 KCNQ3O43525 872 aa19.32■□□□□ 0.68
VPS16-205ENST00000453689 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
VPS16-205ENST00000453689 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
VPS16-205ENST00000453689 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
VPS16-205ENST00000453689 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
VPS16-205ENST00000453689 HEG1Q9ULI3 1381 aa19.32■□□□□ 0.68
VPS16-205ENST00000453689 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
VPS16-205ENST00000453689 RIPK4P57078 832 aa19.31■□□□□ 0.68
VPS16-205ENST00000453689 CYP19A1P11511 503 aaPredicted RBP19.3■□□□□ 0.68
VPS16-205ENST00000453689 TAF7Q15545 349 aaPredicted RBP19.3■□□□□ 0.68
VPS16-205ENST00000453689 MSL1Q68DK7 614 aa19.3■□□□□ 0.68
VPS16-205ENST00000453689 INTS5Q6P9B9 1019 aaKnown RBP19.3■□□□□ 0.68
VPS16-205ENST00000453689 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
VPS16-205ENST00000453689 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
VPS16-205ENST00000453689 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
VPS16-205ENST00000453689 CCDC87Q9NVE4 849 aa19.29■□□□□ 0.68
VPS16-205ENST00000453689 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
VPS16-205ENST00000453689 ADRA2BP18089 450 aa19.28■□□□□ 0.68
VPS16-205ENST00000453689 TRAPPC3LQ5T215 181 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms