RNA–Protein interactions for RNA: ENST00000452413.1

KCTD3-203, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 3

Gene KCTD3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-203ENST00000452413 NHSQ6T4R5 1651 aa13.02□□□□□ -0.32
KCTD3-203ENST00000452413 RIPK4P57078 832 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 NPM2Q86SE8 214 aaKnown RBP13.02□□□□□ -0.33
KCTD3-203ENST00000452413 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 AK7Q96M32 723 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 ASAP1Q9ULH1 1129 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.33
KCTD3-203ENST00000452413 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
KCTD3-203ENST00000452413 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
KCTD3-203ENST00000452413 MCM10Q7L590 875 aa13.01□□□□□ -0.33
KCTD3-203ENST00000452413 ATG3Q9NT62 314 aa13.01□□□□□ -0.33
KCTD3-203ENST00000452413 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
KCTD3-203ENST00000452413 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
KCTD3-203ENST00000452413 HTATSF1O43719 755 aaKnown RBP13□□□□□ -0.33
KCTD3-203ENST00000452413 SIK1P57059 783 aa13□□□□□ -0.33
KCTD3-203ENST00000452413 SLC15A2Q16348 729 aa13□□□□□ -0.33
KCTD3-203ENST00000452413 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
KCTD3-203ENST00000452413 FAM9BQ8IZU0 186 aa13□□□□□ -0.33
KCTD3-203ENST00000452413 PROM2Q8N271 834 aa13□□□□□ -0.33
KCTD3-203ENST00000452413 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
KCTD3-203ENST00000452413 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
KCTD3-203ENST00000452413 LAS1LQ9Y4W2 734 aaKnown RBP12.99□□□□□ -0.33
KCTD3-203ENST00000452413 SBF2Q86WG5 1849 aa12.99□□□□□ -0.33
KCTD3-203ENST00000452413 SLC39A6Q13433 755 aa12.98□□□□□ -0.33
KCTD3-203ENST00000452413 DCTN1Q14203 1278 aa12.98□□□□□ -0.33
KCTD3-203ENST00000452413 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
KCTD3-203ENST00000452413 KDM6AO15550 1401 aaPredicted RBP12.97□□□□□ -0.33
KCTD3-203ENST00000452413 BTAF1O14981 1849 aa12.97□□□□□ -0.33
KCTD3-203ENST00000452413 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
KCTD3-203ENST00000452413 PHF14O94880 888 aa12.97□□□□□ -0.33
KCTD3-203ENST00000452413 IL17REQ8NFR9 667 aa12.97□□□□□ -0.33
KCTD3-203ENST00000452413 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
KCTD3-203ENST00000452413 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
KCTD3-203ENST00000452413 TMPOP42166 694 aaKnown RBP12.96□□□□□ -0.33
KCTD3-203ENST00000452413 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.33
KCTD3-203ENST00000452413 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.33
KCTD3-203ENST00000452413 ARXQ96QS3 562 aa12.96□□□□□ -0.33
KCTD3-203ENST00000452413 GNPATO15228 680 aa12.95□□□□□ -0.34
KCTD3-203ENST00000452413 STARD3NLO95772 234 aa12.95□□□□□ -0.34
KCTD3-203ENST00000452413 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
KCTD3-203ENST00000452413 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
KCTD3-203ENST00000452413 APAF1O14727 1248 aa12.94□□□□□ -0.34
KCTD3-203ENST00000452413 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
KCTD3-203ENST00000452413 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
KCTD3-203ENST00000452413 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
KCTD3-203ENST00000452413 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
KCTD3-203ENST00000452413 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
KCTD3-203ENST00000452413 ZBTB7AO95365 584 aa12.93□□□□□ -0.34
KCTD3-203ENST00000452413 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
KCTD3-203ENST00000452413 POLD1P28340 1107 aa12.93□□□□□ -0.34
KCTD3-203ENST00000452413 CCDC184Q52MB2 194 aa12.93□□□□□ -0.34
KCTD3-203ENST00000452413 TRAPPC3LQ5T215 181 aa12.93□□□□□ -0.34
KCTD3-203ENST00000452413 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
KCTD3-203ENST00000452413 ANO8Q9HCE9 1232 aaPredicted RBP12.93□□□□□ -0.34
KCTD3-203ENST00000452413 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
KCTD3-203ENST00000452413 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
KCTD3-203ENST00000452413 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
KCTD3-203ENST00000452413 RFC4P35249 363 aa12.92□□□□□ -0.34
KCTD3-203ENST00000452413 ZNF827Q17R98 1081 aa12.92□□□□□ -0.34
KCTD3-203ENST00000452413 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
KCTD3-203ENST00000452413 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
KCTD3-203ENST00000452413 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
KCTD3-203ENST00000452413 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
KCTD3-203ENST00000452413 ITPK1Q13572 414 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 DNAJC10Q8IXB1 793 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 LINC00116Q8NCU8 138 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 TOGARAM1Q9Y4F4 1720 aa12.91□□□□□ -0.34
KCTD3-203ENST00000452413 ITGB4P16144 1822 aa12.9□□□□□ -0.34
KCTD3-203ENST00000452413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
KCTD3-203ENST00000452413 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
KCTD3-203ENST00000452413 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
KCTD3-203ENST00000452413 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
KCTD3-203ENST00000452413 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
KCTD3-203ENST00000452413 RREB1Q92766 1687 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 EP400Q96L91 3159 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 NUP188Q5SRE5 1749 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 ZPR1O75312 459 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
KCTD3-203ENST00000452413 SLC16A10Q8TF71 515 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 CCDC87Q9NVE4 849 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
KCTD3-203ENST00000452413 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
KCTD3-203ENST00000452413 SSFA2P28290 1259 aa12.88□□□□□ -0.35
KCTD3-203ENST00000452413 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
KCTD3-203ENST00000452413 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
KCTD3-203ENST00000452413 PNPLA7Q6ZV29 1317 aa12.88□□□□□ -0.35
KCTD3-203ENST00000452413 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
KCTD3-203ENST00000452413 KCNQ3O43525 872 aa12.87□□□□□ -0.35
KCTD3-203ENST00000452413 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
KCTD3-203ENST00000452413 COL23A1Q86Y22 540 aaPredicted RBP12.87□□□□□ -0.35
KCTD3-203ENST00000452413 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
KCTD3-203ENST00000452413 A0A087WZG4 1122 aa12.86□□□□□ -0.35
KCTD3-203ENST00000452413 NPHP1O15259 732 aa12.86□□□□□ -0.35
KCTD3-203ENST00000452413 GNAI1P63096 354 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms