RNA–Protein interactions for RNA: ENST00000450643.5

RHBDF1-206, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-206ENST00000450643 UPF1Q92900 1129 aaKnown RBP eCLIP22.36■■□□□ 1.17
RHBDF1-206ENST00000450643 CEMIPQ8WUJ3 1361 aa22.36■■□□□ 1.17
RHBDF1-206ENST00000450643 CCDC125Q86Z20 511 aa22.35■■□□□ 1.17
RHBDF1-206ENST00000450643 PAPPAQ13219 1627 aa22.35■■□□□ 1.17
RHBDF1-206ENST00000450643 BAG6P46379 1132 aa22.34■■□□□ 1.17
RHBDF1-206ENST00000450643 RGPD3A6NKT7 1758 aaPredicted RBP22.34■■□□□ 1.17
RHBDF1-206ENST00000450643 RGPD4Q7Z3J3 1758 aa22.34■■□□□ 1.17
RHBDF1-206ENST00000450643 TRIM35Q9UPQ4 493 aa22.33■■□□□ 1.17
RHBDF1-206ENST00000450643 LY75O60449 1722 aa22.32■■□□□ 1.16
RHBDF1-206ENST00000450643 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
RHBDF1-206ENST00000450643 PALLDQ8WX93 1383 aa22.3■■□□□ 1.16
RHBDF1-206ENST00000450643 SMARCC1Q92922 1105 aaPredicted RBP22.3■■□□□ 1.16
RHBDF1-206ENST00000450643 ASAP1Q9ULH1 1129 aa22.3■■□□□ 1.16
RHBDF1-206ENST00000450643 BTBD11A6QL63 1104 aa22.29■■□□□ 1.16
RHBDF1-206ENST00000450643 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
RHBDF1-206ENST00000450643 LAS1LQ9Y4W2 734 aaKnown RBP22.29■■□□□ 1.16
RHBDF1-206ENST00000450643 UBR2Q8IWV8 1755 aa22.29■■□□□ 1.16
RHBDF1-206ENST00000450643 CALD1Q05682 793 aaKnown RBP22.28■■□□□ 1.16
RHBDF1-206ENST00000450643 EN1Q05925 392 aaPredicted RBP22.28■■□□□ 1.16
RHBDF1-206ENST00000450643 TAF7Q15545 349 aaPredicted RBP22.28■■□□□ 1.16
RHBDF1-206ENST00000450643 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
RHBDF1-206ENST00000450643 RREB1Q92766 1687 aa22.27■■□□□ 1.16
RHBDF1-206ENST00000450643 SLC39A6Q13433 755 aa22.27■■□□□ 1.16
RHBDF1-206ENST00000450643 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
RHBDF1-206ENST00000450643 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
RHBDF1-206ENST00000450643 ATG3Q9NT62 314 aa22.27■■□□□ 1.16
RHBDF1-206ENST00000450643 HNRNPUQ00839 825 aaKnown RBP eCLIP22.26■■□□□ 1.15
RHBDF1-206ENST00000450643 WWC1Q8IX03 1113 aa22.26■■□□□ 1.15
RHBDF1-206ENST00000450643 RBM42Q9BTD8 480 aaKnown RBP22.26■■□□□ 1.15
RHBDF1-206ENST00000450643 SOCS7O14512 581 aa22.25■■□□□ 1.15
RHBDF1-206ENST00000450643 PLSCR1O15162 318 aa22.25■■□□□ 1.15
RHBDF1-206ENST00000450643 MIS18AQ9NYP9 233 aa22.25■■□□□ 1.15
RHBDF1-206ENST00000450643 NUP188Q5SRE5 1749 aa22.24■■□□□ 1.15
RHBDF1-206ENST00000450643 PTCD1O75127 700 aaKnown RBP22.24■■□□□ 1.15
RHBDF1-206ENST00000450643 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
RHBDF1-206ENST00000450643 NCBP3Q53F19 620 aaKnown RBP22.24■■□□□ 1.15
RHBDF1-206ENST00000450643 TSPYL4Q9UJ04 414 aa22.24■■□□□ 1.15
RHBDF1-206ENST00000450643 C5P01031 1676 aa22.23■■□□□ 1.15
RHBDF1-206ENST00000450643 KCPQ6ZWJ8 1503 aa22.23■■□□□ 1.15
RHBDF1-206ENST00000450643 ZNF790Q6PG37 636 aa22.23■■□□□ 1.15
RHBDF1-206ENST00000450643 TAF1LQ8IZX4 1826 aa22.22■■□□□ 1.15
RHBDF1-206ENST00000450643 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
RHBDF1-206ENST00000450643 TJP1Q07157 1748 aa22.21■■□□□ 1.15
RHBDF1-206ENST00000450643 TXNRD1Q16881 649 aa22.21■■□□□ 1.15
RHBDF1-206ENST00000450643 CAMKK2Q96RR4 588 aa22.21■■□□□ 1.15
RHBDF1-206ENST00000450643 ZNF831Q5JPB2 1677 aa22.2■■□□□ 1.15
RHBDF1-206ENST00000450643 LOC102724428A0A0B4J2F2 783 aa22.2■■□□□ 1.14
RHBDF1-206ENST00000450643 KCNQ3O43525 872 aa22.2■■□□□ 1.14
RHBDF1-206ENST00000450643 KCNQ4P56696 695 aa22.2■■□□□ 1.14
RHBDF1-206ENST00000450643 SIK1P57059 783 aa22.2■■□□□ 1.14
RHBDF1-206ENST00000450643 GNAI1P63096 354 aa22.2■■□□□ 1.14
RHBDF1-206ENST00000450643 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
RHBDF1-206ENST00000450643 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
RHBDF1-206ENST00000450643 ATP6V1AP38606 617 aa22.18■■□□□ 1.14
RHBDF1-206ENST00000450643 SLC27A3Q5K4L6 730 aa22.18■■□□□ 1.14
RHBDF1-206ENST00000450643 WDR63Q8IWG1 891 aa22.18■■□□□ 1.14
RHBDF1-206ENST00000450643 ZNF496Q96IT1 587 aaPredicted RBP22.18■■□□□ 1.14
RHBDF1-206ENST00000450643 CFAP44Q96MT7 982 aa22.18■■□□□ 1.14
RHBDF1-206ENST00000450643 LAMB4A4D0S4 1761 aa22.17■■□□□ 1.14
RHBDF1-206ENST00000450643 COL5A3P25940 1745 aaPredicted RBP22.17■■□□□ 1.14
RHBDF1-206ENST00000450643 CICQ96RK0 1608 aaPredicted RBP22.17■■□□□ 1.14
RHBDF1-206ENST00000450643 IL16Q14005 1332 aa22.17■■□□□ 1.14
RHBDF1-206ENST00000450643 BABAM1Q9NWV8 329 aa22.17■■□□□ 1.14
RHBDF1-206ENST00000450643 CHL1O00533 1208 aa22.16■■□□□ 1.14
RHBDF1-206ENST00000450643 MBIPQ9NS73 344 aa22.16■■□□□ 1.14
RHBDF1-206ENST00000450643 HEG1Q9ULI3 1381 aa22.15■■□□□ 1.14
RHBDF1-206ENST00000450643 PROM2Q8N271 834 aa22.15■■□□□ 1.14
RHBDF1-206ENST00000450643 C4BP0C0L5 1744 aa22.14■■□□□ 1.14
RHBDF1-206ENST00000450643 ZNF521Q96K83 1311 aa22.14■■□□□ 1.14
RHBDF1-206ENST00000450643 ZNF853P0CG23 659 aa22.14■■□□□ 1.13
RHBDF1-206ENST00000450643 GOLGA2Q08379 1002 aa22.14■■□□□ 1.13
RHBDF1-206ENST00000450643 TSR2Q969E8 191 aaKnown RBP22.14■■□□□ 1.13
RHBDF1-206ENST00000450643 YTHDC1Q96MU7 727 aaKnown RBP22.14■■□□□ 1.13
RHBDF1-206ENST00000450643 LRRC4BQ9NT99 713 aa22.14■■□□□ 1.13
RHBDF1-206ENST00000450643 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
RHBDF1-206ENST00000450643 ITPK1Q13572 414 aa22.13■■□□□ 1.13
RHBDF1-206ENST00000450643 SLC4A9Q96Q91 983 aa22.13■■□□□ 1.13
RHBDF1-206ENST00000450643 DNAJC10Q8IXB1 793 aa22.12■■□□□ 1.13
RHBDF1-206ENST00000450643 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
RHBDF1-206ENST00000450643 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
RHBDF1-206ENST00000450643 FANCIQ9NVI1 1328 aa22.1■■□□□ 1.13
RHBDF1-206ENST00000450643 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
RHBDF1-206ENST00000450643 LINC00116Q8NCU8 138 aa22.1■■□□□ 1.13
RHBDF1-206ENST00000450643 TUBGCP6Q96RT7 1819 aa22.1■■□□□ 1.13
RHBDF1-206ENST00000450643 ZBED9Q6R2W3 1325 aa22.09■■□□□ 1.13
RHBDF1-206ENST00000450643 HMGB2P26583 209 aaKnown RBP22.09■■□□□ 1.13
RHBDF1-206ENST00000450643 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
RHBDF1-206ENST00000450643 E9PSI1 815 aa22.08■■□□□ 1.13
RHBDF1-206ENST00000450643 KRT24Q2M2I5 525 aa22.08■■□□□ 1.13
RHBDF1-206ENST00000450643 NBPF14Q5TI25 921 aa22.08■■□□□ 1.13
RHBDF1-206ENST00000450643 AK7Q96M32 723 aa22.08■■□□□ 1.13
RHBDF1-206ENST00000450643 TEX13AQ9BXU3 409 aaPredicted RBP22.08■■□□□ 1.13
RHBDF1-206ENST00000450643 STK32BQ9NY57 414 aa22.08■■□□□ 1.13
RHBDF1-206ENST00000450643 MYH14Q7Z406 1995 aaKnown RBP22.07■■□□□ 1.12
RHBDF1-206ENST00000450643 PRAMEF22A3QJZ6 481 aa22.07■■□□□ 1.12
RHBDF1-206ENST00000450643 STARD3NLO95772 234 aa22.07■■□□□ 1.12
RHBDF1-206ENST00000450643 CDCA7LQ96GN5 454 aa22.07■■□□□ 1.12
RHBDF1-206ENST00000450643 UBR3Q6ZT12 1888 aa22.07■■□□□ 1.12
RHBDF1-206ENST00000450643 GIGYF1O75420 1035 aaPredicted RBP22.06■■□□□ 1.12
RHBDF1-206ENST00000450643 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms