RNA–Protein interactions for RNA: ENST00000449641.6

RFC5-203, Transcript of replication factor C subunit 5, humanhuman

TSL 4

Gene RFC5, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-203ENST00000449641 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
RFC5-203ENST00000449641 APBA3O96018 575 aa8.71□□□□□ -1.02
RFC5-203ENST00000449641 EZH2Q15910 746 aaKnown RBP8.71□□□□□ -1.02
RFC5-203ENST00000449641 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.02
RFC5-203ENST00000449641 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
RFC5-203ENST00000449641 PIGBQ92521 554 aa8.71□□□□□ -1.02
RFC5-203ENST00000449641 MAP3K5Q99683 1374 aa8.71□□□□□ -1.02
RFC5-203ENST00000449641 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
RFC5-203ENST00000449641 RNMTO43148 476 aaKnown RBP8.7□□□□□ -1.02
RFC5-203ENST00000449641 SF3B2Q13435 895 aaKnown RBP8.7□□□□□ -1.02
RFC5-203ENST00000449641 IL17REQ8NFR9 667 aa8.7□□□□□ -1.02
RFC5-203ENST00000449641 LGR6Q9HBX8 967 aa8.7□□□□□ -1.02
RFC5-203ENST00000449641 ADAMTS8Q9UP79 889 aa8.7□□□□□ -1.02
RFC5-203ENST00000449641 COL5A3P25940 1745 aaPredicted RBP8.69□□□□□ -1.02
RFC5-203ENST00000449641 HTATSF1O43719 755 aaKnown RBP8.69□□□□□ -1.02
RFC5-203ENST00000449641 TXNRD1Q16881 649 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 C1orf141Q5JVX7 400 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 MPRIPQ6WCQ1 1025 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 KCPQ6ZWJ8 1503 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 C5P01031 1676 aa8.69□□□□□ -1.02
RFC5-203ENST00000449641 TJP1Q07157 1748 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 TUBGCP6Q96RT7 1819 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 GNAT3A8MTJ3 354 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 NFE2L2Q16236 605 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 SLC4A9Q96Q91 983 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 SLC52A2Q9HAB3 445 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 ATG3Q9NT62 314 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 PALLDQ8WX93 1383 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 KDM3BQ7LBC6 1761 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 CASZ1Q86V15 1759 aa8.68□□□□□ -1.02
RFC5-203ENST00000449641 WDR43Q15061 677 aaKnown RBP eCLIP8.67□□□□□ -1.02
RFC5-203ENST00000449641 NFATC2IPQ8NCF5 419 aa8.67□□□□□ -1.02
RFC5-203ENST00000449641 PNNQ9H307 717 aaKnown RBP8.67□□□□□ -1.02
RFC5-203ENST00000449641 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
RFC5-203ENST00000449641 TMOD3Q9NYL9 352 aa8.67□□□□□ -1.02
RFC5-203ENST00000449641 ASAP1Q9ULH1 1129 aa8.67□□□□□ -1.02
RFC5-203ENST00000449641 COL24A1Q17RW2 1714 aa8.66□□□□□ -1.02
RFC5-203ENST00000449641 TMPOP42166 694 aaKnown RBP8.66□□□□□ -1.02
RFC5-203ENST00000449641 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
RFC5-203ENST00000449641 SMARCC1Q92922 1105 aaPredicted RBP8.66□□□□□ -1.02
RFC5-203ENST00000449641 SYTL4Q96C24 671 aaPredicted RBP8.66□□□□□ -1.02
RFC5-203ENST00000449641 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
RFC5-203ENST00000449641 MYH14Q7Z406 1995 aaKnown RBP8.66□□□□□ -1.02
RFC5-203ENST00000449641 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
RFC5-203ENST00000449641 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
RFC5-203ENST00000449641 CABP4P57796 275 aa8.65□□□□□ -1.02
RFC5-203ENST00000449641 AKT1S1Q96B36 256 aa8.65□□□□□ -1.02
RFC5-203ENST00000449641 TRIM35Q9UPQ4 493 aa8.65□□□□□ -1.02
RFC5-203ENST00000449641 HEG1Q9ULI3 1381 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 FANCIQ9NVI1 1328 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 LOC102724428A0A0B4J2F2 783 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 SIK1P57059 783 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 ITPK1Q13572 414 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 DCTN1Q14203 1278 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 ZNF827Q17R98 1081 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 CCDC146Q8IYE0 955 aa8.64□□□□□ -1.03
RFC5-203ENST00000449641 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.64□□□□□ -1.03
RFC5-203ENST00000449641 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
RFC5-203ENST00000449641 RRP1P56182 461 aaKnown RBP8.63□□□□□ -1.03
RFC5-203ENST00000449641 KCNQ4P56696 695 aa8.63□□□□□ -1.03
RFC5-203ENST00000449641 SLC15A2Q16348 729 aa8.63□□□□□ -1.03
RFC5-203ENST00000449641 MCM10Q7L590 875 aa8.63□□□□□ -1.03
RFC5-203ENST00000449641 CCNL1Q9UK58 526 aaPredicted RBP8.63□□□□□ -1.03
RFC5-203ENST00000449641 RCAN3Q9UKA8 241 aa8.63□□□□□ -1.03
RFC5-203ENST00000449641 APAF1O14727 1248 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 RIPK4P57078 832 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 SLC39A6Q13433 755 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 LINC00116Q8NCU8 138 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 LRP5O75197 1615 aa8.62□□□□□ -1.03
RFC5-203ENST00000449641 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 LAMB4A4D0S4 1761 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 KCNQ3O43525 872 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 NEFMP07197 916 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 ZNF853P0CG23 659 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 TEFQ10587 303 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 AAMPQ13685 434 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 TAF7Q15545 349 aaPredicted RBP8.61□□□□□ -1.03
RFC5-203ENST00000449641 CCDC27Q2M243 656 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
RFC5-203ENST00000449641 AMIGO3Q86WK7 504 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 RTF1Q92541 710 aaKnown RBP8.61□□□□□ -1.03
RFC5-203ENST00000449641 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
RFC5-203ENST00000449641 THUMPD2Q9BTF0 503 aaKnown RBP8.61□□□□□ -1.03
RFC5-203ENST00000449641 BABAM1Q9NWV8 329 aa8.61□□□□□ -1.03
RFC5-203ENST00000449641 C4AP0C0L4 1744 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 PNPLA7Q6ZV29 1317 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 ZNF521Q96K83 1311 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 CNTNAP4Q9C0A0 1308 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 LMOD3Q0VAK6 560 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 R3HDM1Q15032 1099 aaKnown RBP8.6□□□□□ -1.03
RFC5-203ENST00000449641 NBPF14Q5TI25 921 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 CCDC136Q96JN2 1154 aa8.6□□□□□ -1.03
RFC5-203ENST00000449641 RRP7AQ9Y3A4 280 aaKnown RBP8.6□□□□□ -1.03
RFC5-203ENST00000449641 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
RFC5-203ENST00000449641 E9PSI1 815 aa8.59□□□□□ -1.03
RFC5-203ENST00000449641 CHL1O00533 1208 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms