RNA–Protein interactions for RNA: ENST00000449279.5

SEM1-206, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-206ENST00000449279 PRIM1P49642 420 aaKnown RBP13□□□□□ -0.33
SEM1-206ENST00000449279 DCAF5Q96JK2 942 aa13□□□□□ -0.33
SEM1-206ENST00000449279 ZNF831Q5JPB2 1677 aa12.99□□□□□ -0.33
SEM1-206ENST00000449279 HNRNPUQ00839 825 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEM1-206ENST00000449279 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
SEM1-206ENST00000449279 YTHDC1Q96MU7 727 aaKnown RBP12.99□□□□□ -0.33
SEM1-206ENST00000449279 ZNF521Q96K83 1311 aa12.98□□□□□ -0.33
SEM1-206ENST00000449279 TRIM37O94972 964 aa12.98□□□□□ -0.33
SEM1-206ENST00000449279 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
SEM1-206ENST00000449279 KCNQ3O43525 872 aa12.97□□□□□ -0.33
SEM1-206ENST00000449279 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
SEM1-206ENST00000449279 FAM196AQ6ZSG2 479 aa12.97□□□□□ -0.33
SEM1-206ENST00000449279 NFATC2IPQ8NCF5 419 aa12.97□□□□□ -0.33
SEM1-206ENST00000449279 PIGBQ92521 554 aa12.97□□□□□ -0.33
SEM1-206ENST00000449279 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
SEM1-206ENST00000449279 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
SEM1-206ENST00000449279 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
SEM1-206ENST00000449279 MIS18AQ9NYP9 233 aa12.97□□□□□ -0.33
SEM1-206ENST00000449279 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
SEM1-206ENST00000449279 CABP4P57796 275 aa12.96□□□□□ -0.33
SEM1-206ENST00000449279 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
SEM1-206ENST00000449279 UBR3Q6ZT12 1888 aa12.95□□□□□ -0.34
SEM1-206ENST00000449279 ERVV-2B6SEH9 535 aa12.95□□□□□ -0.34
SEM1-206ENST00000449279 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
SEM1-206ENST00000449279 TMOD3Q9NYL9 352 aa12.95□□□□□ -0.34
SEM1-206ENST00000449279 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
SEM1-206ENST00000449279 C4AP0C0L4 1744 aa12.94□□□□□ -0.34
SEM1-206ENST00000449279 C4BP0C0L5 1744 aa12.94□□□□□ -0.34
SEM1-206ENST00000449279 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
SEM1-206ENST00000449279 TEFQ10587 303 aa12.94□□□□□ -0.34
SEM1-206ENST00000449279 CDCA7LQ96GN5 454 aa12.94□□□□□ -0.34
SEM1-206ENST00000449279 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
SEM1-206ENST00000449279 ATG3Q9NT62 314 aa12.93□□□□□ -0.34
SEM1-206ENST00000449279 LAS1LQ9Y4W2 734 aaKnown RBP12.93□□□□□ -0.34
SEM1-206ENST00000449279 KCNQ4P56696 695 aa12.92□□□□□ -0.34
SEM1-206ENST00000449279 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
SEM1-206ENST00000449279 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
SEM1-206ENST00000449279 BCL11BQ9C0K0 894 aaPredicted RBP12.92□□□□□ -0.34
SEM1-206ENST00000449279 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
SEM1-206ENST00000449279 ZBED9Q6R2W3 1325 aa12.91□□□□□ -0.34
SEM1-206ENST00000449279 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
SEM1-206ENST00000449279 BTBD11A6QL63 1104 aa12.91□□□□□ -0.34
SEM1-206ENST00000449279 ZNF853P0CG23 659 aa12.91□□□□□ -0.34
SEM1-206ENST00000449279 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
SEM1-206ENST00000449279 SLC4A9Q96Q91 983 aa12.91□□□□□ -0.34
SEM1-206ENST00000449279 MBIPQ9NS73 344 aa12.91□□□□□ -0.34
SEM1-206ENST00000449279 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
SEM1-206ENST00000449279 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
SEM1-206ENST00000449279 DEFB132Q7Z7B7 95 aa12.9□□□□□ -0.34
SEM1-206ENST00000449279 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
SEM1-206ENST00000449279 CHL1O00533 1208 aa12.89□□□□□ -0.35
SEM1-206ENST00000449279 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
SEM1-206ENST00000449279 APBA3O96018 575 aa12.89□□□□□ -0.35
SEM1-206ENST00000449279 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
SEM1-206ENST00000449279 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
SEM1-206ENST00000449279 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
SEM1-206ENST00000449279 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
SEM1-206ENST00000449279 IL16Q14005 1332 aa12.88□□□□□ -0.35
SEM1-206ENST00000449279 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
SEM1-206ENST00000449279 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
SEM1-206ENST00000449279 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
SEM1-206ENST00000449279 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
SEM1-206ENST00000449279 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 GNAI1P63096 354 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
SEM1-206ENST00000449279 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 SLFN5Q08AF3 891 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 ITPK1Q13572 414 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 PROM2Q8N271 834 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
SEM1-206ENST00000449279 NUP98P52948 1817 aa12.87□□□□□ -0.35
SEM1-206ENST00000449279 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
SEM1-206ENST00000449279 EIF4A1P60842 406 aaKnown RBP12.86□□□□□ -0.35
SEM1-206ENST00000449279 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
SEM1-206ENST00000449279 LRRC4BQ9NT99 713 aa12.86□□□□□ -0.35
SEM1-206ENST00000449279 ANKRD36CQ5JPF3 1778 aa12.86□□□□□ -0.35
SEM1-206ENST00000449279 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
SEM1-206ENST00000449279 LOC102724428A0A0B4J2F2 783 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 SIK1P57059 783 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 CALD1Q05682 793 aaKnown RBP12.85□□□□□ -0.35
SEM1-206ENST00000449279 DNAJC10Q8IXB1 793 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 TRMT2AQ8IZ69 625 aaKnown RBP12.85□□□□□ -0.35
SEM1-206ENST00000449279 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 C8orf58Q8NAV2 365 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 CAMKK2Q96RR4 588 aa12.85□□□□□ -0.35
SEM1-206ENST00000449279 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
SEM1-206ENST00000449279 SCN7AQ01118 1682 aa12.84□□□□□ -0.35
SEM1-206ENST00000449279 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
SEM1-206ENST00000449279 EXOSC9Q06265 439 aaKnown RBP12.84□□□□□ -0.35
SEM1-206ENST00000449279 TXNRD1Q16881 649 aa12.84□□□□□ -0.35
SEM1-206ENST00000449279 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
SEM1-206ENST00000449279 LINC00116Q8NCU8 138 aa12.84□□□□□ -0.35
SEM1-206ENST00000449279 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
SEM1-206ENST00000449279 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
SEM1-206ENST00000449279 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
SEM1-206ENST00000449279 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
SEM1-206ENST00000449279 E9PSI1 815 aa12.82□□□□□ -0.36
SEM1-206ENST00000449279 PLSCR1O15162 318 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms