RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 DCAF8L1A6NGE4 600 aa23.63■■□□□ 1.37
CCDC188-201ENST00000439765 SYT17Q9BSW7 474 aa23.63■■□□□ 1.37
CCDC188-201ENST00000439765 ARXQ96QS3 562 aa23.62■■□□□ 1.37
CCDC188-201ENST00000439765 SMARCC1Q92922 1105 aaPredicted RBP23.62■■□□□ 1.37
CCDC188-201ENST00000439765 RSPH6AQ9H0K4 717 aa23.62■■□□□ 1.37
CCDC188-201ENST00000439765 PRKRIP1Q9H875 184 aaPredicted RBP23.62■■□□□ 1.37
CCDC188-201ENST00000439765 ADAMTS7Q9UKP4 1686 aa23.61■■□□□ 1.37
CCDC188-201ENST00000439765 HSP90AB1P08238 724 aaKnown RBP23.61■■□□□ 1.37
CCDC188-201ENST00000439765 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
CCDC188-201ENST00000439765 ZNF831Q5JPB2 1677 aa23.6■■□□□ 1.37
CCDC188-201ENST00000439765 MTHFSDQ2M296 383 aaKnown RBP23.6■■□□□ 1.37
CCDC188-201ENST00000439765 PIGBQ92521 554 aa23.6■■□□□ 1.37
CCDC188-201ENST00000439765 DCAF5Q96JK2 942 aa23.6■■□□□ 1.37
CCDC188-201ENST00000439765 TMOD3Q9NYL9 352 aa23.59■■□□□ 1.37
CCDC188-201ENST00000439765 DLG5Q8TDM6 1919 aa23.58■■□□□ 1.37
CCDC188-201ENST00000439765 AKAP4Q5JQC9 854 aa23.57■■□□□ 1.36
CCDC188-201ENST00000439765 POLD1P28340 1107 aa23.56■■□□□ 1.36
CCDC188-201ENST00000439765 MRC1P22897 1456 aa23.56■■□□□ 1.36
CCDC188-201ENST00000439765 COL23A1Q86Y22 540 aaPredicted RBP23.56■■□□□ 1.36
CCDC188-201ENST00000439765 PHACTR3Q96KR7 559 aa23.56■■□□□ 1.36
CCDC188-201ENST00000439765 ANP32CO43423 234 aa23.55■■□□□ 1.36
CCDC188-201ENST00000439765 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
CCDC188-201ENST00000439765 COL5A3P25940 1745 aaPredicted RBP23.54■■□□□ 1.36
CCDC188-201ENST00000439765 ERVV-2B6SEH9 535 aa23.53■■□□□ 1.36
CCDC188-201ENST00000439765 YY1P25490 414 aa23.53■■□□□ 1.36
CCDC188-201ENST00000439765 FLAD1Q8NFF5 587 aa23.53■■□□□ 1.36
CCDC188-201ENST00000439765 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
CCDC188-201ENST00000439765 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
CCDC188-201ENST00000439765 FCHSD2O94868 740 aa23.52■■□□□ 1.36
CCDC188-201ENST00000439765 SIK1P57059 783 aa23.52■■□□□ 1.36
CCDC188-201ENST00000439765 CABP4P57796 275 aa23.52■■□□□ 1.36
CCDC188-201ENST00000439765 UTRNP46939 3433 aa23.52■■□□□ 1.36
CCDC188-201ENST00000439765 ASAP1Q9ULH1 1129 aa23.51■■□□□ 1.35
CCDC188-201ENST00000439765 LGR6Q9HBX8 967 aa23.5■■□□□ 1.35
CCDC188-201ENST00000439765 RNMTO43148 476 aaKnown RBP23.49■■□□□ 1.35
CCDC188-201ENST00000439765 MSH5O43196 834 aa23.49■■□□□ 1.35
CCDC188-201ENST00000439765 NFATC2IPQ8NCF5 419 aa23.49■■□□□ 1.35
CCDC188-201ENST00000439765 AK7Q96M32 723 aa23.49■■□□□ 1.35
CCDC188-201ENST00000439765 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
CCDC188-201ENST00000439765 GNAT3A8MTJ3 354 aa23.48■■□□□ 1.35
CCDC188-201ENST00000439765 MYH14Q7Z406 1995 aaKnown RBP23.48■■□□□ 1.35
CCDC188-201ENST00000439765 CICQ96RK0 1608 aaPredicted RBP23.47■■□□□ 1.35
CCDC188-201ENST00000439765 UBR2Q8IWV8 1755 aa23.47■■□□□ 1.35
CCDC188-201ENST00000439765 LINC00116Q8NCU8 138 aa23.46■■□□□ 1.35
CCDC188-201ENST00000439765 SLC52A2Q9HAB3 445 aa23.46■■□□□ 1.35
CCDC188-201ENST00000439765 TJP1Q07157 1748 aa23.45■■□□□ 1.35
CCDC188-201ENST00000439765 NEFMP07197 916 aa23.45■■□□□ 1.34
CCDC188-201ENST00000439765 ITPK1Q13572 414 aa23.45■■□□□ 1.34
CCDC188-201ENST00000439765 AMIGO3Q86WK7 504 aa23.45■■□□□ 1.34
CCDC188-201ENST00000439765 MIER1Q8N108 512 aa23.45■■□□□ 1.34
CCDC188-201ENST00000439765 SSFA2P28290 1259 aa23.44■■□□□ 1.34
CCDC188-201ENST00000439765 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
CCDC188-201ENST00000439765 PLEKHF1Q96S99 279 aa23.44■■□□□ 1.34
CCDC188-201ENST00000439765 MAPK8IP3Q9UPT6 1336 aa23.44■■□□□ 1.34
CCDC188-201ENST00000439765 ATP6V1AP38606 617 aa23.43■■□□□ 1.34
CCDC188-201ENST00000439765 KLHL34Q8N239 644 aa23.43■■□□□ 1.34
CCDC188-201ENST00000439765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.43■■□□□ 1.34
CCDC188-201ENST00000439765 MSL1Q68DK7 614 aa23.43■■□□□ 1.34
CCDC188-201ENST00000439765 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
CCDC188-201ENST00000439765 C4AP0C0L4 1744 aa23.42■■□□□ 1.34
CCDC188-201ENST00000439765 CEMIPQ8WUJ3 1361 aa23.41■■□□□ 1.34
CCDC188-201ENST00000439765 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
CCDC188-201ENST00000439765 RBM42Q9BTD8 480 aaKnown RBP23.41■■□□□ 1.34
CCDC188-201ENST00000439765 GOLGB1Q14789 3259 aaKnown RBP23.41■■□□□ 1.34
CCDC188-201ENST00000439765 TEFQ10587 303 aa23.4■■□□□ 1.34
CCDC188-201ENST00000439765 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
CCDC188-201ENST00000439765 SLC4A9Q96Q91 983 aa23.4■■□□□ 1.34
CCDC188-201ENST00000439765 PNNQ9H307 717 aaKnown RBP23.4■■□□□ 1.34
CCDC188-201ENST00000439765 GNPATO15228 680 aa23.39■■□□□ 1.34
CCDC188-201ENST00000439765 PTCD1O75127 700 aaKnown RBP23.39■■□□□ 1.34
CCDC188-201ENST00000439765 PHF14O94880 888 aa23.39■■□□□ 1.34
CCDC188-201ENST00000439765 CCDC184Q52MB2 194 aa23.39■■□□□ 1.34
CCDC188-201ENST00000439765 MCM10Q7L590 875 aa23.39■■□□□ 1.34
CCDC188-201ENST00000439765 CCDC146Q8IYE0 955 aa23.39■■□□□ 1.34
CCDC188-201ENST00000439765 KIF13BQ9NQT8 1826 aa23.39■■□□□ 1.33
CCDC188-201ENST00000439765 SLC39A6Q13433 755 aa23.38■■□□□ 1.33
CCDC188-201ENST00000439765 RTF1Q92541 710 aaKnown RBP23.38■■□□□ 1.33
CCDC188-201ENST00000439765 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
CCDC188-201ENST00000439765 GPR162Q16538 588 aa23.37■■□□□ 1.33
CCDC188-201ENST00000439765 NFE2L2Q16236 605 aa23.36■■□□□ 1.33
CCDC188-201ENST00000439765 SMIM5Q71RC9 77 aa23.36■■□□□ 1.33
CCDC188-201ENST00000439765 ADAMTS8Q9UP79 889 aa23.36■■□□□ 1.33
CCDC188-201ENST00000439765 CD2APQ9Y5K6 639 aa23.36■■□□□ 1.33
CCDC188-201ENST00000439765 CNTNAP4Q9C0A0 1308 aa23.36■■□□□ 1.33
CCDC188-201ENST00000439765 RC3H1Q5TC82 1133 aaKnown RBP23.35■■□□□ 1.33
CCDC188-201ENST00000439765 KDM3BQ7LBC6 1761 aa23.34■■□□□ 1.33
CCDC188-201ENST00000439765 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
CCDC188-201ENST00000439765 RTCBQ9Y3I0 505 aaKnown RBP23.33■■□□□ 1.33
CCDC188-201ENST00000439765 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
CCDC188-201ENST00000439765 ADRA2BP18089 450 aa23.32■■□□□ 1.32
CCDC188-201ENST00000439765 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
CCDC188-201ENST00000439765 TTC5Q8N0Z6 440 aa23.31■■□□□ 1.32
CCDC188-201ENST00000439765 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
CCDC188-201ENST00000439765 KIAA1551Q9HCM1 1747 aa23.31■■□□□ 1.32
CCDC188-201ENST00000439765 RUNDC1Q96C34 613 aa23.3■■□□□ 1.32
CCDC188-201ENST00000439765 THUMPD2Q9BTF0 503 aaKnown RBP23.3■■□□□ 1.32
CCDC188-201ENST00000439765 ZNF784Q8NCA9 323 aaPredicted RBP23.3■■□□□ 1.32
CCDC188-201ENST00000439765 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
CCDC188-201ENST00000439765 RPS6KA4O75676 772 aa23.29■■□□□ 1.32
CCDC188-201ENST00000439765 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms