RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 SLC27A3Q5K4L6 730 aa25.81■■□□□ 1.72
SEMA3B-206ENST00000439487 CCDC146Q8IYE0 955 aa25.81■■□□□ 1.72
SEMA3B-206ENST00000439487 SIPA1L3O60292 1781 aaPredicted RBP25.81■■□□□ 1.72
SEMA3B-206ENST00000439487 MRC1P22897 1456 aa25.8■■□□□ 1.72
SEMA3B-206ENST00000439487 PSDA5PKW4 1024 aaPredicted RBP25.8■■□□□ 1.72
SEMA3B-206ENST00000439487 CCNL1Q9UK58 526 aaPredicted RBP25.8■■□□□ 1.72
SEMA3B-206ENST00000439487 PAPPAQ13219 1627 aa25.79■■□□□ 1.72
SEMA3B-206ENST00000439487 ANO8Q9HCE9 1232 aaPredicted RBP25.79■■□□□ 1.72
SEMA3B-206ENST00000439487 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
SEMA3B-206ENST00000439487 R3HDM1Q15032 1099 aaKnown RBP25.78■■□□□ 1.72
SEMA3B-206ENST00000439487 NFE2L2Q16236 605 aa25.78■■□□□ 1.72
SEMA3B-206ENST00000439487 RTF1Q92541 710 aaKnown RBP25.77■■□□□ 1.72
SEMA3B-206ENST00000439487 C5P01031 1676 aa25.77■■□□□ 1.72
SEMA3B-206ENST00000439487 DCTN1Q14203 1278 aa25.76■■□□□ 1.71
SEMA3B-206ENST00000439487 MCM10Q7L590 875 aa25.76■■□□□ 1.71
SEMA3B-206ENST00000439487 RUNDC1Q96C34 613 aa25.76■■□□□ 1.71
SEMA3B-206ENST00000439487 CEMIPQ8WUJ3 1361 aa25.75■■□□□ 1.71
SEMA3B-206ENST00000439487 TEFQ10587 303 aa25.75■■□□□ 1.71
SEMA3B-206ENST00000439487 LOC102724428A0A0B4J2F2 783 aa25.74■■□□□ 1.71
SEMA3B-206ENST00000439487 HTATSF1O43719 755 aaKnown RBP25.74■■□□□ 1.71
SEMA3B-206ENST00000439487 SIK1P57059 783 aa25.74■■□□□ 1.71
SEMA3B-206ENST00000439487 RBM42Q9BTD8 480 aaKnown RBP25.74■■□□□ 1.71
SEMA3B-206ENST00000439487 STK32BQ9NY57 414 aa25.74■■□□□ 1.71
SEMA3B-206ENST00000439487 TUBGCP6Q96RT7 1819 aa25.73■■□□□ 1.71
SEMA3B-206ENST00000439487 SLC39A6Q13433 755 aa25.73■■□□□ 1.71
SEMA3B-206ENST00000439487 PNISRQ8TF01 805 aaKnown RBP25.73■■□□□ 1.71
SEMA3B-206ENST00000439487 TMPOP42166 694 aaKnown RBP25.72■■□□□ 1.71
SEMA3B-206ENST00000439487 SLC15A2Q16348 729 aa25.72■■□□□ 1.71
SEMA3B-206ENST00000439487 RIPK4P57078 832 aa25.71■■□□□ 1.71
SEMA3B-206ENST00000439487 ZNF827Q17R98 1081 aa25.71■■□□□ 1.71
SEMA3B-206ENST00000439487 RRP7AQ9Y3A4 280 aaKnown RBP25.71■■□□□ 1.71
SEMA3B-206ENST00000439487 ZNF831Q5JPB2 1677 aa25.71■■□□□ 1.71
SEMA3B-206ENST00000439487 PTCD1O75127 700 aaKnown RBP25.7■■□□□ 1.7
SEMA3B-206ENST00000439487 ATP6V1AP38606 617 aa25.7■■□□□ 1.7
SEMA3B-206ENST00000439487 SLC4A9Q96Q91 983 aa25.7■■□□□ 1.7
SEMA3B-206ENST00000439487 UBR2Q8IWV8 1755 aa25.69■■□□□ 1.7
SEMA3B-206ENST00000439487 ITPK1Q13572 414 aa25.69■■□□□ 1.7
SEMA3B-206ENST00000439487 NEUROD2Q15784 382 aa25.69■■□□□ 1.7
SEMA3B-206ENST00000439487 AKT1S1Q96B36 256 aa25.69■■□□□ 1.7
SEMA3B-206ENST00000439487 C4BP0C0L5 1744 aa25.68■■□□□ 1.7
SEMA3B-206ENST00000439487 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
SEMA3B-206ENST00000439487 COL5A3P25940 1745 aaPredicted RBP25.67■■□□□ 1.7
SEMA3B-206ENST00000439487 QSER1Q2KHR3 1735 aa25.67■■□□□ 1.7
SEMA3B-206ENST00000439487 THUMPD2Q9BTF0 503 aaKnown RBP25.67■■□□□ 1.7
SEMA3B-206ENST00000439487 TJP1Q07157 1748 aa25.66■■□□□ 1.7
SEMA3B-206ENST00000439487 LINC00116Q8NCU8 138 aa25.66■■□□□ 1.7
SEMA3B-206ENST00000439487 KCPQ6ZWJ8 1503 aa25.66■■□□□ 1.7
SEMA3B-206ENST00000439487 MYH14Q7Z406 1995 aaKnown RBP25.65■■□□□ 1.7
SEMA3B-206ENST00000439487 BTBD11A6QL63 1104 aa25.65■■□□□ 1.7
SEMA3B-206ENST00000439487 CASZ1Q86V15 1759 aa25.64■■□□□ 1.7
SEMA3B-206ENST00000439487 APAF1O14727 1248 aa25.64■■□□□ 1.7
SEMA3B-206ENST00000439487 TTC5Q8N0Z6 440 aa25.64■■□□□ 1.7
SEMA3B-206ENST00000439487 UBR3Q6ZT12 1888 aa25.64■■□□□ 1.69
SEMA3B-206ENST00000439487 KCNQ3O43525 872 aa25.63■■□□□ 1.69
SEMA3B-206ENST00000439487 ZNF790Q6PG37 636 aa25.63■■□□□ 1.69
SEMA3B-206ENST00000439487 PDGFDQ9GZP0 370 aaPredicted RBP25.63■■□□□ 1.69
SEMA3B-206ENST00000439487 TFCP2L1Q9NZI6 479 aa25.63■■□□□ 1.69
SEMA3B-206ENST00000439487 HMGB2P26583 209 aaKnown RBP25.62■■□□□ 1.69
SEMA3B-206ENST00000439487 LMOD3Q0VAK6 560 aa25.62■■□□□ 1.69
SEMA3B-206ENST00000439487 TAF7Q15545 349 aaPredicted RBP25.62■■□□□ 1.69
SEMA3B-206ENST00000439487 FAM9BQ8IZU0 186 aa25.61■■□□□ 1.69
SEMA3B-206ENST00000439487 MIS18AQ9NYP9 233 aa25.61■■□□□ 1.69
SEMA3B-206ENST00000439487 TRIM35Q9UPQ4 493 aa25.61■■□□□ 1.69
SEMA3B-206ENST00000439487 CICQ96RK0 1608 aaPredicted RBP25.61■■□□□ 1.69
SEMA3B-206ENST00000439487 KDM3BQ7LBC6 1761 aa25.61■■□□□ 1.69
SEMA3B-206ENST00000439487 AK7Q96M32 723 aa25.6■■□□□ 1.69
SEMA3B-206ENST00000439487 SENP3-EIF4A1A0A087X0R7 540 aa25.59■■□□□ 1.69
SEMA3B-206ENST00000439487 DNAJC10Q8IXB1 793 aa25.59■■□□□ 1.69
SEMA3B-206ENST00000439487 ZNF496Q96IT1 587 aaPredicted RBP25.59■■□□□ 1.69
SEMA3B-206ENST00000439487 PNPLA7Q6ZV29 1317 aa25.59■■□□□ 1.69
SEMA3B-206ENST00000439487 SMIM5Q71RC9 77 aa25.57■■□□□ 1.68
SEMA3B-206ENST00000439487 AMIGO3Q86WK7 504 aa25.56■■□□□ 1.68
SEMA3B-206ENST00000439487 FMNL2Q96PY5 1086 aa25.56■■□□□ 1.68
SEMA3B-206ENST00000439487 CCER2I3L3R5 266 aa25.55■■□□□ 1.68
SEMA3B-206ENST00000439487 VSIG10Q8N0Z9 540 aa25.55■■□□□ 1.68
SEMA3B-206ENST00000439487 HEG1Q9ULI3 1381 aa25.55■■□□□ 1.68
SEMA3B-206ENST00000439487 GNPATO15228 680 aa25.54■■□□□ 1.68
SEMA3B-206ENST00000439487 RC3H1Q5TC82 1133 aaKnown RBP25.54■■□□□ 1.68
SEMA3B-206ENST00000439487 COL23A1Q86Y22 540 aaPredicted RBP25.54■■□□□ 1.68
SEMA3B-206ENST00000439487 MIER1Q8N108 512 aa25.54■■□□□ 1.68
SEMA3B-206ENST00000439487 CNTNAP4Q9C0A0 1308 aa25.54■■□□□ 1.68
SEMA3B-206ENST00000439487 PHF14O94880 888 aa25.53■■□□□ 1.68
SEMA3B-206ENST00000439487 CRKLP46109 303 aaKnown RBP25.53■■□□□ 1.68
SEMA3B-206ENST00000439487 MSH5O43196 834 aa25.52■■□□□ 1.68
SEMA3B-206ENST00000439487 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
SEMA3B-206ENST00000439487 CYP19A1P11511 503 aaPredicted RBP25.52■■□□□ 1.68
SEMA3B-206ENST00000439487 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.5■■□□□ 1.67
SEMA3B-206ENST00000439487 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
SEMA3B-206ENST00000439487 TSPYL4Q9UJ04 414 aa25.5■■□□□ 1.67
SEMA3B-206ENST00000439487 LAS1LQ9Y4W2 734 aaKnown RBP25.5■■□□□ 1.67
SEMA3B-206ENST00000439487 INTS5Q6P9B9 1019 aaKnown RBP25.49■■□□□ 1.67
SEMA3B-206ENST00000439487 ATF5Q9Y2D1 282 aaPredicted RBP25.49■■□□□ 1.67
SEMA3B-206ENST00000439487 RTCBQ9Y3I0 505 aaKnown RBP25.49■■□□□ 1.67
SEMA3B-206ENST00000439487 LRP5O75197 1615 aa25.48■■□□□ 1.67
SEMA3B-206ENST00000439487 PRAMEF22A3QJZ6 481 aa25.48■■□□□ 1.67
SEMA3B-206ENST00000439487 RPS6KA4O75676 772 aa25.48■■□□□ 1.67
SEMA3B-206ENST00000439487 SSFA2P28290 1259 aa25.48■■□□□ 1.67
SEMA3B-206ENST00000439487 TEX13AQ9BXU3 409 aaPredicted RBP25.48■■□□□ 1.67
SEMA3B-206ENST00000439487 CCDC87Q9NVE4 849 aa25.48■■□□□ 1.67
SEMA3B-206ENST00000439487 EIF4A1P60842 406 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms