RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
LRCH3-206ENST00000438796 SPTY2D1Q68D10 685 aaPredicted RBP16.1■□□□□ 0.17
LRCH3-206ENST00000438796 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.1■□□□□ 0.17
LRCH3-206ENST00000438796 LARP6Q9BRS8 491 aaKnown RBP16.1■□□□□ 0.17
LRCH3-206ENST00000438796 THUMPD2Q9BTF0 503 aaKnown RBP16.1■□□□□ 0.17
LRCH3-206ENST00000438796 BCCIPQ9P287 314 aaKnown RBP eCLIP16.1■□□□□ 0.17
LRCH3-206ENST00000438796 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
LRCH3-206ENST00000438796 CFAP100Q494V2 611 aa16.1■□□□□ 0.17
LRCH3-206ENST00000438796 CUL5Q93034 780 aa16.1■□□□□ 0.17
LRCH3-206ENST00000438796 PPP1R12BO60237 982 aaPredicted RBP16.1■□□□□ 0.17
LRCH3-206ENST00000438796 ZNF622Q969S3 477 aaKnown RBP eCLIP16.1■□□□□ 0.174e-11■□□□□ 10.3
LRCH3-206ENST00000438796 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
LRCH3-206ENST00000438796 CCDC83Q8IWF9 413 aa16.1■□□□□ 0.17
LRCH3-206ENST00000438796 DYDC1Q8WWB3 177 aa16.09■□□□□ 0.17
LRCH3-206ENST00000438796 NUP62CLQ9H1M0 184 aa16.09■□□□□ 0.17
LRCH3-206ENST00000438796 NAPBQ9H115 298 aa16.09■□□□□ 0.17
LRCH3-206ENST00000438796 CFAP45Q9UL16 551 aa16.09■□□□□ 0.17
LRCH3-206ENST00000438796 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
LRCH3-206ENST00000438796 FERMT3Q86UX7 667 aa16.08■□□□□ 0.17
LRCH3-206ENST00000438796 WASF1Q92558 559 aa16.08■□□□□ 0.17
LRCH3-206ENST00000438796 CCDC150Q8NCX0 1101 aa16.08■□□□□ 0.17
LRCH3-206ENST00000438796 FEZ1Q99689 392 aa16.08■□□□□ 0.17
LRCH3-206ENST00000438796 FERMT2Q96AC1 680 aa16.08■□□□□ 0.16
LRCH3-206ENST00000438796 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.16
LRCH3-206ENST00000438796 GOLGA6L7A0A1B0GV03 622 aa16.08■□□□□ 0.16
LRCH3-206ENST00000438796 ERICH4A6NGS2 130 aa16.08■□□□□ 0.16
LRCH3-206ENST00000438796 CACNA2D4Q7Z3S7 1137 aa16.08■□□□□ 0.16
LRCH3-206ENST00000438796 VTI1AQ96AJ9 217 aa16.08■□□□□ 0.16
LRCH3-206ENST00000438796 FGD6Q6ZV73 1430 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 IFIT1P09914 478 aaKnown RBP16.07■□□□□ 0.16
LRCH3-206ENST00000438796 TSG101Q99816 390 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 ZNF287Q9HBT7 754 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
LRCH3-206ENST00000438796 BRD4O60885 1362 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-206ENST00000438796 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 TRMT112Q9UI30 125 aaKnown RBP16.07■□□□□ 0.16
LRCH3-206ENST00000438796 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 SAMM50Q9Y512 469 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 SCAPERQ9BY12 1400 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 ATF7IPQ6VMQ6 1270 aa16.07■□□□□ 0.16
LRCH3-206ENST00000438796 CCDC8Q9H0W5 538 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-206ENST00000438796 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
LRCH3-206ENST00000438796 AKNAQ7Z591 1439 aa16.06■□□□□ 0.16
LRCH3-206ENST00000438796 ERBINQ96RT1 1412 aa16.06■□□□□ 0.16
LRCH3-206ENST00000438796 USP8P40818 1118 aa16.06■□□□□ 0.16
LRCH3-206ENST00000438796 MAP2K1Q02750 393 aaPredicted RBP16.06■□□□□ 0.16
LRCH3-206ENST00000438796 CCDC91Q7Z6B0 441 aa16.06■□□□□ 0.16
LRCH3-206ENST00000438796 GSTTP1A0A1W2PQM5 241 aa16.06■□□□□ 0.16
LRCH3-206ENST00000438796 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
LRCH3-206ENST00000438796 IQCEQ6IPM2 695 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 PPFIA3O75145 1194 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-206ENST00000438796 AAMPQ13685 434 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 CCDC148Q8NFR7 591 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 SPA17Q15506 151 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 ARHGAP29Q52LW3 1261 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
LRCH3-206ENST00000438796 AKAP2Q9Y2D5 859 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 NLRP5P59047 1200 aa16.05■□□□□ 0.16
LRCH3-206ENST00000438796 ERLIN1O75477 346 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 MVPQ14764 893 aaKnown RBP16.04■□□□□ 0.16
LRCH3-206ENST00000438796 DUSP27Q5VZP5 1158 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 CTNNA2P26232 953 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 CETN2P41208 172 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
LRCH3-206ENST00000438796 RAB11FIP4Q86YS3 637 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 SMTNL1A8MU46 457 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 IFIT5Q13325 482 aaKnown RBP16.04■□□□□ 0.16
LRCH3-206ENST00000438796 CPLX3Q8WVH0 158 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 EIF3JO75822 258 aaKnown RBP16.04■□□□□ 0.16
LRCH3-206ENST00000438796 JARID2Q92833 1246 aaPredicted RBP16.04■□□□□ 0.16
LRCH3-206ENST00000438796 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 LARP1Q6PKG0 1096 aaKnown RBP16.04■□□□□ 0.16
LRCH3-206ENST00000438796 ZNF354CQ86Y25 554 aa16.04■□□□□ 0.16
LRCH3-206ENST00000438796 SLC5A1P13866 664 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 CCDC66A2RUB6 948 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 NUDT16Q96DE0 195 aaKnown RBP16.03■□□□□ 0.16
LRCH3-206ENST00000438796 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 SLC12A7Q9Y666 1083 aa16.03■□□□□ 0.16
LRCH3-206ENST00000438796 UQCRHLA0A096LP55 91 aa16.02■□□□□ 0.16
LRCH3-206ENST00000438796 UQCRHP07919 91 aa16.02■□□□□ 0.16
LRCH3-206ENST00000438796 ISM2Q6H9L7 571 aa16.02■□□□□ 0.16
LRCH3-206ENST00000438796 NF2P35240 595 aa16.02■□□□□ 0.16
LRCH3-206ENST00000438796 U3KPZ7 1027 aaPredicted RBP16.02■□□□□ 0.16
LRCH3-206ENST00000438796 KRT32Q14532 448 aa16.02■□□□□ 0.15
LRCH3-206ENST00000438796 SERPINA10Q9UK55 444 aa16.02■□□□□ 0.15
LRCH3-206ENST00000438796 CASQ1P31415 396 aa16.02■□□□□ 0.15
LRCH3-206ENST00000438796 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.15
LRCH3-206ENST00000438796 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
LRCH3-206ENST00000438796 ATAD2BQ9ULI0 1458 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 F8W031 263 aaPredicted RBP16.01■□□□□ 0.15
LRCH3-206ENST00000438796 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 SYCE3A1L190 88 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 F6X3S4 739 aa16.01■□□□□ 0.15
LRCH3-206ENST00000438796 TDRD12Q587J7 1177 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms