RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 CUL4AQ13619 759 aa18.19■□□□□ 0.5
TMCO3-202ENST00000434316 TSPYL4Q9UJ04 414 aa18.19■□□□□ 0.5
TMCO3-202ENST00000434316 MBD3O95983 291 aa18.19■□□□□ 0.5
TMCO3-202ENST00000434316 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
TMCO3-202ENST00000434316 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
TMCO3-202ENST00000434316 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
TMCO3-202ENST00000434316 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
TMCO3-202ENST00000434316 GNAI2P04899 355 aa18.18■□□□□ 0.5
TMCO3-202ENST00000434316 CCT4P50991 539 aaKnown RBP18.18■□□□□ 0.5
TMCO3-202ENST00000434316 MLECQ14165 292 aa18.18■□□□□ 0.5
TMCO3-202ENST00000434316 AKAP12Q02952 1782 aa18.18■□□□□ 0.5
TMCO3-202ENST00000434316 TTC21BQ7Z4L5 1316 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 MX1P20591 662 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 CHMLP26374 656 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 TERF1P54274 439 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 FAM13BQ9NYF5 915 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 LRRCC1Q9C099 1032 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 UQCRHLA0A096LP55 91 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 GADD45BO75293 160 aaPredicted RBP18.17■□□□□ 0.5
TMCO3-202ENST00000434316 UQCRHP07919 91 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
TMCO3-202ENST00000434316 ITSN1Q15811 1721 aa18.16■□□□□ 0.5
TMCO3-202ENST00000434316 MCM2P49736 904 aa18.16■□□□□ 0.5
TMCO3-202ENST00000434316 MTHFSDQ2M296 383 aaKnown RBP18.16■□□□□ 0.5
TMCO3-202ENST00000434316 CCDC39Q9UFE4 941 aa18.16■□□□□ 0.5
TMCO3-202ENST00000434316 MCCP23508 829 aa18.16■□□□□ 0.5
TMCO3-202ENST00000434316 IL25Q9H293 177 aa18.16■□□□□ 0.5
TMCO3-202ENST00000434316 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
TMCO3-202ENST00000434316 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
TMCO3-202ENST00000434316 TSPY26PQ9H489 355 aa18.15■□□□□ 0.5
TMCO3-202ENST00000434316 RIMS1Q86UR5 1692 aaKnown RBP18.14■□□□□ 0.49
TMCO3-202ENST00000434316 MPNDQ8N594 471 aa18.14■□□□□ 0.49
TMCO3-202ENST00000434316 TUBGCP6Q96RT7 1819 aa18.14■□□□□ 0.49
TMCO3-202ENST00000434316 ACEP12821 1306 aa18.13■□□□□ 0.49
TMCO3-202ENST00000434316 ZBTB7CA1YPR0 619 aa18.13■□□□□ 0.49
TMCO3-202ENST00000434316 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
TMCO3-202ENST00000434316 RTF1Q92541 710 aaKnown RBP18.13■□□□□ 0.49
TMCO3-202ENST00000434316 INTS4Q96HW7 963 aaKnown RBP18.13■□□□□ 0.49
TMCO3-202ENST00000434316 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
TMCO3-202ENST00000434316 OVOS2A0A0J9YW53 1432 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 OVOS2Q6IE36 1432 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 PTMAP06454 111 aaKnown RBP18.12■□□□□ 0.49
TMCO3-202ENST00000434316 MCM5P33992 734 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 ANAPC15P60006 121 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 FLIIQ13045 1269 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 SPATA31D1Q6ZQQ2 1576 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 IL1RAPL2Q9NP60 686 aa18.12■□□□□ 0.49
TMCO3-202ENST00000434316 LRRFIP2Q9Y608 721 aaKnown RBP18.12■□□□□ 0.49
TMCO3-202ENST00000434316 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
TMCO3-202ENST00000434316 RGPD1P0DJD0 1748 aa18.11■□□□□ 0.49
TMCO3-202ENST00000434316 MAP4K4O95819 1239 aaPredicted RBP18.1■□□□□ 0.49
TMCO3-202ENST00000434316 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
TMCO3-202ENST00000434316 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMCO3-202ENST00000434316 TCHHQ07283 1943 aa18.1■□□□□ 0.49
TMCO3-202ENST00000434316 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
TMCO3-202ENST00000434316 GNAI3P08754 354 aa18.09■□□□□ 0.49
TMCO3-202ENST00000434316 NUTM1Q86Y26 1132 aa18.09■□□□□ 0.49
TMCO3-202ENST00000434316 ARID3AQ99856 593 aa18.09■□□□□ 0.49
TMCO3-202ENST00000434316 STAP2Q9UGK3 403 aa18.09■□□□□ 0.49
TMCO3-202ENST00000434316 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
TMCO3-202ENST00000434316 LARP6Q9BRS8 491 aaKnown RBP18.09■□□□□ 0.49
TMCO3-202ENST00000434316 ZNF830Q96NB3 372 aaPredicted RBP18.08■□□□□ 0.48
TMCO3-202ENST00000434316 SRCIN1Q9C0H9 1055 aa18.08■□□□□ 0.48
TMCO3-202ENST00000434316 TECPR2O15040 1411 aa18.07■□□□□ 0.48
TMCO3-202ENST00000434316 SSH2Q76I76 1423 aa18.07■□□□□ 0.48
TMCO3-202ENST00000434316 ARHGEF10O15013 1369 aa18.07■□□□□ 0.48
TMCO3-202ENST00000434316 RPAP1Q9BWH6 1393 aaPredicted RBP18.07■□□□□ 0.48
TMCO3-202ENST00000434316 WDR33Q9C0J8 1336 aaKnown RBP18.07■□□□□ 0.48
TMCO3-202ENST00000434316 SASS6Q6UVJ0 657 aa18.07■□□□□ 0.48
TMCO3-202ENST00000434316 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
TMCO3-202ENST00000434316 DTNBO60941 627 aa18.06■□□□□ 0.48
TMCO3-202ENST00000434316 HSPA4P34932 840 aa18.06■□□□□ 0.48
TMCO3-202ENST00000434316 CNPY2Q9Y2B0 182 aa18.06■□□□□ 0.48
TMCO3-202ENST00000434316 USP6P35125 1406 aa18.06■□□□□ 0.48
TMCO3-202ENST00000434316 EYA1Q99502 592 aa18.06■□□□□ 0.48
TMCO3-202ENST00000434316 USP25Q9UHP3 1055 aa18.06■□□□□ 0.48
TMCO3-202ENST00000434316 IL17RAQ96F46 866 aa18.05■□□□□ 0.48
TMCO3-202ENST00000434316 USP44Q9H0E7 712 aa18.05■□□□□ 0.48
TMCO3-202ENST00000434316 KIAA2012Q0VF49 1180 aa18.05■□□□□ 0.48
TMCO3-202ENST00000434316 CCDC30Q5VVM6 783 aa18.05■□□□□ 0.48
TMCO3-202ENST00000434316 USP31Q70CQ4 1352 aa18.05■□□□□ 0.48
TMCO3-202ENST00000434316 JARID2Q92833 1246 aaPredicted RBP18.04■□□□□ 0.48
TMCO3-202ENST00000434316 XRN1Q8IZH2 1706 aaKnown RBP18.04■□□□□ 0.48
TMCO3-202ENST00000434316 CEP170BQ9Y4F5 1589 aaPredicted RBP18.04■□□□□ 0.48
TMCO3-202ENST00000434316 DYNC1I1O14576 645 aa18.04■□□□□ 0.48
TMCO3-202ENST00000434316 PHF14O94880 888 aa18.04■□□□□ 0.48
TMCO3-202ENST00000434316 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
TMCO3-202ENST00000434316 PPP6R1Q9UPN7 881 aa18.03■□□□□ 0.48
TMCO3-202ENST00000434316 C17orf53Q8N3J3 647 aaPredicted RBP18.03■□□□□ 0.48
TMCO3-202ENST00000434316 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
TMCO3-202ENST00000434316 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
TMCO3-202ENST00000434316 UBTFL1P0CB47 393 aaPredicted RBP18.02■□□□□ 0.48
TMCO3-202ENST00000434316 RASEFQ8IZ41 740 aa18.02■□□□□ 0.48
TMCO3-202ENST00000434316 MAP7D2Q96T17 732 aa18.02■□□□□ 0.48
TMCO3-202ENST00000434316 SNX14Q9Y5W7 946 aa18.02■□□□□ 0.48
TMCO3-202ENST00000434316 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
TMCO3-202ENST00000434316 HCLS1P14317 486 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms