RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 JCADQ9P266 1359 aa18.11■□□□□ 0.49
DDX56-205ENST00000433257 CYP2E1P05181 493 aaPredicted RBP18.11■□□□□ 0.49
DDX56-205ENST00000433257 SSFA2P28290 1259 aa18.11■□□□□ 0.49
DDX56-205ENST00000433257 GAS2L3Q86XJ1 694 aa18.11■□□□□ 0.49
DDX56-205ENST00000433257 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
DDX56-205ENST00000433257 USP26Q9BXU7 913 aa18.1■□□□□ 0.49
DDX56-205ENST00000433257 PXDNQ92626 1479 aa18.09■□□□□ 0.49
DDX56-205ENST00000433257 KLHL34Q8N239 644 aa18.09■□□□□ 0.49
DDX56-205ENST00000433257 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
DDX56-205ENST00000433257 SPATA31A3Q5VYP0 1347 aa18.08■□□□□ 0.49
DDX56-205ENST00000433257 COL16A1Q07092 1604 aaPredicted RBP18.08■□□□□ 0.49
DDX56-205ENST00000433257 SBNO1A3KN83 1393 aa18.08■□□□□ 0.49
DDX56-205ENST00000433257 EPB41L2O43491 1005 aaKnown RBP18.08■□□□□ 0.48
DDX56-205ENST00000433257 MBD3O95983 291 aa18.08■□□□□ 0.48
DDX56-205ENST00000433257 MAP7D2Q96T17 732 aa18.08■□□□□ 0.48
DDX56-205ENST00000433257 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
DDX56-205ENST00000433257 GSPT1P15170 499 aaKnown RBP18.07■□□□□ 0.48
DDX56-205ENST00000433257 COG3Q96JB2 828 aa18.07■□□□□ 0.48
DDX56-205ENST00000433257 OFD1O75665 1012 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 CD2BP2O95400 341 aaKnown RBP18.06■□□□□ 0.48
DDX56-205ENST00000433257 CSPP1Q1MSJ5 1256 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 MCCP23508 829 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 TSPYL6Q8N831 410 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 OSBPL3Q9H4L5 887 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 C1orf115Q9H7X2 142 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 ATP10DQ9P241 1426 aa18.06■□□□□ 0.48
DDX56-205ENST00000433257 ARHGEF10O15013 1369 aa18.05■□□□□ 0.48
DDX56-205ENST00000433257 ERBB4Q15303 1308 aa18.05■□□□□ 0.48
DDX56-205ENST00000433257 SPATA31A6Q5VVP1 1343 aa18.05■□□□□ 0.48
DDX56-205ENST00000433257 ERC2O15083 957 aa18.05■□□□□ 0.48
DDX56-205ENST00000433257 USP6P35125 1406 aa18.04■□□□□ 0.48
DDX56-205ENST00000433257 TNS3Q68CZ2 1445 aa18.04■□□□□ 0.48
DDX56-205ENST00000433257 SSH2Q76I76 1423 aa18.04■□□□□ 0.48
DDX56-205ENST00000433257 SYAP1Q96A49 352 aaPredicted RBP18.04■□□□□ 0.48
DDX56-205ENST00000433257 PDCL3Q9H2J4 239 aa18.04■□□□□ 0.48
DDX56-205ENST00000433257 LMBRD1Q9NUN5 540 aa18.04■□□□□ 0.48
DDX56-205ENST00000433257 NUTM2BA6NNL0 878 aaPredicted RBP18.03■□□□□ 0.48
DDX56-205ENST00000433257 NUTM2EB1AL46 878 aaPredicted RBP18.03■□□□□ 0.48
DDX56-205ENST00000433257 HMOX1P09601 288 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 MCTP1Q6DN14 999 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 NUTM2AQ8IVF1 878 aaPredicted RBP18.03■□□□□ 0.48
DDX56-205ENST00000433257 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX56-205ENST00000433257 PDLIM2Q96JY6 352 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 ZNF500O60304 480 aaPredicted RBP18.03■□□□□ 0.48
DDX56-205ENST00000433257 PLEKHG5O94827 1062 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 ANAPC15P60006 121 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 ZSCAN23Q3MJ62 389 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 CEP85Q6P2H3 762 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 MTERF4Q7Z6M4 381 aaKnown RBP18.03■□□□□ 0.48
DDX56-205ENST00000433257 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
DDX56-205ENST00000433257 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.47
DDX56-205ENST00000433257 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.47
DDX56-205ENST00000433257 RTL1A6NKG5 1358 aa18.01■□□□□ 0.47
DDX56-205ENST00000433257 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
DDX56-205ENST00000433257 CCT4P50991 539 aaKnown RBP18.01■□□□□ 0.47
DDX56-205ENST00000433257 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
DDX56-205ENST00000433257 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
DDX56-205ENST00000433257 TTC21AQ8NDW8 1320 aa18■□□□□ 0.47
DDX56-205ENST00000433257 CHL1O00533 1208 aa18■□□□□ 0.47
DDX56-205ENST00000433257 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
DDX56-205ENST00000433257 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
DDX56-205ENST00000433257 CCDC39Q9UFE4 941 aa18■□□□□ 0.47
DDX56-205ENST00000433257 RGS12O14924 1447 aa18■□□□□ 0.47
DDX56-205ENST00000433257 PHF14O94880 888 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 SDSP20132 328 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 NLRP6P59044 892 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
DDX56-205ENST00000433257 CAVIN1Q6NZI2 390 aaKnown RBP17.99■□□□□ 0.47
DDX56-205ENST00000433257 LRSAM1Q6UWE0 723 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 KIAA1211Q6ZU35 1233 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
DDX56-205ENST00000433257 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
DDX56-205ENST00000433257 THUMPD2Q9BTF0 503 aaKnown RBP17.98■□□□□ 0.47
DDX56-205ENST00000433257 SRCIN1Q9C0H9 1055 aa17.98■□□□□ 0.47
DDX56-205ENST00000433257 TRPM3Q9HCF6 1732 aaPredicted RBP17.98■□□□□ 0.47
DDX56-205ENST00000433257 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
DDX56-205ENST00000433257 AOX1Q06278 1338 aa17.97■□□□□ 0.47
DDX56-205ENST00000433257 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
DDX56-205ENST00000433257 ADAMTS2O95450 1211 aa17.96■□□□□ 0.47
DDX56-205ENST00000433257 FAM184AQ8NB25 1140 aa17.95■□□□□ 0.46
DDX56-205ENST00000433257 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
DDX56-205ENST00000433257 CUL4AQ13619 759 aa17.94■□□□□ 0.46
DDX56-205ENST00000433257 NME9Q86XW9 330 aa17.94■□□□□ 0.46
DDX56-205ENST00000433257 ZKSCAN5Q9Y2L8 839 aa17.94■□□□□ 0.46
DDX56-205ENST00000433257 CACNA1FO60840 1977 aa17.94■□□□□ 0.46
DDX56-205ENST00000433257 N4BP2Q86UW6 1770 aaPredicted RBP17.93■□□□□ 0.46
DDX56-205ENST00000433257 ALS2Q96Q42 1657 aa17.93■□□□□ 0.46
DDX56-205ENST00000433257 COL22A1Q8NFW1 1626 aaPredicted RBP17.93■□□□□ 0.46
DDX56-205ENST00000433257 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
DDX56-205ENST00000433257 GNAI3P08754 354 aa17.93■□□□□ 0.46
DDX56-205ENST00000433257 UVSSAQ2YD98 709 aa17.93■□□□□ 0.46
DDX56-205ENST00000433257 LETM1O95202 739 aaPredicted RBP17.92■□□□□ 0.46
DDX56-205ENST00000433257 PDE1AP54750 535 aa17.92■□□□□ 0.46
DDX56-205ENST00000433257 NGLY1Q96IV0 654 aa17.92■□□□□ 0.46
DDX56-205ENST00000433257 C8orf37Q96NL8 207 aa17.92■□□□□ 0.46
DDX56-205ENST00000433257 TUBGCP6Q96RT7 1819 aa17.92■□□□□ 0.46
DDX56-205ENST00000433257 AK9Q5TCS8 1911 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms