RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 PLEKHG1Q9ULL1 1385 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 GSPT1P15170 499 aaKnown RBP9.83□□□□□ -0.84
HPS4-205ENST00000429411 BRINP3Q76B58 766 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 GDPD2Q9HCC8 539 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 PPIP5K1Q6PFW1 1433 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 BAG4O95429 457 aaKnown RBP9.83□□□□□ -0.84
HPS4-205ENST00000429411 RBM25P49756 843 aaKnown RBP9.83□□□□□ -0.84
HPS4-205ENST00000429411 TTC22Q5TAA0 569 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 ABTB2Q8N961 1025 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 DDX54Q8TDD1 881 aaKnown RBP9.83□□□□□ -0.84
HPS4-205ENST00000429411 PIK3C2BO00750 1634 aa9.83□□□□□ -0.84
HPS4-205ENST00000429411 MYOM1P52179 1685 aa9.82□□□□□ -0.84
HPS4-205ENST00000429411 NUCB2P80303 420 aa9.82□□□□□ -0.84
HPS4-205ENST00000429411 HSP90AA2PQ14568 343 aaPredicted RBP9.82□□□□□ -0.84
HPS4-205ENST00000429411 KRT28Q7Z3Y7 464 aa9.82□□□□□ -0.84
HPS4-205ENST00000429411 NUTM1Q86Y26 1132 aa9.82□□□□□ -0.84
HPS4-205ENST00000429411 SURF6O75683 361 aaKnown RBP9.82□□□□□ -0.84
HPS4-205ENST00000429411 ZBTB22O15209 634 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 QRICH2Q9H0J4 1663 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 ACEP12821 1306 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 ERC2O15083 957 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 ANXA1P04083 346 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 KIAA1211Q6ZU35 1233 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 CIZ1Q9ULV3 898 aaPredicted RBP9.81□□□□□ -0.84
HPS4-205ENST00000429411 REREQ9P2R6 1566 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.81□□□□□ -0.84
HPS4-205ENST00000429411 GNAI2P04899 355 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 RAB3GAP1Q15042 981 aa9.81□□□□□ -0.84
HPS4-205ENST00000429411 LMTK2Q8IWU2 1503 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 TULP4Q9NRJ4 1543 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 SYCE3A1L190 88 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 CEP85Q6P2H3 762 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 RPAP2Q8IXW5 612 aaPredicted RBP9.8□□□□□ -0.84
HPS4-205ENST00000429411 PUS7Q96PZ0 661 aaKnown RBP9.8□□□□□ -0.84
HPS4-205ENST00000429411 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
HPS4-205ENST00000429411 MYO3AQ8NEV4 1616 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 PTMSP20962 102 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 SNX21Q969T3 373 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 UBTFL1P0CB47 393 aaPredicted RBP9.8□□□□□ -0.84
HPS4-205ENST00000429411 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 DCTPP1Q9H773 170 aa9.8□□□□□ -0.84
HPS4-205ENST00000429411 ANKRD44Q8N8A2 993 aa9.79□□□□□ -0.84
HPS4-205ENST00000429411 ZNF692Q9BU19 519 aaPredicted RBP9.79□□□□□ -0.84
HPS4-205ENST00000429411 HDGFL1Q5TGJ6 251 aa9.79□□□□□ -0.84
HPS4-205ENST00000429411 LRRCC1Q9C099 1032 aa9.79□□□□□ -0.84
HPS4-205ENST00000429411 R3HCC1Q9Y3T6 440 aaKnown RBP9.79□□□□□ -0.84
HPS4-205ENST00000429411 LRRFIP2Q9Y608 721 aaKnown RBP9.79□□□□□ -0.84
HPS4-205ENST00000429411 EVA1CP58658 441 aa9.79□□□□□ -0.84
HPS4-205ENST00000429411 MTHFSDQ2M296 383 aaKnown RBP9.79□□□□□ -0.84
HPS4-205ENST00000429411 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 SPATA31D1Q6ZQQ2 1576 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 ADAMTS13Q76LX8 1427 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 AIMP1Q12904 312 aaKnown RBP9.78□□□□□ -0.84
HPS4-205ENST00000429411 PRDM11Q9NQV5 511 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 PTPRUQ92729 1446 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 FAM13BQ9NYF5 915 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 PREX1Q8TCU6 1659 aa9.78□□□□□ -0.84
HPS4-205ENST00000429411 LRRC59Q96AG4 307 aaKnown RBP9.77□□□□□ -0.84
HPS4-205ENST00000429411 USP26Q9BXU7 913 aa9.77□□□□□ -0.84
HPS4-205ENST00000429411 ADGRB3O60242 1522 aa9.77□□□□□ -0.84
HPS4-205ENST00000429411 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.84
HPS4-205ENST00000429411 FAM182BQ5T319 152 aa9.77□□□□□ -0.85
HPS4-205ENST00000429411 MX1P20591 662 aa9.77□□□□□ -0.85
HPS4-205ENST00000429411 TEFQ10587 303 aa9.77□□□□□ -0.85
HPS4-205ENST00000429411 FLIIQ13045 1269 aa9.77□□□□□ -0.85
HPS4-205ENST00000429411 ZC3H13Q5T200 1668 aaKnown RBP9.76□□□□□ -0.85
HPS4-205ENST00000429411 SRGAP3O43295 1099 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 PDE1AP54750 535 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 CCDC30Q5VVM6 783 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 CWC27Q6UX04 472 aaKnown RBP9.76□□□□□ -0.85
HPS4-205ENST00000429411 ABCC4O15439 1325 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 FIBPO43427 364 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 CCT4P50991 539 aaKnown RBP9.76□□□□□ -0.85
HPS4-205ENST00000429411 PSMD1Q99460 953 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 KIF2CQ99661 725 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 C9orf78Q9NZ63 289 aaPredicted RBP9.76□□□□□ -0.85
HPS4-205ENST00000429411 FSD2A1L4K1 749 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 VPS37CA5D8V6 355 aaPredicted RBP9.76□□□□□ -0.85
HPS4-205ENST00000429411 GNAI3P08754 354 aa9.76□□□□□ -0.85
HPS4-205ENST00000429411 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
HPS4-205ENST00000429411 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 DIAPH3Q9NSV4 1193 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 NPHP3Q7Z494 1330 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 PNMA6EA0A0J9YXQ4 647 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 CCDC173Q0VFZ6 552 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 TMX3Q96JJ7 454 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 SPG7Q9UQ90 795 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 ADGRB1O14514 1584 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 CLCN1P35523 988 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 KLHL40Q2TBA0 621 aa9.75□□□□□ -0.85
HPS4-205ENST00000429411 FOSBP53539 338 aa9.74□□□□□ -0.85
HPS4-205ENST00000429411 TICAM2Q86XR7 235 aa9.74□□□□□ -0.85
HPS4-205ENST00000429411 SIL1Q9H173 461 aa9.74□□□□□ -0.85
HPS4-205ENST00000429411 MAP3K19Q56UN5 1328 aa9.74□□□□□ -0.85
HPS4-205ENST00000429411 PHAXQ9H814 394 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms