RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 LAMB4A4D0S4 1761 aa14.09□□□□□ -0.15
CRIM1-204ENST00000428774 SBF2Q86WG5 1849 aa14.09□□□□□ -0.15
CRIM1-204ENST00000428774 EXOSC9Q06265 439 aaKnown RBP14.09□□□□□ -0.15
CRIM1-204ENST00000428774 IFNL2Q8IZJ0 200 aa14.09□□□□□ -0.15
CRIM1-204ENST00000428774 RCAN3Q9UKA8 241 aa14.09□□□□□ -0.15
CRIM1-204ENST00000428774 CHL1O00533 1208 aa14.08□□□□□ -0.16
CRIM1-204ENST00000428774 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
CRIM1-204ENST00000428774 RNF123Q5XPI4 1314 aa14.07□□□□□ -0.16
CRIM1-204ENST00000428774 CDCA7Q9BWT1 371 aaPredicted RBP14.06□□□□□ -0.16
CRIM1-204ENST00000428774 HSP90AB1P08238 724 aaKnown RBP14.05□□□□□ -0.16
CRIM1-204ENST00000428774 TEFQ10587 303 aa14.05□□□□□ -0.16
CRIM1-204ENST00000428774 NKX1-1Q15270 411 aaPredicted RBP14.05□□□□□ -0.16
CRIM1-204ENST00000428774 DDB1Q16531 1140 aa14.05□□□□□ -0.16
CRIM1-204ENST00000428774 MARCH10Q8NA82 808 aaPredicted RBP14.05□□□□□ -0.16
CRIM1-204ENST00000428774 DCAF5Q96JK2 942 aa14.05□□□□□ -0.16
CRIM1-204ENST00000428774 MIS18AQ9NYP9 233 aa14.05□□□□□ -0.16
CRIM1-204ENST00000428774 TSPYL4Q9UJ04 414 aa14.05□□□□□ -0.16
CRIM1-204ENST00000428774 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
CRIM1-204ENST00000428774 KRT24Q2M2I5 525 aa14.04□□□□□ -0.16
CRIM1-204ENST00000428774 TSPYL6Q8N831 410 aa14.04□□□□□ -0.16
CRIM1-204ENST00000428774 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
CRIM1-204ENST00000428774 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
CRIM1-204ENST00000428774 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
CRIM1-204ENST00000428774 CT47B1P0C2W7 299 aaPredicted RBP14.03□□□□□ -0.16
CRIM1-204ENST00000428774 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
CRIM1-204ENST00000428774 KRT27Q7Z3Y8 459 aa14.03□□□□□ -0.16
CRIM1-204ENST00000428774 C8orf58Q8NAV2 365 aa14.03□□□□□ -0.16
CRIM1-204ENST00000428774 SLC52A2Q9HAB3 445 aa14.03□□□□□ -0.16
CRIM1-204ENST00000428774 BABAM1Q9NWV8 329 aa14.03□□□□□ -0.16
CRIM1-204ENST00000428774 TNS1Q9HBL0 1735 aaKnown RBP14.03□□□□□ -0.16
CRIM1-204ENST00000428774 EXOC5O00471 708 aa14.02□□□□□ -0.17
CRIM1-204ENST00000428774 KCNQ3O43525 872 aa14.01□□□□□ -0.17
CRIM1-204ENST00000428774 RARSP54136 660 aaKnown RBP14.01□□□□□ -0.17
CRIM1-204ENST00000428774 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
CRIM1-204ENST00000428774 TJP1Q07157 1748 aa14.01□□□□□ -0.17
CRIM1-204ENST00000428774 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
CRIM1-204ENST00000428774 BTAF1O14981 1849 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 BTBD11A6QL63 1104 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 VAMP4O75379 141 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 BCAR3O75815 825 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 PTF1AQ7RTS3 328 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 BCL2L13Q9BXK5 485 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 N4BP2Q86UW6 1770 aaPredicted RBP14□□□□□ -0.17
CRIM1-204ENST00000428774 EP400Q96L91 3159 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 KAT6BQ8WYB5 2073 aa14□□□□□ -0.17
CRIM1-204ENST00000428774 ELL2O00472 640 aaPredicted RBP13.99□□□□□ -0.17
CRIM1-204ENST00000428774 CABP4P57796 275 aa13.99□□□□□ -0.17
CRIM1-204ENST00000428774 EIF4A1P60842 406 aaKnown RBP13.99□□□□□ -0.17
CRIM1-204ENST00000428774 HEG1Q9ULI3 1381 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
CRIM1-204ENST00000428774 NFATC2IPQ8NCF5 419 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 SSH1Q8WYL5 1049 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 ACSBG1Q96GR2 724 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 BCL9O00512 1426 aa13.98□□□□□ -0.17
CRIM1-204ENST00000428774 PLIN1O60240 522 aa13.97□□□□□ -0.17
CRIM1-204ENST00000428774 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
CRIM1-204ENST00000428774 KCNQ2O43526 872 aa13.96□□□□□ -0.17
CRIM1-204ENST00000428774 NEFLP07196 543 aa13.96□□□□□ -0.17
CRIM1-204ENST00000428774 ALDH1L2Q3SY69 923 aa13.96□□□□□ -0.17
CRIM1-204ENST00000428774 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
CRIM1-204ENST00000428774 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.17
CRIM1-204ENST00000428774 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
CRIM1-204ENST00000428774 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
CRIM1-204ENST00000428774 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
CRIM1-204ENST00000428774 TMOD3Q9NYL9 352 aa13.95□□□□□ -0.18
CRIM1-204ENST00000428774 ZNF831Q5JPB2 1677 aa13.95□□□□□ -0.18
CRIM1-204ENST00000428774 COL5A3P25940 1745 aaPredicted RBP13.94□□□□□ -0.18
CRIM1-204ENST00000428774 MRPL50Q8N5N7 158 aaKnown RBP13.94□□□□□ -0.18
CRIM1-204ENST00000428774 KIF16BQ96L93 1317 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 LY75O60449 1722 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 PRAMEF22A3QJZ6 481 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 TRIM37O94972 964 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 HOXB7P09629 217 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 FKBP8Q14318 412 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 C20orf194Q5TEA3 1177 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 PIGBQ92521 554 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
CRIM1-204ENST00000428774 TNNQ9UQP3 1299 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 RREB1Q92766 1687 aa13.93□□□□□ -0.18
CRIM1-204ENST00000428774 GIGYF1O75420 1035 aaPredicted RBP13.92□□□□□ -0.18
CRIM1-204ENST00000428774 BRPF1P55201 1214 aaPredicted RBP13.92□□□□□ -0.18
CRIM1-204ENST00000428774 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
CRIM1-204ENST00000428774 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
CRIM1-204ENST00000428774 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.92□□□□□ -0.18
CRIM1-204ENST00000428774 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
CRIM1-204ENST00000428774 HDGFL1Q5TGJ6 251 aa13.91□□□□□ -0.18
CRIM1-204ENST00000428774 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
CRIM1-204ENST00000428774 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
CRIM1-204ENST00000428774 NUP188Q5SRE5 1749 aa13.9□□□□□ -0.18
CRIM1-204ENST00000428774 CANXP27824 592 aaKnown RBP13.9□□□□□ -0.18
CRIM1-204ENST00000428774 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
CRIM1-204ENST00000428774 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
CRIM1-204ENST00000428774 ARFGEF2Q9Y6D5 1785 aa13.9□□□□□ -0.18
CRIM1-204ENST00000428774 ZKSCAN2Q63HK3 967 aa13.89□□□□□ -0.19
CRIM1-204ENST00000428774 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
CRIM1-204ENST00000428774 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
CRIM1-204ENST00000428774 ASAP1Q9ULH1 1129 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms