RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 ZNF831Q5JPB2 1677 aa29.81■■■□□ 2.36
PTCHD3P2-201ENST00000424937 LOC102724428A0A0B4J2F2 783 aa29.8■■■□□ 2.36
PTCHD3P2-201ENST00000424937 SIK1P57059 783 aa29.8■■■□□ 2.36
PTCHD3P2-201ENST00000424937 RNMTO43148 476 aaKnown RBP29.79■■■□□ 2.36
PTCHD3P2-201ENST00000424937 NFATC2IPQ8NCF5 419 aa29.79■■■□□ 2.36
PTCHD3P2-201ENST00000424937 PHACTR3Q96KR7 559 aa29.79■■■□□ 2.36
PTCHD3P2-201ENST00000424937 LGR6Q9HBX8 967 aa29.79■■■□□ 2.36
PTCHD3P2-201ENST00000424937 UBR3Q6ZT12 1888 aa29.78■■■□□ 2.36
PTCHD3P2-201ENST00000424937 SIPA1L3O60292 1781 aaPredicted RBP29.78■■■□□ 2.36
PTCHD3P2-201ENST00000424937 FCHSD2O94868 740 aa29.78■■■□□ 2.36
PTCHD3P2-201ENST00000424937 TFCP2L1Q9NZI6 479 aa29.78■■■□□ 2.36
PTCHD3P2-201ENST00000424937 COL5A3P25940 1745 aaPredicted RBP29.78■■■□□ 2.36
PTCHD3P2-201ENST00000424937 DLG5Q8TDM6 1919 aa29.78■■■□□ 2.36
PTCHD3P2-201ENST00000424937 ZBTB7AO95365 584 aa29.76■■■□□ 2.35
PTCHD3P2-201ENST00000424937 SLC52A2Q9HAB3 445 aa29.76■■■□□ 2.35
PTCHD3P2-201ENST00000424937 GNAT3A8MTJ3 354 aa29.75■■■□□ 2.35
PTCHD3P2-201ENST00000424937 RBM42Q9BTD8 480 aaKnown RBP29.75■■■□□ 2.35
PTCHD3P2-201ENST00000424937 PRKRIP1Q9H875 184 aaPredicted RBP29.75■■■□□ 2.35
PTCHD3P2-201ENST00000424937 SPON1Q9HCB6 807 aa29.75■■■□□ 2.35
PTCHD3P2-201ENST00000424937 PNPLA7Q6ZV29 1317 aa29.74■■■□□ 2.35
PTCHD3P2-201ENST00000424937 HMGB2P26583 209 aaKnown RBP29.73■■■□□ 2.35
PTCHD3P2-201ENST00000424937 ATP6V1AP38606 617 aa29.73■■■□□ 2.35
PTCHD3P2-201ENST00000424937 TJP1Q07157 1748 aa29.73■■■□□ 2.35
PTCHD3P2-201ENST00000424937 UBR2Q8IWV8 1755 aa29.72■■■□□ 2.35
PTCHD3P2-201ENST00000424937 CICQ96RK0 1608 aaPredicted RBP29.71■■■□□ 2.35
PTCHD3P2-201ENST00000424937 ITPK1Q13572 414 aa29.71■■■□□ 2.35
PTCHD3P2-201ENST00000424937 LINC00116Q8NCU8 138 aa29.71■■■□□ 2.35
PTCHD3P2-201ENST00000424937 AK7Q96M32 723 aa29.71■■■□□ 2.35
PTCHD3P2-201ENST00000424937 NEFMP07197 916 aa29.69■■■□□ 2.34
PTCHD3P2-201ENST00000424937 MTFR1LQ9H019 292 aa29.69■■■□□ 2.34
PTCHD3P2-201ENST00000424937 ATF5Q9Y2D1 282 aaPredicted RBP29.69■■■□□ 2.34
PTCHD3P2-201ENST00000424937 PTCD1O75127 700 aaKnown RBP29.68■■■□□ 2.34
PTCHD3P2-201ENST00000424937 SLC4A9Q96Q91 983 aa29.68■■■□□ 2.34
PTCHD3P2-201ENST00000424937 IL17REQ8NFR9 667 aa29.67■■■□□ 2.34
PTCHD3P2-201ENST00000424937 COL24A1Q17RW2 1714 aa29.67■■■□□ 2.34
PTCHD3P2-201ENST00000424937 KCPQ6ZWJ8 1503 aa29.66■■■□□ 2.34
PTCHD3P2-201ENST00000424937 TEFQ10587 303 aa29.66■■■□□ 2.34
PTCHD3P2-201ENST00000424937 PPP1R1BQ9UD71 204 aaPredicted RBP29.66■■■□□ 2.34
PTCHD3P2-201ENST00000424937 MYH14Q7Z406 1995 aaKnown RBP29.66■■■□□ 2.34
PTCHD3P2-201ENST00000424937 CEMIPQ8WUJ3 1361 aa29.65■■■□□ 2.34
PTCHD3P2-201ENST00000424937 MSH5O43196 834 aa29.65■■■□□ 2.34
PTCHD3P2-201ENST00000424937 SLC39A6Q13433 755 aa29.65■■■□□ 2.34
PTCHD3P2-201ENST00000424937 PLEKHF1Q96S99 279 aa29.64■■■□□ 2.34
PTCHD3P2-201ENST00000424937 COL23A1Q86Y22 540 aaPredicted RBP29.63■■■□□ 2.33
PTCHD3P2-201ENST00000424937 RTF1Q92541 710 aaKnown RBP29.63■■■□□ 2.33
PTCHD3P2-201ENST00000424937 PNNQ9H307 717 aaKnown RBP29.63■■■□□ 2.33
PTCHD3P2-201ENST00000424937 MAPK8IP3Q9UPT6 1336 aa29.63■■■□□ 2.33
PTCHD3P2-201ENST00000424937 GNPATO15228 680 aa29.62■■■□□ 2.33
PTCHD3P2-201ENST00000424937 PHF14O94880 888 aa29.62■■■□□ 2.33
PTCHD3P2-201ENST00000424937 PTGER2P43116 358 aa29.62■■■□□ 2.33
PTCHD3P2-201ENST00000424937 SLC16A10Q8TF71 515 aa29.62■■■□□ 2.33
PTCHD3P2-201ENST00000424937 MCM10Q7L590 875 aa29.6■■■□□ 2.33
PTCHD3P2-201ENST00000424937 AMIGO3Q86WK7 504 aa29.6■■■□□ 2.33
PTCHD3P2-201ENST00000424937 FLAD1Q8NFF5 587 aa29.6■■■□□ 2.33
PTCHD3P2-201ENST00000424937 WDR43Q15061 677 aaKnown RBP eCLIP29.59■■■□□ 2.33
PTCHD3P2-201ENST00000424937 SMIM5Q71RC9 77 aa29.59■■■□□ 2.33
PTCHD3P2-201ENST00000424937 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.58■■■□□ 2.33
PTCHD3P2-201ENST00000424937 C4AP0C0L4 1744 aa29.58■■■□□ 2.33
PTCHD3P2-201ENST00000424937 TTC5Q8N0Z6 440 aa29.58■■■□□ 2.33
PTCHD3P2-201ENST00000424937 CNTNAP4Q9C0A0 1308 aa29.58■■■□□ 2.33
PTCHD3P2-201ENST00000424937 SSFA2P28290 1259 aa29.57■■■□□ 2.32
PTCHD3P2-201ENST00000424937 DCTN1Q14203 1278 aa29.57■■■□□ 2.32
PTCHD3P2-201ENST00000424937 SGIP1Q9BQI5 828 aa29.57■■■□□ 2.32
PTCHD3P2-201ENST00000424937 HTATSF1O43719 755 aaKnown RBP29.56■■■□□ 2.32
PTCHD3P2-201ENST00000424937 NFE2L2Q16236 605 aa29.56■■■□□ 2.32
PTCHD3P2-201ENST00000424937 RC3H1Q5TC82 1133 aaKnown RBP29.54■■■□□ 2.32
PTCHD3P2-201ENST00000424937 CRKLP46109 303 aaKnown RBP29.53■■■□□ 2.32
PTCHD3P2-201ENST00000424937 MSL1Q68DK7 614 aa29.53■■■□□ 2.32
PTCHD3P2-201ENST00000424937 ZNF790Q6PG37 636 aa29.53■■■□□ 2.32
PTCHD3P2-201ENST00000424937 DNAJC10Q8IXB1 793 aa29.53■■■□□ 2.32
PTCHD3P2-201ENST00000424937 RTCBQ9Y3I0 505 aaKnown RBP29.53■■■□□ 2.32
PTCHD3P2-201ENST00000424937 BTBD11A6QL63 1104 aa29.52■■■□□ 2.32
PTCHD3P2-201ENST00000424937 CCDC146Q8IYE0 955 aa29.52■■■□□ 2.32
PTCHD3P2-201ENST00000424937 POLD1P28340 1107 aa29.51■■■□□ 2.31
PTCHD3P2-201ENST00000424937 KDM3BQ7LBC6 1761 aa29.51■■■□□ 2.31
PTCHD3P2-201ENST00000424937 ANP32CO43423 234 aa29.5■■■□□ 2.31
PTCHD3P2-201ENST00000424937 VSIG10Q8N0Z9 540 aa29.49■■■□□ 2.31
PTCHD3P2-201ENST00000424937 ZNF496Q96IT1 587 aaPredicted RBP29.49■■■□□ 2.31
PTCHD3P2-201ENST00000424937 ARXQ96QS3 562 aa29.49■■■□□ 2.31
PTCHD3P2-201ENST00000424937 ADAMTS8Q9UP79 889 aa29.48■■■□□ 2.31
PTCHD3P2-201ENST00000424937 HEG1Q9ULI3 1381 aa29.48■■■□□ 2.31
PTCHD3P2-201ENST00000424937 KCNQ3O43525 872 aa29.47■■■□□ 2.31
PTCHD3P2-201ENST00000424937 RPS6KA4O75676 772 aa29.47■■■□□ 2.31
PTCHD3P2-201ENST00000424937 CYP19A1P11511 503 aaPredicted RBP29.46■■■□□ 2.31
PTCHD3P2-201ENST00000424937 TRAPPC3LQ5T215 181 aa29.46■■■□□ 2.31
PTCHD3P2-201ENST00000424937 FMNL2Q96PY5 1086 aa29.46■■■□□ 2.31
PTCHD3P2-201ENST00000424937 CCDC87Q9NVE4 849 aa29.46■■■□□ 2.31
PTCHD3P2-201ENST00000424937 ADRA2BP18089 450 aa29.45■■■□□ 2.31
PTCHD3P2-201ENST00000424937 INTS5Q6P9B9 1019 aaKnown RBP29.45■■■□□ 2.31
PTCHD3P2-201ENST00000424937 RUNDC1Q96C34 613 aa29.45■■■□□ 2.31
PTCHD3P2-201ENST00000424937 THUMPD2Q9BTF0 503 aaKnown RBP29.45■■■□□ 2.31
PTCHD3P2-201ENST00000424937 TMPOP42166 694 aaKnown RBP29.44■■■□□ 2.3
PTCHD3P2-201ENST00000424937 RIPK4P57078 832 aa29.44■■■□□ 2.3
PTCHD3P2-201ENST00000424937 TAF7Q15545 349 aaPredicted RBP29.44■■■□□ 2.3
PTCHD3P2-201ENST00000424937 FHDC1Q9C0D6 1143 aaPredicted RBP29.44■■■□□ 2.3
PTCHD3P2-201ENST00000424937 CCDC184Q52MB2 194 aa29.43■■■□□ 2.3
PTCHD3P2-201ENST00000424937 ARHGEF1Q92888 912 aaKnown RBP29.43■■■□□ 2.3
PTCHD3P2-201ENST00000424937 RRP7AQ9Y3A4 280 aaKnown RBP29.43■■■□□ 2.3
PTCHD3P2-201ENST00000424937 LAMB4A4D0S4 1761 aa29.43■■■□□ 2.3
PTCHD3P2-201ENST00000424937 RFC4P35249 363 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms