RNA–Protein interactions for RNA: ENST00000421368.2

MSL3-208, Transcript of MSL complex subunit 3, humanhuman

TSL 5

Gene MSL3, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-208ENST00000421368 NFATC2IPQ8NCF5 419 aa23.74■■□□□ 1.39
MSL3-208ENST00000421368 STK32BQ9NY57 414 aa23.74■■□□□ 1.39
MSL3-208ENST00000421368 ZNF831Q5JPB2 1677 aa23.73■■□□□ 1.39
MSL3-208ENST00000421368 GNAT3A8MTJ3 354 aa23.73■■□□□ 1.39
MSL3-208ENST00000421368 SLC15A2Q16348 729 aa23.73■■□□□ 1.39
MSL3-208ENST00000421368 ZNF827Q17R98 1081 aa23.72■■□□□ 1.39
MSL3-208ENST00000421368 PLEKHF1Q96S99 279 aa23.72■■□□□ 1.39
MSL3-208ENST00000421368 SLC52A2Q9HAB3 445 aa23.72■■□□□ 1.39
MSL3-208ENST00000421368 C4BP0C0L5 1744 aa23.7■■□□□ 1.39
MSL3-208ENST00000421368 IL17REQ8NFR9 667 aa23.7■■□□□ 1.38
MSL3-208ENST00000421368 AKT1S1Q96B36 256 aa23.7■■□□□ 1.38
MSL3-208ENST00000421368 LOC102724428A0A0B4J2F2 783 aa23.69■■□□□ 1.38
MSL3-208ENST00000421368 SIK1P57059 783 aa23.69■■□□□ 1.38
MSL3-208ENST00000421368 UBR2Q8IWV8 1755 aa23.69■■□□□ 1.38
MSL3-208ENST00000421368 COL5A3P25940 1745 aaPredicted RBP23.69■■□□□ 1.38
MSL3-208ENST00000421368 LRP5O75197 1615 aa23.69■■□□□ 1.38
MSL3-208ENST00000421368 UBR3Q6ZT12 1888 aa23.68■■□□□ 1.38
MSL3-208ENST00000421368 CEMIPQ8WUJ3 1361 aa23.67■■□□□ 1.38
MSL3-208ENST00000421368 ANP32CO43423 234 aa23.67■■□□□ 1.38
MSL3-208ENST00000421368 PDGFDQ9GZP0 370 aaPredicted RBP23.67■■□□□ 1.38
MSL3-208ENST00000421368 TJP1Q07157 1748 aa23.67■■□□□ 1.38
MSL3-208ENST00000421368 CICQ96RK0 1608 aaPredicted RBP23.66■■□□□ 1.38
MSL3-208ENST00000421368 NEFMP07197 916 aa23.66■■□□□ 1.38
MSL3-208ENST00000421368 PNNQ9H307 717 aaKnown RBP23.66■■□□□ 1.38
MSL3-208ENST00000421368 WDR43Q15061 677 aaKnown RBP eCLIP23.65■■□□□ 1.38
MSL3-208ENST00000421368 SLC4A9Q96Q91 983 aa23.65■■□□□ 1.38
MSL3-208ENST00000421368 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
MSL3-208ENST00000421368 MAPK8IP3Q9UPT6 1336 aa23.64■■□□□ 1.38
MSL3-208ENST00000421368 ATP6V1AP38606 617 aa23.64■■□□□ 1.37
MSL3-208ENST00000421368 ITPK1Q13572 414 aa23.64■■□□□ 1.37
MSL3-208ENST00000421368 CCDC184Q52MB2 194 aa23.64■■□□□ 1.37
MSL3-208ENST00000421368 RBM42Q9BTD8 480 aaKnown RBP23.64■■□□□ 1.37
MSL3-208ENST00000421368 KCPQ6ZWJ8 1503 aa23.64■■□□□ 1.37
MSL3-208ENST00000421368 TEFQ10587 303 aa23.63■■□□□ 1.37
MSL3-208ENST00000421368 NFE2L2Q16236 605 aa23.63■■□□□ 1.37
MSL3-208ENST00000421368 LINC00116Q8NCU8 138 aa23.63■■□□□ 1.37
MSL3-208ENST00000421368 ADAMTS8Q9UP79 889 aa23.63■■□□□ 1.37
MSL3-208ENST00000421368 PTCD1O75127 700 aaKnown RBP23.62■■□□□ 1.37
MSL3-208ENST00000421368 SLC39A6Q13433 755 aa23.62■■□□□ 1.37
MSL3-208ENST00000421368 MCM10Q7L590 875 aa23.62■■□□□ 1.37
MSL3-208ENST00000421368 HTATSF1O43719 755 aaKnown RBP23.61■■□□□ 1.37
MSL3-208ENST00000421368 DCTN1Q14203 1278 aa23.61■■□□□ 1.37
MSL3-208ENST00000421368 RTF1Q92541 710 aaKnown RBP23.61■■□□□ 1.37
MSL3-208ENST00000421368 TFCP2L1Q9NZI6 479 aa23.61■■□□□ 1.37
MSL3-208ENST00000421368 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
MSL3-208ENST00000421368 HMGB2P26583 209 aaKnown RBP23.6■■□□□ 1.37
MSL3-208ENST00000421368 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
MSL3-208ENST00000421368 COL24A1Q17RW2 1714 aa23.57■■□□□ 1.36
MSL3-208ENST00000421368 RUNDC1Q96C34 613 aa23.57■■□□□ 1.36
MSL3-208ENST00000421368 ZBTB7AO95365 584 aa23.56■■□□□ 1.36
MSL3-208ENST00000421368 AK7Q96M32 723 aa23.56■■□□□ 1.36
MSL3-208ENST00000421368 KDM3BQ7LBC6 1761 aa23.55■■□□□ 1.36
MSL3-208ENST00000421368 TMPOP42166 694 aaKnown RBP23.55■■□□□ 1.36
MSL3-208ENST00000421368 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
MSL3-208ENST00000421368 ZNF790Q6PG37 636 aa23.54■■□□□ 1.36
MSL3-208ENST00000421368 BTBD11A6QL63 1104 aa23.53■■□□□ 1.36
MSL3-208ENST00000421368 RIPK4P57078 832 aa23.53■■□□□ 1.36
MSL3-208ENST00000421368 COL23A1Q86Y22 540 aaPredicted RBP23.53■■□□□ 1.36
MSL3-208ENST00000421368 TTC5Q8N0Z6 440 aa23.53■■□□□ 1.36
MSL3-208ENST00000421368 THUMPD2Q9BTF0 503 aaKnown RBP23.53■■□□□ 1.36
MSL3-208ENST00000421368 SPON1Q9HCB6 807 aa23.53■■□□□ 1.36
MSL3-208ENST00000421368 MRS2Q9HD23 443 aa23.53■■□□□ 1.36
MSL3-208ENST00000421368 KCNQ3O43525 872 aa23.52■■□□□ 1.36
MSL3-208ENST00000421368 SMIM5Q71RC9 77 aa23.52■■□□□ 1.36
MSL3-208ENST00000421368 DNAJC10Q8IXB1 793 aa23.52■■□□□ 1.36
MSL3-208ENST00000421368 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
MSL3-208ENST00000421368 CNTNAP4Q9C0A0 1308 aa23.52■■□□□ 1.36
MSL3-208ENST00000421368 C4AP0C0L4 1744 aa23.51■■□□□ 1.35
MSL3-208ENST00000421368 GNPATO15228 680 aa23.51■■□□□ 1.35
MSL3-208ENST00000421368 RC3H1Q5TC82 1133 aaKnown RBP23.51■■□□□ 1.35
MSL3-208ENST00000421368 ZNF496Q96IT1 587 aaPredicted RBP23.51■■□□□ 1.35
MSL3-208ENST00000421368 MTFR1LQ9H019 292 aa23.51■■□□□ 1.35
MSL3-208ENST00000421368 ATF5Q9Y2D1 282 aaPredicted RBP23.51■■□□□ 1.35
MSL3-208ENST00000421368 TAF7Q15545 349 aaPredicted RBP23.5■■□□□ 1.35
MSL3-208ENST00000421368 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
MSL3-208ENST00000421368 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
MSL3-208ENST00000421368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.49■■□□□ 1.35
MSL3-208ENST00000421368 PHF14O94880 888 aa23.49■■□□□ 1.35
MSL3-208ENST00000421368 SSFA2P28290 1259 aa23.49■■□□□ 1.35
MSL3-208ENST00000421368 NEUROD2Q15784 382 aa23.49■■□□□ 1.35
MSL3-208ENST00000421368 FLAD1Q8NFF5 587 aa23.49■■□□□ 1.35
MSL3-208ENST00000421368 SLC16A10Q8TF71 515 aa23.49■■□□□ 1.35
MSL3-208ENST00000421368 HEG1Q9ULI3 1381 aa23.49■■□□□ 1.35
MSL3-208ENST00000421368 MSH5O43196 834 aa23.48■■□□□ 1.35
MSL3-208ENST00000421368 PTGER2P43116 358 aa23.48■■□□□ 1.35
MSL3-208ENST00000421368 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
MSL3-208ENST00000421368 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
MSL3-208ENST00000421368 FMNL2Q96PY5 1086 aa23.47■■□□□ 1.35
MSL3-208ENST00000421368 CYP19A1P11511 503 aaPredicted RBP23.46■■□□□ 1.35
MSL3-208ENST00000421368 SGIP1Q9BQI5 828 aa23.46■■□□□ 1.35
MSL3-208ENST00000421368 MIS18AQ9NYP9 233 aa23.46■■□□□ 1.35
MSL3-208ENST00000421368 TRIM35Q9UPQ4 493 aa23.46■■□□□ 1.35
MSL3-208ENST00000421368 RTCBQ9Y3I0 505 aaKnown RBP23.46■■□□□ 1.35
MSL3-208ENST00000421368 RPS6KA4O75676 772 aa23.45■■□□□ 1.34
MSL3-208ENST00000421368 INTS5Q6P9B9 1019 aaKnown RBP23.45■■□□□ 1.34
MSL3-208ENST00000421368 LAMB4A4D0S4 1761 aa23.45■■□□□ 1.34
MSL3-208ENST00000421368 APAF1O14727 1248 aa23.44■■□□□ 1.34
MSL3-208ENST00000421368 CCDC87Q9NVE4 849 aa23.44■■□□□ 1.34
MSL3-208ENST00000421368 ADRA2BP18089 450 aa23.41■■□□□ 1.34
MSL3-208ENST00000421368 TRAPPC3LQ5T215 181 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms