RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 LY75O60449 1722 aa35.7■■■■□ 3.31
FAAP20-207ENST00000420515 APBA3O96018 575 aa35.68■■■■□ 3.3
FAAP20-207ENST00000420515 RGPD3A6NKT7 1758 aaPredicted RBP35.67■■■■□ 3.3
FAAP20-207ENST00000420515 RGPD4Q7Z3J3 1758 aa35.67■■■■□ 3.3
FAAP20-207ENST00000420515 TEFQ10587 303 aa35.67■■■■□ 3.3
FAAP20-207ENST00000420515 ASAP1Q9ULH1 1129 aa35.67■■■■□ 3.3
FAAP20-207ENST00000420515 LMOD3Q0VAK6 560 aa35.66■■■■□ 3.3
FAAP20-207ENST00000420515 DEFB132Q7Z7B7 95 aa35.66■■■■□ 3.3
FAAP20-207ENST00000420515 KDM3BQ7LBC6 1761 aa35.65■■■■□ 3.3
FAAP20-207ENST00000420515 UBR2Q8IWV8 1755 aa35.65■■■■□ 3.3
FAAP20-207ENST00000420515 ATG3Q9NT62 314 aa35.63■■■■□ 3.29
FAAP20-207ENST00000420515 SLC39A6Q13433 755 aa35.62■■■■□ 3.29
FAAP20-207ENST00000420515 SF3B2Q13435 895 aaKnown RBP35.62■■■■□ 3.29
FAAP20-207ENST00000420515 CCDC125Q86Z20 511 aa35.62■■■■□ 3.29
FAAP20-207ENST00000420515 EN1Q05925 392 aaPredicted RBP35.61■■■■□ 3.29
FAAP20-207ENST00000420515 RREB1Q92766 1687 aa35.61■■■■□ 3.29
FAAP20-207ENST00000420515 WWC1Q8IX03 1113 aa35.6■■■■□ 3.29
FAAP20-207ENST00000420515 MIS18AQ9NYP9 233 aa35.6■■■■□ 3.29
FAAP20-207ENST00000420515 PALLDQ8WX93 1383 aa35.59■■■■□ 3.29
FAAP20-207ENST00000420515 CCDC27Q2M243 656 aa35.59■■■■□ 3.29
FAAP20-207ENST00000420515 KCPQ6ZWJ8 1503 aa35.59■■■■□ 3.29
FAAP20-207ENST00000420515 KCNQ3O43525 872 aa35.57■■■■□ 3.29
FAAP20-207ENST00000420515 BTBD11A6QL63 1104 aa35.57■■■■□ 3.28
FAAP20-207ENST00000420515 PLSCR1O15162 318 aa35.57■■■■□ 3.28
FAAP20-207ENST00000420515 EZH2Q15910 746 aaKnown RBP35.57■■■■□ 3.28
FAAP20-207ENST00000420515 BAG6P46379 1132 aa35.56■■■■□ 3.28
FAAP20-207ENST00000420515 TAF7Q15545 349 aaPredicted RBP35.56■■■■□ 3.28
FAAP20-207ENST00000420515 CAMKK2Q96RR4 588 aa35.56■■■■□ 3.28
FAAP20-207ENST00000420515 NUP188Q5SRE5 1749 aa35.55■■■■□ 3.28
FAAP20-207ENST00000420515 NCBP3Q53F19 620 aaKnown RBP35.55■■■■□ 3.28
FAAP20-207ENST00000420515 PROM2Q8N271 834 aa35.55■■■■□ 3.28
FAAP20-207ENST00000420515 TAF1LQ8IZX4 1826 aa35.54■■■■□ 3.28
FAAP20-207ENST00000420515 SOCS7O14512 581 aa35.54■■■■□ 3.28
FAAP20-207ENST00000420515 KCNQ4P56696 695 aa35.54■■■■□ 3.28
FAAP20-207ENST00000420515 TJP1Q07157 1748 aa35.53■■■■□ 3.28
FAAP20-207ENST00000420515 ZNF790Q6PG37 636 aa35.52■■■■□ 3.28
FAAP20-207ENST00000420515 ZNF521Q96K83 1311 aa35.51■■■■□ 3.28
FAAP20-207ENST00000420515 SLC4A9Q96Q91 983 aa35.51■■■■□ 3.27
FAAP20-207ENST00000420515 LAS1LQ9Y4W2 734 aaKnown RBP35.51■■■■□ 3.27
FAAP20-207ENST00000420515 PTCD1O75127 700 aaKnown RBP35.5■■■■□ 3.27
FAAP20-207ENST00000420515 SMARCC1Q92922 1105 aaPredicted RBP35.5■■■■□ 3.27
FAAP20-207ENST00000420515 C5P01031 1676 aa35.5■■■■□ 3.27
FAAP20-207ENST00000420515 ZNF831Q5JPB2 1677 aa35.49■■■■□ 3.27
FAAP20-207ENST00000420515 TXNRD1Q16881 649 aa35.49■■■■□ 3.27
FAAP20-207ENST00000420515 LRRC4BQ9NT99 713 aa35.49■■■■□ 3.27
FAAP20-207ENST00000420515 HNRNPUQ00839 825 aaKnown RBP eCLIP35.48■■■■□ 3.27
FAAP20-207ENST00000420515 RBM42Q9BTD8 480 aaKnown RBP35.47■■■■□ 3.27
FAAP20-207ENST00000420515 COL5A3P25940 1745 aaPredicted RBP35.47■■■■□ 3.27
FAAP20-207ENST00000420515 TSPYL4Q9UJ04 414 aa35.47■■■■□ 3.27
FAAP20-207ENST00000420515 CICQ96RK0 1608 aaPredicted RBP35.46■■■■□ 3.27
FAAP20-207ENST00000420515 LOC102724428A0A0B4J2F2 783 aa35.46■■■■□ 3.27
FAAP20-207ENST00000420515 ZNF853P0CG23 659 aa35.46■■■■□ 3.27
FAAP20-207ENST00000420515 SIK1P57059 783 aa35.46■■■■□ 3.27
FAAP20-207ENST00000420515 TTC5Q8N0Z6 440 aa35.46■■■■□ 3.27
FAAP20-207ENST00000420515 NGEFQ8N5V2 710 aa35.46■■■■□ 3.27
FAAP20-207ENST00000420515 ZNF496Q96IT1 587 aaPredicted RBP35.46■■■■□ 3.27
FAAP20-207ENST00000420515 SPINK5Q9NQ38 1064 aaPredicted RBP35.46■■■■□ 3.27
FAAP20-207ENST00000420515 CHL1O00533 1208 aa35.45■■■■□ 3.27
FAAP20-207ENST00000420515 CFAP44Q96MT7 982 aa35.44■■■■□ 3.26
FAAP20-207ENST00000420515 CCNL1Q9UK58 526 aaPredicted RBP35.44■■■■□ 3.26
FAAP20-207ENST00000420515 MBIPQ9NS73 344 aa35.42■■■■□ 3.26
FAAP20-207ENST00000420515 IFT57Q9NWB7 429 aa35.42■■■■□ 3.26
FAAP20-207ENST00000420515 ITPK1Q13572 414 aa35.42■■■■□ 3.26
FAAP20-207ENST00000420515 WDR63Q8IWG1 891 aa35.42■■■■□ 3.26
FAAP20-207ENST00000420515 CALD1Q05682 793 aaKnown RBP35.41■■■■□ 3.26
FAAP20-207ENST00000420515 ATP6V1AP38606 617 aa35.4■■■■□ 3.26
FAAP20-207ENST00000420515 PRAMEF22A3QJZ6 481 aa35.39■■■■□ 3.26
FAAP20-207ENST00000420515 EIF4A1P60842 406 aaKnown RBP35.39■■■■□ 3.26
FAAP20-207ENST00000420515 TSR2Q969E8 191 aaKnown RBP35.39■■■■□ 3.26
FAAP20-207ENST00000420515 HEG1Q9ULI3 1381 aa35.39■■■■□ 3.26
FAAP20-207ENST00000420515 C4BP0C0L5 1744 aa35.38■■■■□ 3.26
FAAP20-207ENST00000420515 IL16Q14005 1332 aa35.38■■■■□ 3.25
FAAP20-207ENST00000420515 GNAI1P63096 354 aa35.38■■■■□ 3.25
FAAP20-207ENST00000420515 BABAM1Q9NWV8 329 aa35.38■■■■□ 3.25
FAAP20-207ENST00000420515 LAMB4A4D0S4 1761 aa35.38■■■■□ 3.25
FAAP20-207ENST00000420515 KRT24Q2M2I5 525 aa35.37■■■■□ 3.25
FAAP20-207ENST00000420515 SLC27A3Q5K4L6 730 aa35.37■■■■□ 3.25
FAAP20-207ENST00000420515 FMNL2Q96PY5 1086 aa35.37■■■■□ 3.25
FAAP20-207ENST00000420515 TUBGCP6Q96RT7 1819 aa35.37■■■■□ 3.25
FAAP20-207ENST00000420515 MYH14Q7Z406 1995 aaKnown RBP35.37■■■■□ 3.25
FAAP20-207ENST00000420515 LINC00116Q8NCU8 138 aa35.36■■■■□ 3.25
FAAP20-207ENST00000420515 DNAJC10Q8IXB1 793 aa35.35■■■■□ 3.25
FAAP20-207ENST00000420515 CDCA7LQ96GN5 454 aa35.34■■■■□ 3.25
FAAP20-207ENST00000420515 ANO8Q9HCE9 1232 aaPredicted RBP35.32■■■■□ 3.25
FAAP20-207ENST00000420515 FANCIQ9NVI1 1328 aa35.32■■■■□ 3.24
FAAP20-207ENST00000420515 GOLGA2Q08379 1002 aa35.31■■■■□ 3.24
FAAP20-207ENST00000420515 VSIG10Q8N0Z9 540 aa35.31■■■■□ 3.24
FAAP20-207ENST00000420515 UBR3Q6ZT12 1888 aa35.29■■■■□ 3.24
FAAP20-207ENST00000420515 GIGYF1O75420 1035 aaPredicted RBP35.28■■■■□ 3.24
FAAP20-207ENST00000420515 ZNF827Q17R98 1081 aa35.28■■■■□ 3.24
FAAP20-207ENST00000420515 ZBED9Q6R2W3 1325 aa35.28■■■■□ 3.24
FAAP20-207ENST00000420515 USP16Q9Y5T5 823 aa35.27■■■■□ 3.24
FAAP20-207ENST00000420515 YTHDC1Q96MU7 727 aaKnown RBP35.27■■■■□ 3.24
FAAP20-207ENST00000420515 SNRPA1P09661 255 aaKnown RBP35.26■■■■□ 3.23
FAAP20-207ENST00000420515 SLFN5Q08AF3 891 aa35.26■■■■□ 3.23
FAAP20-207ENST00000420515 CYP19A1P11511 503 aaPredicted RBP35.25■■■■□ 3.23
FAAP20-207ENST00000420515 C8orf58Q8NAV2 365 aa35.25■■■■□ 3.23
FAAP20-207ENST00000420515 AMIGO3Q86WK7 504 aa35.23■■■■□ 3.23
FAAP20-207ENST00000420515 TSPYL6Q8N831 410 aa35.23■■■■□ 3.23
FAAP20-207ENST00000420515 AKT1S1Q96B36 256 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms