RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	NLRP13	Q86W25	1043 aa		12.85	□□□□□ -0.35
NIF3L1-206	ENST00000416651	ZFP91	Q96JP5	570 aa	Predicted RBP	12.85	□□□□□ -0.35
NIF3L1-206	ENST00000416651	WDR17	Q8IZU2	1322 aa		12.85	□□□□□ -0.35
NIF3L1-206	ENST00000416651	COL24A1	Q17RW2	1714 aa		12.85	□□□□□ -0.35
NIF3L1-206	ENST00000416651	NHS	Q6T4R5	1651 aa		12.84	□□□□□ -0.35
NIF3L1-206	ENST00000416651	BTAF1	O14981	1849 aa		12.84	□□□□□ -0.35
NIF3L1-206	ENST00000416651	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.84	□□□□□ -0.35
NIF3L1-206	ENST00000416651	WWC3	Q9ULE0	1092 aa		12.84	□□□□□ -0.35
NIF3L1-206	ENST00000416651	NLRP6	P59044	892 aa		12.83	□□□□□ -0.36
NIF3L1-206	ENST00000416651	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.83	□□□□□ -0.36
NIF3L1-206	ENST00000416651	SLIT3	O75094	1523 aa		12.83	□□□□□ -0.36
NIF3L1-206	ENST00000416651	EXOC5	O00471	708 aa		12.82	□□□□□ -0.36
NIF3L1-206	ENST00000416651	DNAJC5G	Q8N7S2	189 aa		12.82	□□□□□ -0.36
NIF3L1-206	ENST00000416651	TAOK2	Q9UL54	1235 aa		12.82	□□□□□ -0.36
NIF3L1-206	ENST00000416651	KIF3C	O14782	793 aa		12.81	□□□□□ -0.36
NIF3L1-206	ENST00000416651	DCAF11	Q8TEB1	546 aa		12.81	□□□□□ -0.36
NIF3L1-206	ENST00000416651	ADCY9	O60503	1353 aa		12.81	□□□□□ -0.36
NIF3L1-206	ENST00000416651	USP6	P35125	1406 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	HTRA3	P83110	453 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	MSL1	Q68DK7	614 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	ANKRD13D	Q6ZTN6	518 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	CARD10	Q9BWT7	1032 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	KAT6B	Q8WYB5	2073 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	PIK3C2A	O00443	1686 aa		12.8	□□□□□ -0.36
NIF3L1-206	ENST00000416651	PPIP5K1	Q6PFW1	1433 aa		12.79	□□□□□ -0.36
NIF3L1-206	ENST00000416651	CSB-PGBD3	P0DP91	1061 aa		12.79	□□□□□ -0.36
NIF3L1-206	ENST00000416651	POLD1	P28340	1107 aa		12.79	□□□□□ -0.36
NIF3L1-206	ENST00000416651	ARHGEF25	Q86VW2	580 aa		12.79	□□□□□ -0.36
NIF3L1-206	ENST00000416651	TNS2	Q63HR2	1409 aa		12.79	□□□□□ -0.36
NIF3L1-206	ENST00000416651	KHSRP	Q92945	711 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
NIF3L1-206	ENST00000416651	CPSF1	Q10570	1443 aa	Known RBP	12.78	□□□□□ -0.36
NIF3L1-206	ENST00000416651	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.77	□□□□□ -0.37
NIF3L1-206	ENST00000416651	GRIN3B	O60391	1043 aa		12.77	□□□□□ -0.37
NIF3L1-206	ENST00000416651	SLC16A10	Q8TF71	515 aa		12.77	□□□□□ -0.37
NIF3L1-206	ENST00000416651	CABP1	Q9NZU7	370 aa		12.77	□□□□□ -0.37
NIF3L1-206	ENST00000416651	BRD4	O60885	1362 aa	Predicted RBP	12.77	□□□□□ -0.37
NIF3L1-206	ENST00000416651	QSER1	Q2KHR3	1735 aa		12.76	□□□□□ -0.37
NIF3L1-206	ENST00000416651	COL23A1	Q86Y22	540 aa	Predicted RBP	12.76	□□□□□ -0.37
NIF3L1-206	ENST00000416651	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.76	□□□□□ -0.37
NIF3L1-206	ENST00000416651	NBPF1	Q3BBV0	1214 aa		12.75	□□□□□ -0.37
NIF3L1-206	ENST00000416651	TRPM1	Q7Z4N2	1603 aa		12.75	□□□□□ -0.37
NIF3L1-206	ENST00000416651	TFCP2L1	Q9NZI6	479 aa		12.75	□□□□□ -0.37
NIF3L1-206	ENST00000416651	SRPK2	P78362	688 aa	Known RBP	12.74	□□□□□ -0.37
NIF3L1-206	ENST00000416651	SMIM5	Q71RC9	77 aa		12.74	□□□□□ -0.37
NIF3L1-206	ENST00000416651	ABCC6	O95255	1503 aa		12.73	□□□□□ -0.37
NIF3L1-206	ENST00000416651	ECM2	O94769	699 aa	Predicted RBP	12.73	□□□□□ -0.37
NIF3L1-206	ENST00000416651	NFAT5	O94916	1531 aa		12.72	□□□□□ -0.37
NIF3L1-206	ENST00000416651	LSM11	P83369	360 aa	Known RBP eCLIP	12.71	□□□□□ -0.37
NIF3L1-206	ENST00000416651	NLRP2	Q9NX02	1062 aa		12.71	□□□□□ -0.37
NIF3L1-206	ENST00000416651	NSD2	O96028	1365 aa		12.7	□□□□□ -0.38
NIF3L1-206	ENST00000416651	CCDC7	Q96M83	1385 aa		12.7	□□□□□ -0.38
NIF3L1-206	ENST00000416651	TTC21B	Q7Z4L5	1316 aa		12.7	□□□□□ -0.38
NIF3L1-206	ENST00000416651	APLP1	P51693	650 aa		12.7	□□□□□ -0.38
NIF3L1-206	ENST00000416651	AMIGO3	Q86WK7	504 aa		12.7	□□□□□ -0.38
NIF3L1-206	ENST00000416651	DDX54	Q8TDD1	881 aa	Known RBP	12.7	□□□□□ -0.38
NIF3L1-206	ENST00000416651	PRIM1	P49642	420 aa	Known RBP	12.69	□□□□□ -0.38
NIF3L1-206	ENST00000416651	FBXO22	Q8NEZ5	403 aa		12.69	□□□□□ -0.38
NIF3L1-206	ENST00000416651	IL2RB	P14784	551 aa		12.68	□□□□□ -0.38
NIF3L1-206	ENST00000416651	PRELP	P51888	382 aa		12.68	□□□□□ -0.38
NIF3L1-206	ENST00000416651	SLC27A3	Q5K4L6	730 aa		12.68	□□□□□ -0.38
NIF3L1-206	ENST00000416651	SYTL4	Q96C24	671 aa	Predicted RBP	12.68	□□□□□ -0.38
NIF3L1-206	ENST00000416651	NMRK2	Q9NPI5	230 aa		12.68	□□□□□ -0.38
NIF3L1-206	ENST00000416651	LY75	O60449	1722 aa		12.68	□□□□□ -0.38
NIF3L1-206	ENST00000416651	TNS4	Q8IZW8	715 aa		12.67	□□□□□ -0.38
NIF3L1-206	ENST00000416651	STK24	Q9Y6E0	443 aa		12.67	□□□□□ -0.38
NIF3L1-206	ENST00000416651	WDR90	Q96KV7	1748 aa		12.67	□□□□□ -0.38
NIF3L1-206	ENST00000416651	IGSF1	Q8N6C5	1336 aa		12.66	□□□□□ -0.38
NIF3L1-206	ENST00000416651	DOT1L	Q8TEK3	1739 aa		12.65	□□□□□ -0.38
NIF3L1-206	ENST00000416651	CCNL1	Q9UK58	526 aa	Predicted RBP	12.65	□□□□□ -0.38
NIF3L1-206	ENST00000416651	CD2AP	Q9Y5K6	639 aa		12.65	□□□□□ -0.38
NIF3L1-206	ENST00000416651	QRICH2	Q9H0J4	1663 aa		12.64	□□□□□ -0.39
NIF3L1-206	ENST00000416651	NUDT7	P0C024	238 aa		12.64	□□□□□ -0.39
NIF3L1-206	ENST00000416651	ANKRD24	Q8TF21	1146 aa		12.64	□□□□□ -0.39
NIF3L1-206	ENST00000416651	KLRG1	Q96E93	195 aa		12.64	□□□□□ -0.39
NIF3L1-206	ENST00000416651	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.63	□□□□□ -0.39
NIF3L1-206	ENST00000416651	STK25	O00506	426 aa		12.63	□□□□□ -0.39
NIF3L1-206	ENST00000416651	JMY	Q8N9B5	988 aa		12.63	□□□□□ -0.39
NIF3L1-206	ENST00000416651	KCNH5	Q8NCM2	988 aa		12.63	□□□□□ -0.39
NIF3L1-206	ENST00000416651	C2orf72	A6NCS6	295 aa		12.62	□□□□□ -0.39
NIF3L1-206	ENST00000416651	RGL2	O15211	777 aa		12.62	□□□□□ -0.39
NIF3L1-206	ENST00000416651	TOMM70	O94826	608 aa		12.62	□□□□□ -0.39
NIF3L1-206	ENST00000416651	NME9	Q86XW9	330 aa		12.61	□□□□□ -0.39
NIF3L1-206	ENST00000416651	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.61	□□□□□ -0.39
NIF3L1-206	ENST00000416651	LTV1	Q96GA3	475 aa	Predicted RBP	12.61	□□□□□ -0.39
NIF3L1-206	ENST00000416651	TOGARAM1	Q9Y4F4	1720 aa		12.61	□□□□□ -0.39
NIF3L1-206	ENST00000416651	LTN1	O94822	1766 aa		12.61	□□□□□ -0.39
NIF3L1-206	ENST00000416651	PCNT	O95613	3336 aa		12.6	□□□□□ -0.39
NIF3L1-206	ENST00000416651	ANKRD36B	Q8N2N9	1353 aa		12.6	□□□□□ -0.39
NIF3L1-206	ENST00000416651	FBLN1	P23142	703 aa		12.6	□□□□□ -0.39
NIF3L1-206	ENST00000416651	PBX2	P40425	430 aa		12.6	□□□□□ -0.39
NIF3L1-206	ENST00000416651	MFRP	Q9BY79	579 aa		12.6	□□□□□ -0.39
NIF3L1-206	ENST00000416651	RAB3GAP2	Q9H2M9	1393 aa		12.59	□□□□□ -0.39
NIF3L1-206	ENST00000416651	USP54	Q70EL1	1684 aa		12.59	□□□□□ -0.39
NIF3L1-206	ENST00000416651	LHX6	Q9UPM6	363 aa		12.59	□□□□□ -0.39
NIF3L1-206	ENST00000416651	RGPD2	P0DJD1	1756 aa		12.58	□□□□□ -0.39
NIF3L1-206	ENST00000416651	C5	P01031	1676 aa		12.58	□□□□□ -0.4
NIF3L1-206	ENST00000416651	SLC34A2	O95436	690 aa		12.58	□□□□□ -0.4
NIF3L1-206	ENST00000416651	POTEE	Q6S8J3	1075 aa		12.58	□□□□□ -0.4
NIF3L1-206	ENST00000416651	CIC	Q96RK0	1608 aa	Predicted RBP	12.58	□□□□□ -0.4
NIF3L1-206	ENST00000416651	KIAA1551	Q9HCM1	1747 aa		12.57	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms