RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 CCDC125Q86Z20 511 aa40.24■■■■■ 4.03
CSNK1E-206ENST00000413574 SALL2Q9Y467 1007 aaPredicted RBP40.24■■■■■ 4.03
CSNK1E-206ENST00000413574 TEFQ10587 303 aa40.22■■■■■ 4.03
CSNK1E-206ENST00000413574 DEFB132Q7Z7B7 95 aa40.2■■■■■ 4.03
CSNK1E-206ENST00000413574 LMOD3Q0VAK6 560 aa40.2■■■■■ 4.03
CSNK1E-206ENST00000413574 ASAP1Q9ULH1 1129 aa40.19■■■■■ 4.02
CSNK1E-206ENST00000413574 EN1Q05925 392 aaPredicted RBP40.16■■■■■ 4.02
CSNK1E-206ENST00000413574 SOCS7O14512 581 aa40.15■■■■■ 4.02
CSNK1E-206ENST00000413574 ATG3Q9NT62 314 aa40.15■■■■■ 4.02
CSNK1E-206ENST00000413574 BAG6P46379 1132 aa40.14■■■■■ 4.02
CSNK1E-206ENST00000413574 SLC39A6Q13433 755 aa40.13■■■■■ 4.02
CSNK1E-206ENST00000413574 PAPPAQ13219 1627 aa40.12■■■■■ 4.01
CSNK1E-206ENST00000413574 PLSCR1O15162 318 aa40.11■■■■■ 4.01
CSNK1E-206ENST00000413574 MIS18AQ9NYP9 233 aa40.11■■■■■ 4.01
CSNK1E-206ENST00000413574 LY75O60449 1722 aa40.11■■■■■ 4.01
CSNK1E-206ENST00000413574 EZH2Q15910 746 aaKnown RBP40.1■■■■■ 4.01
CSNK1E-206ENST00000413574 PALLDQ8WX93 1383 aa40.1■■■■■ 4.01
CSNK1E-206ENST00000413574 TAF7Q15545 349 aaPredicted RBP40.09■■■■■ 4.01
CSNK1E-206ENST00000413574 BTBD11A6QL63 1104 aa40.09■■■■■ 4.01
CSNK1E-206ENST00000413574 WWC1Q8IX03 1113 aa40.09■■■■■ 4.01
CSNK1E-206ENST00000413574 CAMKK2Q96RR4 588 aa40.09■■■■■ 4.01
CSNK1E-206ENST00000413574 RGPD3A6NKT7 1758 aaPredicted RBP40.08■■■■■ 4.01
CSNK1E-206ENST00000413574 RGPD4Q7Z3J3 1758 aa40.08■■■■■ 4.01
CSNK1E-206ENST00000413574 CCDC27Q2M243 656 aa40.08■■■■■ 4.01
CSNK1E-206ENST00000413574 PROM2Q8N271 834 aa40.06■■■■■ 4
CSNK1E-206ENST00000413574 SMARCC1Q92922 1105 aaPredicted RBP40.05■■■■■ 4
CSNK1E-206ENST00000413574 KCNQ3O43525 872 aa40.05■■■■■ 4
CSNK1E-206ENST00000413574 KCNQ4P56696 695 aa40.05■■■■■ 4
CSNK1E-206ENST00000413574 NCBP3Q53F19 620 aaKnown RBP40.04■■■■■ 4
CSNK1E-206ENST00000413574 PTCD1O75127 700 aaKnown RBP40.02■■■■■ 4
CSNK1E-206ENST00000413574 TXNRD1Q16881 649 aa40.02■■■■■ 4
CSNK1E-206ENST00000413574 LAS1LQ9Y4W2 734 aaKnown RBP40.02■■■■■ 4
CSNK1E-206ENST00000413574 KDM3BQ7LBC6 1761 aa40.02■■■■■ 4
CSNK1E-206ENST00000413574 UBR2Q8IWV8 1755 aa40.02■■■■■ 4
CSNK1E-206ENST00000413574 ZNF790Q6PG37 636 aa40.02■■■■■ 4
CSNK1E-206ENST00000413574 RBM42Q9BTD8 480 aaKnown RBP40.02■■■■■ 4
CSNK1E-206ENST00000413574 RREB1Q92766 1687 aa40■■■■□ 3.99
CSNK1E-206ENST00000413574 KCPQ6ZWJ8 1503 aa40■■■■□ 3.99
CSNK1E-206ENST00000413574 TTC5Q8N0Z6 440 aa39.98■■■■□ 3.99
CSNK1E-206ENST00000413574 LRRC4BQ9NT99 713 aa39.98■■■■□ 3.99
CSNK1E-206ENST00000413574 LOC102724428A0A0B4J2F2 783 aa39.98■■■■□ 3.99
CSNK1E-206ENST00000413574 SIK1P57059 783 aa39.98■■■■□ 3.99
CSNK1E-206ENST00000413574 SLC4A9Q96Q91 983 aa39.98■■■■□ 3.99
CSNK1E-206ENST00000413574 NGEFQ8N5V2 710 aa39.97■■■■□ 3.99
CSNK1E-206ENST00000413574 CCNL1Q9UK58 526 aaPredicted RBP39.97■■■■□ 3.99
CSNK1E-206ENST00000413574 TSPYL4Q9UJ04 414 aa39.96■■■■□ 3.99
CSNK1E-206ENST00000413574 HNRNPUQ00839 825 aaKnown RBP eCLIP39.94■■■■□ 3.99
CSNK1E-206ENST00000413574 ZNF496Q96IT1 587 aaPredicted RBP39.94■■■■□ 3.99
CSNK1E-206ENST00000413574 NUP188Q5SRE5 1749 aa39.94■■■■□ 3.98
CSNK1E-206ENST00000413574 CALD1Q05682 793 aaKnown RBP39.94■■■■□ 3.98
CSNK1E-206ENST00000413574 CHL1O00533 1208 aa39.93■■■■□ 3.98
CSNK1E-206ENST00000413574 CFAP44Q96MT7 982 aa39.93■■■■□ 3.98
CSNK1E-206ENST00000413574 ZNF521Q96K83 1311 aa39.92■■■■□ 3.98
CSNK1E-206ENST00000413574 TAF1LQ8IZX4 1826 aa39.92■■■■□ 3.98
CSNK1E-206ENST00000413574 ZNF853P0CG23 659 aa39.91■■■■□ 3.98
CSNK1E-206ENST00000413574 ATP6V1AP38606 617 aa39.91■■■■□ 3.98
CSNK1E-206ENST00000413574 SLC27A3Q5K4L6 730 aa39.91■■■■□ 3.98
CSNK1E-206ENST00000413574 IFT57Q9NWB7 429 aa39.91■■■■□ 3.98
CSNK1E-206ENST00000413574 ITPK1Q13572 414 aa39.9■■■■□ 3.98
CSNK1E-206ENST00000413574 WDR63Q8IWG1 891 aa39.9■■■■□ 3.98
CSNK1E-206ENST00000413574 TJP1Q07157 1748 aa39.89■■■■□ 3.98
CSNK1E-206ENST00000413574 C5P01031 1676 aa39.88■■■■□ 3.98
CSNK1E-206ENST00000413574 GNAI1P63096 354 aa39.88■■■■□ 3.97
CSNK1E-206ENST00000413574 MBIPQ9NS73 344 aa39.88■■■■□ 3.97
CSNK1E-206ENST00000413574 BABAM1Q9NWV8 329 aa39.88■■■■□ 3.97
CSNK1E-206ENST00000413574 ZNF831Q5JPB2 1677 aa39.88■■■■□ 3.97
CSNK1E-206ENST00000413574 FMNL2Q96PY5 1086 aa39.87■■■■□ 3.97
CSNK1E-206ENST00000413574 SPINK5Q9NQ38 1064 aaPredicted RBP39.87■■■■□ 3.97
CSNK1E-206ENST00000413574 EIF4A1P60842 406 aaKnown RBP39.86■■■■□ 3.97
CSNK1E-206ENST00000413574 IL16Q14005 1332 aa39.85■■■■□ 3.97
CSNK1E-206ENST00000413574 HEG1Q9ULI3 1381 aa39.85■■■■□ 3.97
CSNK1E-206ENST00000413574 TSR2Q969E8 191 aaKnown RBP39.84■■■■□ 3.97
CSNK1E-206ENST00000413574 COL5A3P25940 1745 aaPredicted RBP39.83■■■■□ 3.97
CSNK1E-206ENST00000413574 PRAMEF22A3QJZ6 481 aa39.83■■■■□ 3.97
CSNK1E-206ENST00000413574 DNAJC10Q8IXB1 793 aa39.83■■■■□ 3.97
CSNK1E-206ENST00000413574 LINC00116Q8NCU8 138 aa39.83■■■■□ 3.97
CSNK1E-206ENST00000413574 KRT24Q2M2I5 525 aa39.81■■■■□ 3.96
CSNK1E-206ENST00000413574 CICQ96RK0 1608 aaPredicted RBP39.81■■■■□ 3.96
CSNK1E-206ENST00000413574 VSIG10Q8N0Z9 540 aa39.8■■■■□ 3.96
CSNK1E-206ENST00000413574 C4BP0C0L5 1744 aa39.78■■■■□ 3.96
CSNK1E-206ENST00000413574 ANO8Q9HCE9 1232 aaPredicted RBP39.78■■■■□ 3.96
CSNK1E-206ENST00000413574 GOLGA2Q08379 1002 aa39.77■■■■□ 3.96
CSNK1E-206ENST00000413574 CDCA7LQ96GN5 454 aa39.76■■■■□ 3.96
CSNK1E-206ENST00000413574 MYH14Q7Z406 1995 aaKnown RBP39.75■■■■□ 3.95
CSNK1E-206ENST00000413574 SNRPA1P09661 255 aaKnown RBP39.75■■■■□ 3.95
CSNK1E-206ENST00000413574 FANCIQ9NVI1 1328 aa39.74■■■■□ 3.95
CSNK1E-206ENST00000413574 GIGYF1O75420 1035 aaPredicted RBP39.74■■■■□ 3.95
CSNK1E-206ENST00000413574 ZNF827Q17R98 1081 aa39.74■■■■□ 3.95
CSNK1E-206ENST00000413574 USP16Q9Y5T5 823 aa39.74■■■■□ 3.95
CSNK1E-206ENST00000413574 CYP19A1P11511 503 aaPredicted RBP39.72■■■■□ 3.95
CSNK1E-206ENST00000413574 LAMB4A4D0S4 1761 aa39.71■■■■□ 3.95
CSNK1E-206ENST00000413574 AKT1S1Q96B36 256 aa39.7■■■■□ 3.95
CSNK1E-206ENST00000413574 TUBGCP6Q96RT7 1819 aa39.7■■■■□ 3.95
CSNK1E-206ENST00000413574 ELL2O00472 640 aaPredicted RBP39.69■■■■□ 3.94
CSNK1E-206ENST00000413574 CRKLP46109 303 aaKnown RBP39.69■■■■□ 3.94
CSNK1E-206ENST00000413574 SLFN5Q08AF3 891 aa39.69■■■■□ 3.94
CSNK1E-206ENST00000413574 C8orf58Q8NAV2 365 aa39.69■■■■□ 3.94
CSNK1E-206ENST00000413574 YTHDC1Q96MU7 727 aaKnown RBP39.69■■■■□ 3.94
CSNK1E-206ENST00000413574 MYH16Q9H6N6 1097 aa39.69■■■■□ 3.94
CSNK1E-206ENST00000413574 ZBED9Q6R2W3 1325 aa39.68■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms