RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 GSPT1P15170 499 aaKnown RBP16.15■□□□□ 0.18
CLINT1-201ENST00000411809 ANKRD45Q5TZF3 282 aa16.15■□□□□ 0.18
CLINT1-201ENST00000411809 MAP3K5Q99683 1374 aa16.14■□□□□ 0.18
CLINT1-201ENST00000411809 GAS2L2Q8NHY3 880 aa16.14■□□□□ 0.17
CLINT1-201ENST00000411809 NCLP19338 710 aaKnown RBP16.13■□□□□ 0.17
CLINT1-201ENST00000411809 PLEKHM2Q8IWE5 1019 aa16.13■□□□□ 0.17
CLINT1-201ENST00000411809 SNX21Q969T3 373 aa16.13■□□□□ 0.17
CLINT1-201ENST00000411809 COL18A1P39060 1754 aa16.13■□□□□ 0.17
CLINT1-201ENST00000411809 OVOS2A0A0G2JMS6 1433 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 NPHP4O75161 1426 aaPredicted RBP16.12■□□□□ 0.17
CLINT1-201ENST00000411809 NLRP6P59044 892 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
CLINT1-201ENST00000411809 IL17REQ8NFR9 667 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 ABCC6O95255 1503 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 G2E3Q7L622 706 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 ZMYND15Q9H091 742 aa16.12■□□□□ 0.17
CLINT1-201ENST00000411809 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
CLINT1-201ENST00000411809 SALL3Q9BXA9 1300 aa16.11■□□□□ 0.17
CLINT1-201ENST00000411809 SSFA2P28290 1259 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 TBC1D9Q6ZT07 1266 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 PHF8Q9UPP1 1060 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 GNAT3A8MTJ3 354 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 AMPHP49418 695 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 IP6K1Q92551 441 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 MEIS3Q99687 375 aa16.1■□□□□ 0.17
CLINT1-201ENST00000411809 ANKLE2Q86XL3 938 aa16.09■□□□□ 0.17
CLINT1-201ENST00000411809 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
CLINT1-201ENST00000411809 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.16
CLINT1-201ENST00000411809 SCN11AQ9UI33 1791 aa16.08■□□□□ 0.16
CLINT1-201ENST00000411809 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
CLINT1-201ENST00000411809 TTC22Q5TAA0 569 aa16.07■□□□□ 0.16
CLINT1-201ENST00000411809 PXDNQ92626 1479 aa16.07■□□□□ 0.16
CLINT1-201ENST00000411809 ABTB2Q8N961 1025 aa16.07■□□□□ 0.16
CLINT1-201ENST00000411809 SOX12O15370 315 aa16.07■□□□□ 0.16
CLINT1-201ENST00000411809 OSBPL3Q9H4L5 887 aa16.07■□□□□ 0.16
CLINT1-201ENST00000411809 HEG1Q9ULI3 1381 aa16.07■□□□□ 0.16
CLINT1-201ENST00000411809 APBB1O00213 710 aa16.06■□□□□ 0.16
CLINT1-201ENST00000411809 XIRP1Q702N8 1843 aaKnown RBP16.06■□□□□ 0.16
CLINT1-201ENST00000411809 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
CLINT1-201ENST00000411809 C5P01031 1676 aa16.05■□□□□ 0.16
CLINT1-201ENST00000411809 NASPP49321 788 aaPredicted RBP16.05■□□□□ 0.16
CLINT1-201ENST00000411809 RAB3GAP1Q15042 981 aa16.05■□□□□ 0.16
CLINT1-201ENST00000411809 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
CLINT1-201ENST00000411809 C16orf71Q8IYS4 520 aaPredicted RBP16.04■□□□□ 0.16
CLINT1-201ENST00000411809 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
CLINT1-201ENST00000411809 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
CLINT1-201ENST00000411809 NBPF6Q5VWK0 638 aa16.04■□□□□ 0.16
CLINT1-201ENST00000411809 NBPF4Q96M43 638 aa16.04■□□□□ 0.16
CLINT1-201ENST00000411809 GLI3P10071 1580 aa16.04■□□□□ 0.16
CLINT1-201ENST00000411809 RBM10P98175 930 aaKnown RBP16.04■□□□□ 0.16
CLINT1-201ENST00000411809 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
CLINT1-201ENST00000411809 NUTM2GQ5VZR2 741 aa16.03■□□□□ 0.16
CLINT1-201ENST00000411809 OTUD7AQ8TE49 926 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-201ENST00000411809 ANP32BQ92688 251 aaKnown RBP16.03■□□□□ 0.16
CLINT1-201ENST00000411809 K7ELQ4 463 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-201ENST00000411809 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-201ENST00000411809 FOXD4L5Q5VV16 416 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-201ENST00000411809 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
CLINT1-201ENST00000411809 FOXD4L4Q8WXT5 416 aaPredicted RBP16.03■□□□□ 0.16
CLINT1-201ENST00000411809 GOLGA6L22H0YM25 854 aa16.02■□□□□ 0.16
CLINT1-201ENST00000411809 CDC45O75419 566 aa16.02■□□□□ 0.16
CLINT1-201ENST00000411809 FLIIQ13045 1269 aa16.02■□□□□ 0.16
CLINT1-201ENST00000411809 C1orf167Q5SNV9 1468 aa16.02■□□□□ 0.15
CLINT1-201ENST00000411809 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.15
CLINT1-201ENST00000411809 F6X3S4 739 aa16.01■□□□□ 0.15
CLINT1-201ENST00000411809 CAVIN1Q6NZI2 390 aaKnown RBP16.01■□□□□ 0.15
CLINT1-201ENST00000411809 ARHGEF25Q86VW2 580 aa16.01■□□□□ 0.15
CLINT1-201ENST00000411809 PARP4Q9UKK3 1724 aaKnown RBP16.01■□□□□ 0.15
CLINT1-201ENST00000411809 SKOR2Q2VWA4 1001 aaPredicted RBP16■□□□□ 0.15
CLINT1-201ENST00000411809 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
CLINT1-201ENST00000411809 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
CLINT1-201ENST00000411809 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
CLINT1-201ENST00000411809 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
CLINT1-201ENST00000411809 HOXB7P09629 217 aa16■□□□□ 0.15
CLINT1-201ENST00000411809 AK9Q5TCS8 1911 aa15.99■□□□□ 0.15
CLINT1-201ENST00000411809 MRC1P22897 1456 aa15.99■□□□□ 0.15
CLINT1-201ENST00000411809 PKP1Q13835 747 aa15.99■□□□□ 0.15
CLINT1-201ENST00000411809 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
CLINT1-201ENST00000411809 EIF4A1P60842 406 aaKnown RBP15.99■□□□□ 0.15
CLINT1-201ENST00000411809 CIZ1Q9ULV3 898 aaPredicted RBP15.99■□□□□ 0.15
CLINT1-201ENST00000411809 IL17RAQ96F46 866 aa15.99■□□□□ 0.15
CLINT1-201ENST00000411809 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
CLINT1-201ENST00000411809 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
CLINT1-201ENST00000411809 BAG4O95429 457 aaKnown RBP15.98■□□□□ 0.15
CLINT1-201ENST00000411809 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
CLINT1-201ENST00000411809 DCCP43146 1447 aa15.98■□□□□ 0.15
CLINT1-201ENST00000411809 SDSP20132 328 aa15.98■□□□□ 0.15
CLINT1-201ENST00000411809 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
CLINT1-201ENST00000411809 USP44Q9H0E7 712 aa15.97■□□□□ 0.15
CLINT1-201ENST00000411809 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
CLINT1-201ENST00000411809 ATP8B2P98198 1209 aa15.97■□□□□ 0.15
CLINT1-201ENST00000411809 RBM33Q96EV2 1170 aaKnown RBP15.97■□□□□ 0.15
CLINT1-201ENST00000411809 ISY1Q9ULR0 285 aaKnown RBP15.97■□□□□ 0.15
CLINT1-201ENST00000411809 GNAI2P04899 355 aa15.96■□□□□ 0.15
CLINT1-201ENST00000411809 LGR6Q9HBX8 967 aa15.96■□□□□ 0.15
CLINT1-201ENST00000411809 R3HCC1Q9Y3T6 440 aaKnown RBP15.96■□□□□ 0.15
CLINT1-201ENST00000411809 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
CLINT1-201ENST00000411809 ORAI2Q96SN7 254 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms