RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 MLH3Q9UHC1 1453 aa19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 MBD3O95983 291 aa19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 CDC5LQ99459 802 aaKnown RBP19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 TRMT112Q9UI30 125 aaKnown RBP19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 LRP2BPQ9P2M1 347 aa19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 NCKAP5LQ9HCH0 1330 aa19.98■□□□□ 0.79
PCDHA13-202ENST00000409494 HSP90AB2PQ58FF8 381 aa19.97■□□□□ 0.79
PCDHA13-202ENST00000409494 LETM1O95202 739 aaPredicted RBP19.97■□□□□ 0.79
PCDHA13-202ENST00000409494 IPO7O95373 1038 aaKnown RBP19.97■□□□□ 0.79
PCDHA13-202ENST00000409494 FKBP4Q02790 459 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCDHA13-202ENST00000409494 SASS6Q6UVJ0 657 aa19.97■□□□□ 0.79
PCDHA13-202ENST00000409494 POLKQ9UBT6 870 aa19.97■□□□□ 0.79
PCDHA13-202ENST00000409494 IL2RBP14784 551 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 BLOC1S2Q6QNY1 142 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 CWC25Q9NXE8 425 aaPredicted RBP19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 EDC4Q6P2E9 1401 aaKnown RBP19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 PES1O00541 588 aaKnown RBP19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 SLC5A1P13866 664 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 AK7Q96M32 723 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 ADGBQ8N7X0 1667 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 GCP02774 474 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 C20orf194Q5TEA3 1177 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 IP6K1Q92551 441 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 RAI14Q9P0K7 980 aa19.96■□□□□ 0.79
PCDHA13-202ENST00000409494 TXLNAP40222 546 aa19.95■□□□□ 0.78
PCDHA13-202ENST00000409494 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
PCDHA13-202ENST00000409494 CHRNA2Q15822 529 aa19.95■□□□□ 0.78
PCDHA13-202ENST00000409494 NAT10Q9H0A0 1025 aaKnown RBP19.95■□□□□ 0.78
PCDHA13-202ENST00000409494 MX1P20591 662 aa19.94■□□□□ 0.78
PCDHA13-202ENST00000409494 FAM43AQ8N2R8 423 aa19.94■□□□□ 0.78
PCDHA13-202ENST00000409494 DDB1Q16531 1140 aa19.94■□□□□ 0.78
PCDHA13-202ENST00000409494 BICDL1Q6ZP65 573 aa19.94■□□□□ 0.78
PCDHA13-202ENST00000409494 EIF4A2Q14240 407 aaKnown RBP19.94■□□□□ 0.78
PCDHA13-202ENST00000409494 MBIPQ9NS73 344 aa19.94■□□□□ 0.78
PCDHA13-202ENST00000409494 ARHGEF10O15013 1369 aa19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 CCDC69A6NI79 296 aa19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 WASF1Q92558 559 aa19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 U3KPZ7 1027 aaPredicted RBP19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 LMTK3Q96Q04 1460 aa19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 TDO2P48775 406 aa19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 MAP3K12Q12852 859 aa19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 RRP12Q5JTH9 1297 aaKnown RBP19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 RPGRQ92834 1020 aaKnown RBP19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 PPP1R1BQ9UD71 204 aaPredicted RBP19.93■□□□□ 0.78
PCDHA13-202ENST00000409494 IMMTQ16891 758 aaKnown RBP19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 AIDAQ96BJ3 306 aa19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 DCAF5Q96JK2 942 aa19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 MBD5Q9P267 1494 aa19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 UBAC1Q9BSL1 405 aa19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 COL17A1Q9UMD9 1497 aaPredicted RBP19.92■□□□□ 0.78
PCDHA13-202ENST00000409494 ANKRD13DQ6ZTN6 518 aa19.91■□□□□ 0.78
PCDHA13-202ENST00000409494 LDHCP07864 332 aa19.91■□□□□ 0.78
PCDHA13-202ENST00000409494 IL1RAPL2Q9NP60 686 aa19.91■□□□□ 0.78
PCDHA13-202ENST00000409494 PIP4K2AP48426 406 aaPredicted RBP19.91■□□□□ 0.78
PCDHA13-202ENST00000409494 NASPP49321 788 aaPredicted RBP19.91■□□□□ 0.78
PCDHA13-202ENST00000409494 TTF1Q15361 905 aaPredicted RBP19.91■□□□□ 0.78
PCDHA13-202ENST00000409494 CIZ1Q9ULV3 898 aaPredicted RBP19.9■□□□□ 0.78
PCDHA13-202ENST00000409494 A0A1W2PP64 1363 aa19.9■□□□□ 0.78
PCDHA13-202ENST00000409494 PLEKHG3A1L390 1219 aa19.9■□□□□ 0.78
PCDHA13-202ENST00000409494 CCAR1Q8IX12 1150 aaKnown RBP19.9■□□□□ 0.78
PCDHA13-202ENST00000409494 EXOC6BQ9Y2D4 811 aa19.9■□□□□ 0.78
PCDHA13-202ENST00000409494 SOGA3Q5TF21 947 aa19.9■□□□□ 0.78
PCDHA13-202ENST00000409494 WDR33Q9C0J8 1336 aaKnown RBP19.89■□□□□ 0.78
PCDHA13-202ENST00000409494 HMGB1P09429 215 aaKnown RBP19.89■□□□□ 0.78
PCDHA13-202ENST00000409494 HSPA2P54652 639 aa19.89■□□□□ 0.78
PCDHA13-202ENST00000409494 OLFM4Q6UX06 510 aa19.89■□□□□ 0.78
PCDHA13-202ENST00000409494 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.89■□□□□ 0.78
PCDHA13-202ENST00000409494 IDH1O75874 414 aaKnown RBP19.89■□□□□ 0.77
PCDHA13-202ENST00000409494 TRIM27P14373 513 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 RBM5P52756 815 aaKnown RBP eCLIP19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 SDF4Q9BRK5 362 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 MAP3K2Q9Y2U5 619 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 SKAP1Q86WV1 359 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 NOC3LQ8WTT2 800 aaKnown RBP19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 NOL7Q9UMY1 257 aaKnown RBP19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 SBNO1A3KN83 1393 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 RFC4P35249 363 aa19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 DDX46Q7L014 1031 aaKnown RBP19.88■□□□□ 0.77
PCDHA13-202ENST00000409494 PCDH11XQ9BZA7 1347 aa19.87■□□□□ 0.77
PCDHA13-202ENST00000409494 PCDH11YQ9BZA8 1340 aa19.87■□□□□ 0.77
PCDHA13-202ENST00000409494 LRRFIP2Q9Y608 721 aaKnown RBP19.87■□□□□ 0.77
PCDHA13-202ENST00000409494 RNF41Q9H4P4 317 aaPredicted RBP19.87■□□□□ 0.77
PCDHA13-202ENST00000409494 MAP3K5Q99683 1374 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 SPTY2D1Q68D10 685 aaPredicted RBP19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 KINO60870 393 aaKnown RBP19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 KDM5DQ9BY66 1539 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 CCDC196A0A1B0GTZ2 297 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 UQCRFS1P1P0C7P4 283 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 DHX8Q14562 1220 aaKnown RBP19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 PI4KAP2A4QPH2 592 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 K7ELQ4 463 aaPredicted RBP19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 PI4KAP1Q8N8J0 262 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 ECHDC1Q9NTX5 307 aa19.86■□□□□ 0.77
PCDHA13-202ENST00000409494 HOXC9P31274 260 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms